RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 FTSJ3Q8IY81 847 aaKnown RBP27.48■■□□□ 1.99
SCARB1-206ENST00000539320 HOOK2Q96ED9 719 aa27.48■■□□□ 1.99
SCARB1-206ENST00000539320 XAGE2Q96GT9 111 aa27.48■■□□□ 1.99
SCARB1-206ENST00000539320 CSADQ9Y600 493 aa27.48■■□□□ 1.99
SCARB1-206ENST00000539320 R3HDMLQ9H3Y0 253 aa27.47■■□□□ 1.99
SCARB1-206ENST00000539320 CDC42EP5Q6NZY7 148 aa27.46■■□□□ 1.99
SCARB1-206ENST00000539320 FKTNO75072 461 aa27.45■■□□□ 1.98
SCARB1-206ENST00000539320 G3BP1Q13283 466 aaKnown RBP eCLIP27.45■■□□□ 1.98
SCARB1-206ENST00000539320 DCAF15Q66K64 600 aa27.45■■□□□ 1.98
SCARB1-206ENST00000539320 WRNIP1Q96S55 665 aa27.45■■□□□ 1.98
SCARB1-206ENST00000539320 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.45■■□□□ 1.98
SCARB1-206ENST00000539320 OTUD7BQ6GQQ9 843 aa27.44■■□□□ 1.98
SCARB1-206ENST00000539320 FAM151AQ8WW52 585 aa27.44■■□□□ 1.98
SCARB1-206ENST00000539320 CNKSR2Q8WXI2 1034 aa27.44■■□□□ 1.98
SCARB1-206ENST00000539320 TESPA1A2RU30 521 aaPredicted RBP27.43■■□□□ 1.98
SCARB1-206ENST00000539320 DZIP1Q86YF9 867 aaKnown RBP27.43■■□□□ 1.98
SCARB1-206ENST00000539320 ITPRIPQ8IWB1 547 aa27.43■■□□□ 1.98
SCARB1-206ENST00000539320 NEUROD6Q96NK8 337 aa27.43■■□□□ 1.98
SCARB1-206ENST00000539320 MYH2Q9UKX2 1941 aa27.43■■□□□ 1.98
SCARB1-206ENST00000539320 GAKO14976 1311 aa27.42■■□□□ 1.98
SCARB1-206ENST00000539320 NFIAQ12857 509 aa27.42■■□□□ 1.98
SCARB1-206ENST00000539320 PKN2Q16513 984 aaKnown RBP27.42■■□□□ 1.98
SCARB1-206ENST00000539320 OTUD5Q96G74 571 aa27.42■■□□□ 1.98
SCARB1-206ENST00000539320 ABCF2Q9UG63 623 aa27.42■■□□□ 1.98
SCARB1-206ENST00000539320 SNCAIPQ9Y6H5 919 aa27.42■■□□□ 1.98
SCARB1-206ENST00000539320 SPDYE5A6NIY4 337 aa27.41■■□□□ 1.98
SCARB1-206ENST00000539320 TCP10Q12799 353 aa27.41■■□□□ 1.98
SCARB1-206ENST00000539320 POLA2Q14181 598 aa27.41■■□□□ 1.98
SCARB1-206ENST00000539320 MS4A4AQ96JQ5 239 aa27.41■■□□□ 1.98
SCARB1-206ENST00000539320 ZNF341Q9BYN7 854 aa27.41■■□□□ 1.98
SCARB1-206ENST00000539320 USP40Q9NVE5 1235 aa27.41■■□□□ 1.98
SCARB1-206ENST00000539320 RLBP1P12271 317 aa27.4■■□□□ 1.98
SCARB1-206ENST00000539320 GORABQ5T7V8 394 aa27.4■■□□□ 1.98
SCARB1-206ENST00000539320 SPTY2D1Q68D10 685 aaPredicted RBP27.4■■□□□ 1.98
SCARB1-206ENST00000539320 SLF2Q8IX21 1173 aa27.4■■□□□ 1.98
SCARB1-206ENST00000539320 PTPN18Q99952 460 aa27.4■■□□□ 1.98
SCARB1-206ENST00000539320 C1orf115Q9H7X2 142 aa27.4■■□□□ 1.98
SCARB1-206ENST00000539320 RFX7Q2KHR2 1363 aa27.39■■□□□ 1.98
SCARB1-206ENST00000539320 RGS19P49795 217 aa27.39■■□□□ 1.98
SCARB1-206ENST00000539320 GTF2A2P52657 109 aa27.39■■□□□ 1.98
SCARB1-206ENST00000539320 CRHR2Q13324 411 aa27.39■■□□□ 1.98
SCARB1-206ENST00000539320 ERO1BQ86YB8 467 aa27.39■■□□□ 1.98
SCARB1-206ENST00000539320 BRI3BPQ8WY22 251 aa27.39■■□□□ 1.98
SCARB1-206ENST00000539320 FAM198AQ9UFP1 575 aa27.39■■□□□ 1.98
SCARB1-206ENST00000539320 AK9Q5TCS8 1911 aa27.38■■□□□ 1.97
SCARB1-206ENST00000539320 CCL15-CCL14A0A0B4J2E2 113 aa27.38■■□□□ 1.97
SCARB1-206ENST00000539320 CCL15Q16663 113 aa27.38■■□□□ 1.97
SCARB1-206ENST00000539320 MIGA2Q7L4E1 593 aa27.38■■□□□ 1.97
SCARB1-206ENST00000539320 SSH3Q8TE77 659 aa27.38■■□□□ 1.97
SCARB1-206ENST00000539320 HMG20BQ9P0W2 317 aa27.38■■□□□ 1.97
SCARB1-206ENST00000539320 HPS5Q9UPZ3 1129 aa27.38■■□□□ 1.97
SCARB1-206ENST00000539320 ARID4AP29374 1257 aaPredicted RBP27.37■■□□□ 1.97
SCARB1-206ENST00000539320 ATP8B2P98198 1209 aa27.37■■□□□ 1.97
SCARB1-206ENST00000539320 OS9Q13438 667 aaPredicted RBP27.37■■□□□ 1.97
SCARB1-206ENST00000539320 ERICH6Q7L0X2 663 aa27.37■■□□□ 1.97
SCARB1-206ENST00000539320 ZKSCAN4Q969J2 545 aaPredicted RBP27.37■■□□□ 1.97
SCARB1-206ENST00000539320 MROH7-TTC4A0A0A0MT08 1334 aa27.37■■□□□ 1.97
SCARB1-206ENST00000539320 SPATA5Q8NB90 893 aa27.36■■□□□ 1.97
SCARB1-206ENST00000539320 IDI2Q9BXS1 227 aa27.36■■□□□ 1.97
SCARB1-206ENST00000539320 DOCK2Q92608 1830 aa27.36■■□□□ 1.97
SCARB1-206ENST00000539320 INPP5BP32019 993 aa27.35■■□□□ 1.97
SCARB1-206ENST00000539320 RGS3P49796 1198 aa27.35■■□□□ 1.97
SCARB1-206ENST00000539320 MLLT1Q03111 559 aaPredicted RBP27.35■■□□□ 1.97
SCARB1-206ENST00000539320 PPIL2Q13356 520 aa27.35■■□□□ 1.97
SCARB1-206ENST00000539320 FBXO46Q6PJ61 603 aaPredicted RBP27.35■■□□□ 1.97
SCARB1-206ENST00000539320 PI16Q6UXB8 463 aa27.35■■□□□ 1.97
SCARB1-206ENST00000539320 FAM163AQ96GL9 167 aaPredicted RBP27.35■■□□□ 1.97
SCARB1-206ENST00000539320 GPR108Q9NPR9 543 aa27.35■■□□□ 1.97
SCARB1-206ENST00000539320 ZBTB7BO15156 539 aaPredicted RBP27.34■■□□□ 1.97
SCARB1-206ENST00000539320 ENTPD3O75355 529 aa27.34■■□□□ 1.97
SCARB1-206ENST00000539320 UQCRFS1P1P0C7P4 283 aa27.34■■□□□ 1.97
SCARB1-206ENST00000539320 BTDP43251 543 aa27.34■■□□□ 1.97
SCARB1-206ENST00000539320 MECOMQ03112 1051 aa27.34■■□□□ 1.97
SCARB1-206ENST00000539320 TNNI3KQ59H18 835 aa27.34■■□□□ 1.97
SCARB1-206ENST00000539320 FPGT-TNNI3KV9GXZ4 949 aa27.34■■□□□ 1.97
SCARB1-206ENST00000539320 SURF6O75683 361 aaKnown RBP27.33■■□□□ 1.97
SCARB1-206ENST00000539320 TAF1CQ15572 869 aaPredicted RBP27.33■■□□□ 1.97
SCARB1-206ENST00000539320 ERO1AQ96HE7 468 aa27.33■■□□□ 1.97
SCARB1-206ENST00000539320 ZNF112Q9UJU3 913 aa27.33■■□□□ 1.97
SCARB1-206ENST00000539320 ATRNL1Q5VV63 1379 aa27.33■■□□□ 1.97
SCARB1-206ENST00000539320 IRF6O14896 467 aa27.32■■□□□ 1.96
SCARB1-206ENST00000539320 CETPP11597 493 aa27.32■■□□□ 1.96
SCARB1-206ENST00000539320 MCAMP43121 646 aa27.32■■□□□ 1.96
SCARB1-206ENST00000539320 SOX10P56693 466 aa27.32■■□□□ 1.96
SCARB1-206ENST00000539320 SNAPC2Q13487 334 aa27.32■■□□□ 1.96
SCARB1-206ENST00000539320 ZFPM1Q8IX07 1006 aa27.32■■□□□ 1.96
SCARB1-206ENST00000539320 FAM43AQ8N2R8 423 aa27.32■■□□□ 1.96
SCARB1-206ENST00000539320 TRIM17Q9Y577 477 aa27.32■■□□□ 1.96
SCARB1-206ENST00000539320 WDHD1O75717 1129 aaPredicted RBP27.31■■□□□ 1.96
SCARB1-206ENST00000539320 PPATQ06203 517 aa27.31■■□□□ 1.96
SCARB1-206ENST00000539320 NOL9Q5SY16 702 aaKnown RBP27.31■■□□□ 1.96
SCARB1-206ENST00000539320 ZNF384Q8TF68 577 aa27.31■■□□□ 1.96
SCARB1-206ENST00000539320 GPR75-ASB3A0A0A6YYF3 556 aa27.3■■□□□ 1.96
SCARB1-206ENST00000539320 GSTO1P78417 241 aa27.3■■□□□ 1.96
SCARB1-206ENST00000539320 TTC39AQ5SRH9 613 aa27.3■■□□□ 1.96
SCARB1-206ENST00000539320 TBC1D9Q6ZT07 1266 aa27.3■■□□□ 1.96
SCARB1-206ENST00000539320 OTOP1Q7RTM1 612 aa27.3■■□□□ 1.96
SCARB1-206ENST00000539320 CD99L2Q8TCZ2 262 aa27.3■■□□□ 1.96
SCARB1-206ENST00000539320 PANK1Q8TE04 598 aa27.3■■□□□ 1.96
SCARB1-206ENST00000539320 NSUN4Q96CB9 384 aaKnown RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms