RNA–Protein interactions for RNA: ENST00000539041.5

SMPDL3A-203, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2 BASIC

Gene SMPDL3A, Length 1,755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-203ENST00000539041 KRT23Q9C075 422 aa24.18■■□□□ 1.46
SMPDL3A-203ENST00000539041 FDPSP14324 419 aaKnown RBP24.17■■□□□ 1.46
SMPDL3A-203ENST00000539041 FOSBP53539 338 aa24.17■■□□□ 1.46
SMPDL3A-203ENST00000539041 GRAPQ13588 217 aa24.17■■□□□ 1.46
SMPDL3A-203ENST00000539041 TPRNQ4KMQ1 711 aa24.17■■□□□ 1.46
SMPDL3A-203ENST00000539041 GRAPLQ8TC17 118 aaPredicted RBP24.17■■□□□ 1.46
SMPDL3A-203ENST00000539041 STAG1Q8WVM7 1258 aa24.17■■□□□ 1.46
SMPDL3A-203ENST00000539041 TSPY26PQ9H489 355 aa24.17■■□□□ 1.46
SMPDL3A-203ENST00000539041 DLEC1Q9Y238 1755 aa24.17■■□□□ 1.46
SMPDL3A-203ENST00000539041 MYH6P13533 1939 aa24.16■■□□□ 1.46
SMPDL3A-203ENST00000539041 ZBTB22O15209 634 aa24.16■■□□□ 1.46
SMPDL3A-203ENST00000539041 MFSD6Q6ZSS7 791 aa24.16■■□□□ 1.46
SMPDL3A-203ENST00000539041 LEO1Q8WVC0 666 aaPredicted RBP24.16■■□□□ 1.46
SMPDL3A-203ENST00000539041 TFIP11Q9UBB9 837 aaKnown RBP24.16■■□□□ 1.46
SMPDL3A-203ENST00000539041 GYS1P13807 737 aa24.16■■□□□ 1.46
SMPDL3A-203ENST00000539041 PRR5LQ6MZQ0 368 aa24.16■■□□□ 1.46
SMPDL3A-203ENST00000539041 ANP32BQ92688 251 aaKnown RBP24.16■■□□□ 1.46
SMPDL3A-203ENST00000539041 TFCP2L1Q9NZI6 479 aa24.16■■□□□ 1.46
SMPDL3A-203ENST00000539041 IRS2Q9Y4H2 1338 aa24.15■■□□□ 1.46
SMPDL3A-203ENST00000539041 CPLX1O14810 134 aa24.15■■□□□ 1.46
SMPDL3A-203ENST00000539041 IGDCC4Q8TDY8 1250 aa24.15■■□□□ 1.46
SMPDL3A-203ENST00000539041 RIOK1Q9BRS2 568 aaKnown RBP24.15■■□□□ 1.46
SMPDL3A-203ENST00000539041 TACC3Q9Y6A5 838 aa24.15■■□□□ 1.46
SMPDL3A-203ENST00000539041 TRIM37O94972 964 aa24.14■■□□□ 1.46
SMPDL3A-203ENST00000539041 RAB11FIP4Q86YS3 637 aa24.14■■□□□ 1.46
SMPDL3A-203ENST00000539041 KLHL34Q8N239 644 aa24.14■■□□□ 1.46
SMPDL3A-203ENST00000539041 INCENPQ9NQS7 918 aa24.14■■□□□ 1.46
SMPDL3A-203ENST00000539041 CFAP45Q9UL16 551 aa24.14■■□□□ 1.46
SMPDL3A-203ENST00000539041 DUOX1Q9NRD9 1551 aa24.14■■□□□ 1.45
SMPDL3A-203ENST00000539041 KDM4AO75164 1064 aa24.14■■□□□ 1.45
SMPDL3A-203ENST00000539041 METAP2P50579 478 aaKnown RBP eCLIP24.14■■□□□ 1.45
SMPDL3A-203ENST00000539041 CCDC173Q0VFZ6 552 aa24.14■■□□□ 1.45
SMPDL3A-203ENST00000539041 TMEM67Q5HYA8 995 aa24.14■■□□□ 1.45
SMPDL3A-203ENST00000539041 APOA5Q6Q788 366 aa24.14■■□□□ 1.45
SMPDL3A-203ENST00000539041 SGMS1Q86VZ5 419 aa24.14■■□□□ 1.45
SMPDL3A-203ENST00000539041 RNF41Q9H4P4 317 aaPredicted RBP24.14■■□□□ 1.45
SMPDL3A-203ENST00000539041 LY9Q9HBG7 655 aa24.14■■□□□ 1.45
SMPDL3A-203ENST00000539041 ORC3Q9UBD5 711 aaPredicted RBP24.14■■□□□ 1.45
SMPDL3A-203ENST00000539041 PPFIA3O75145 1194 aa24.13■■□□□ 1.45
SMPDL3A-203ENST00000539041 LIFRP42702 1097 aa24.13■■□□□ 1.45
SMPDL3A-203ENST00000539041 ST5P78524 1137 aa24.13■■□□□ 1.45
SMPDL3A-203ENST00000539041 PPARAQ07869 468 aa24.13■■□□□ 1.45
SMPDL3A-203ENST00000539041 ZSWIM5Q9P217 1185 aa24.13■■□□□ 1.45
SMPDL3A-203ENST00000539041 LEMD3Q9Y2U8 911 aa24.13■■□□□ 1.45
SMPDL3A-203ENST00000539041 SDR42E1Q8WUS8 393 aa24.12■■□□□ 1.45
SMPDL3A-203ENST00000539041 ANAPC4Q9UJX5 808 aa24.12■■□□□ 1.45
SMPDL3A-203ENST00000539041 ANKRD31Q8N7Z5 1873 aa24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 LRRC37AA6NMS7 1700 aa24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 GOLGA6L4A6NEF3 574 aa24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 IFIT3O14879 490 aaKnown RBP24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 SERPINB2P05120 415 aa24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 HMGB2P26583 209 aaKnown RBP24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 ATL3Q6DD88 541 aa24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 NFXL1Q6ZNB6 911 aa24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 ZNF384Q8TF68 577 aa24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 RPGRQ92834 1020 aaKnown RBP24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 NSUN4Q96CB9 384 aaKnown RBP24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 C8orf76Q96K31 380 aa24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 MTA3Q9BTC8 594 aa24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 ZBTB43O43298 467 aa24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 CDKL5O76039 1030 aa24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 DYNLL1P63167 89 aaKnown RBP24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 GUCY1B3Q02153 619 aa24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 CHAF1AQ13111 956 aaPredicted RBP24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 TMED8Q6PL24 325 aaPredicted RBP24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 RGS22Q8NE09 1264 aa24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 ZNF396Q96N95 335 aaPredicted RBP24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 PPP1R9BQ96SB3 815 aa24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 BRIP1Q9BX63 1249 aa24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 SENP2Q9HC62 589 aa24.11■■□□□ 1.45
SMPDL3A-203ENST00000539041 XDHP47989 1333 aa24.1■■□□□ 1.45
SMPDL3A-203ENST00000539041 ADD1P35611 737 aaKnown RBP24.1■■□□□ 1.45
SMPDL3A-203ENST00000539041 RRP12Q5JTH9 1297 aaKnown RBP24.1■■□□□ 1.45
SMPDL3A-203ENST00000539041 CPLX2Q6PUV4 134 aaKnown RBP24.1■■□□□ 1.45
SMPDL3A-203ENST00000539041 TXNRD3Q86VQ6 643 aa24.1■■□□□ 1.45
SMPDL3A-203ENST00000539041 TOMM22Q9NS69 142 aa24.1■■□□□ 1.45
SMPDL3A-203ENST00000539041 ANKIB1Q9P2G1 1089 aa24.1■■□□□ 1.45
SMPDL3A-203ENST00000539041 MECOMQ03112 1051 aa24.09■■□□□ 1.45
SMPDL3A-203ENST00000539041 NID2Q14112 1375 aa24.09■■□□□ 1.45
SMPDL3A-203ENST00000539041 CDK5RAP2Q96SN8 1893 aa24.09■■□□□ 1.45
SMPDL3A-203ENST00000539041 CCDC69A6NI79 296 aa24.08■■□□□ 1.45
SMPDL3A-203ENST00000539041 GOLGA8AA7E2F4 631 aa24.08■■□□□ 1.45
SMPDL3A-203ENST00000539041 SART3Q15020 963 aaKnown RBP24.08■■□□□ 1.45
SMPDL3A-203ENST00000539041 CRY2Q49AN0 593 aa24.08■■□□□ 1.45
SMPDL3A-203ENST00000539041 MINDY4BA8MYZ0 360 aa24.08■■□□□ 1.44
SMPDL3A-203ENST00000539041 TXNRD1Q16881 649 aa24.08■■□□□ 1.44
SMPDL3A-203ENST00000539041 SPTY2D1Q68D10 685 aaPredicted RBP24.08■■□□□ 1.44
SMPDL3A-203ENST00000539041 GIMAP6Q6P9H5 292 aa24.08■■□□□ 1.44
SMPDL3A-203ENST00000539041 MICU3Q86XE3 530 aa24.08■■□□□ 1.44
SMPDL3A-203ENST00000539041 NRXN2Q9P2S2 1712 aa24.08■■□□□ 1.44
SMPDL3A-203ENST00000539041 NAV1Q8NEY1 1877 aa24.08■■□□□ 1.44
SMPDL3A-203ENST00000539041 LIG1P18858 919 aa24.07■■□□□ 1.44
SMPDL3A-203ENST00000539041 FBXO18Q8NFZ0 1043 aa24.07■■□□□ 1.44
SMPDL3A-203ENST00000539041 RBM17Q96I25 401 aaKnown RBP24.07■■□□□ 1.44
SMPDL3A-203ENST00000539041 PGBD1Q96JS3 809 aa24.07■■□□□ 1.44
SMPDL3A-203ENST00000539041 RCOR1Q9UKL0 485 aa24.07■■□□□ 1.44
SMPDL3A-203ENST00000539041 SLC12A7Q9Y666 1083 aa24.07■■□□□ 1.44
SMPDL3A-203ENST00000539041 ERICH2A1L162 156 aa24.06■■□□□ 1.44
SMPDL3A-203ENST00000539041 IGSF3O75054 1194 aa24.06■■□□□ 1.44
SMPDL3A-203ENST00000539041 RXRAP19793 462 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms