RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	FAM151A	Q8WW52	585 aa		15.1	■□□□□ 0.01
CLTCL1-205	ENST00000538828	IDI2	Q9BXS1	227 aa		15.1	■□□□□ 0.01
CLTCL1-205	ENST00000538828	ANGEL1	Q9UNK9	670 aa	Known RBP	15.1	■□□□□ 0.01
CLTCL1-205	ENST00000538828	SCAF8	Q9UPN6	1271 aa	Known RBP	15.1	■□□□□ 0.01
CLTCL1-205	ENST00000538828	LAMB1	P07942	1786 aa		15.1	■□□□□ 0.01
CLTCL1-205	ENST00000538828	USP2	O75604	605 aa	Predicted RBP	15.09	■□□□□ 0.01
CLTCL1-205	ENST00000538828	HSPA8	P11142	646 aa	Known RBP	15.09	■□□□□ 0.01
CLTCL1-205	ENST00000538828	TM4SF4	P48230	202 aa		15.09	■□□□□ 0.01
CLTCL1-205	ENST00000538828	KIF23	Q02241	960 aa	Predicted RBP	15.09	■□□□□ 0.01
CLTCL1-205	ENST00000538828	TTC39A	Q5SRH9	613 aa		15.09	■□□□□ 0.01
CLTCL1-205	ENST00000538828	CDC42EP5	Q6NZY7	148 aa		15.09	■□□□□ 0.01
CLTCL1-205	ENST00000538828	SIRT2	Q8IXJ6	389 aa		15.09	■□□□□ 0.01
CLTCL1-205	ENST00000538828	RHPN1	Q8TCX5	695 aa		15.09	■□□□□ 0.01
CLTCL1-205	ENST00000538828	EAF2	Q96CJ1	260 aa	Predicted RBP	15.09	■□□□□ 0.01
CLTCL1-205	ENST00000538828	DBNDD2	Q9BQY9	259 aa		15.09	■□□□□ 0.01
CLTCL1-205	ENST00000538828	ABCF2	Q9UG63	623 aa		15.09	■□□□□ 0.01
CLTCL1-205	ENST00000538828	DBNL	Q9UJU6	430 aa	Known RBP	15.09	■□□□□ 0.01
CLTCL1-205	ENST00000538828	GPR75-ASB3	A0A0A6YYF3	556 aa		15.08	■□□□□ 0
CLTCL1-205	ENST00000538828	TCP10L2	B9ZVM9	353 aa		15.08	■□□□□ 0
CLTCL1-205	ENST00000538828	ENTPD3	O75355	529 aa		15.08	■□□□□ 0
CLTCL1-205	ENST00000538828	GRM1	Q13255	1194 aa		15.08	■□□□□ 0
CLTCL1-205	ENST00000538828	DIXDC1	Q155Q3	683 aa		15.08	■□□□□ 0
CLTCL1-205	ENST00000538828	DCAF15	Q66K64	600 aa		15.08	■□□□□ 0
CLTCL1-205	ENST00000538828	MOB2	Q70IA6	237 aa		15.08	■□□□□ 0
CLTCL1-205	ENST00000538828	CLASRP	Q8N2M8	674 aa	Known RBP	15.08	■□□□□ 0
CLTCL1-205	ENST00000538828	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	15.08	■□□□□ 0
CLTCL1-205	ENST00000538828	NSUN4	Q96CB9	384 aa	Known RBP	15.08	■□□□□ 0
CLTCL1-205	ENST00000538828	CSRNP1	Q96S65	589 aa		15.08	■□□□□ 0
CLTCL1-205	ENST00000538828	MROH7-TTC4	A0A0A0MT08	1334 aa		15.08	■□□□□ 0
CLTCL1-205	ENST00000538828	MECOM	Q03112	1051 aa		15.07	■□□□□ 0
CLTCL1-205	ENST00000538828	SREBF2	Q12772	1141 aa		15.07	■□□□□ 0
CLTCL1-205	ENST00000538828	AAMP	Q13685	434 aa		15.07	■□□□□ 0
CLTCL1-205	ENST00000538828	NOM1	Q5C9Z4	860 aa	Known RBP	15.07	■□□□□ 0
CLTCL1-205	ENST00000538828	C20orf194	Q5TEA3	1177 aa		15.07	■□□□□ 0
CLTCL1-205	ENST00000538828	SPRYD7	Q5W111	196 aa		15.07	■□□□□ 0
CLTCL1-205	ENST00000538828	CERS3	Q8IU89	383 aa		15.07	■□□□□ 0
CLTCL1-205	ENST00000538828	SLC10A4	Q96EP9	437 aa		15.07	■□□□□ 0
CLTCL1-205	ENST00000538828	ZIC5	Q96T25	663 aa		15.07	■□□□□ 0
CLTCL1-205	ENST00000538828	CFHR5	Q9BXR6	569 aa		15.07	■□□□□ 0
CLTCL1-205	ENST00000538828	TMEM39B	Q9GZU3	492 aa		15.07	■□□□□ 0
CLTCL1-205	ENST00000538828	EXOC6B	Q9Y2D4	811 aa		15.07	■□□□□ 0
CLTCL1-205	ENST00000538828	RFX7	Q2KHR2	1363 aa		15.07	■□□□□ 0
CLTCL1-205	ENST00000538828	MANSC4	A6NHS7	340 aa	Predicted RBP	15.06	■□□□□ 0
CLTCL1-205	ENST00000538828	MAP3K9	P80192	1104 aa		15.06	■□□□□ 0
CLTCL1-205	ENST00000538828	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	15.06	■□□□□ 0
CLTCL1-205	ENST00000538828	USP40	Q9NVE5	1235 aa		15.06	■□□□□ 0
CLTCL1-205	ENST00000538828	ALDH1A1	P00352	501 aa		15.05	■□□□□ -0
CLTCL1-205	ENST00000538828	PLCG2	P16885	1265 aa		15.05	■□□□□ -0
CLTCL1-205	ENST00000538828	LBX1	P52954	281 aa		15.05	■□□□□ -0
CLTCL1-205	ENST00000538828	RRP1	P56182	461 aa	Known RBP	15.05	■□□□□ -0
CLTCL1-205	ENST00000538828	MAP3K10	Q02779	954 aa		15.05	■□□□□ -0
CLTCL1-205	ENST00000538828	COL13A1	Q5TAT6	717 aa	Predicted RBP	15.05	■□□□□ -0
CLTCL1-205	ENST00000538828	ZNF384	Q8TF68	577 aa		15.05	■□□□□ -0
CLTCL1-205	ENST00000538828	LRP2BP	Q9P2M1	347 aa		15.05	■□□□□ -0
CLTCL1-205	ENST00000538828	COL2A1	P02458	1487 aa	Predicted RBP	15.05	■□□□□ -0
CLTCL1-205	ENST00000538828	ATRNL1	Q5VV63	1379 aa		15.04	■□□□□ -0
CLTCL1-205	ENST00000538828	CYP2E1	P05181	493 aa	Predicted RBP	15.04	■□□□□ -0
CLTCL1-205	ENST00000538828	RHBDL3	P58872	404 aa		15.04	■□□□□ -0
CLTCL1-205	ENST00000538828	PPP4C	P60510	307 aa		15.04	■□□□□ -0
CLTCL1-205	ENST00000538828	PI16	Q6UXB8	463 aa		15.04	■□□□□ -0
CLTCL1-205	ENST00000538828	AACS	Q86V21	672 aa		15.04	■□□□□ -0
CLTCL1-205	ENST00000538828	WNK4	Q96J92	1243 aa		15.04	■□□□□ -0
CLTCL1-205	ENST00000538828	CCDC8	Q9H0W5	538 aa	Predicted RBP	15.04	■□□□□ -0
CLTCL1-205	ENST00000538828	FAM198A	Q9UFP1	575 aa		15.04	■□□□□ -0
CLTCL1-205	ENST00000538828	ZNF112	Q9UJU3	913 aa		15.04	■□□□□ -0
CLTCL1-205	ENST00000538828	MAST2	Q6P0Q8	1798 aa		15.03	■□□□□ -0
CLTCL1-205	ENST00000538828	TESPA1	A2RU30	521 aa	Predicted RBP	15.03	■□□□□ -0
CLTCL1-205	ENST00000538828	WDHD1	O75717	1129 aa	Predicted RBP	15.03	■□□□□ -0
CLTCL1-205	ENST00000538828	BAG3	O95817	575 aa		15.03	■□□□□ -0
CLTCL1-205	ENST00000538828	BTD	P43251	543 aa		15.03	■□□□□ -0
CLTCL1-205	ENST00000538828	CACNB3	P54284	484 aa		15.03	■□□□□ -0
CLTCL1-205	ENST00000538828	PRKG1	Q13976	671 aa		15.03	■□□□□ -0
CLTCL1-205	ENST00000538828	TTF1	Q15361	905 aa	Predicted RBP	15.03	■□□□□ -0
CLTCL1-205	ENST00000538828	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	15.03	■□□□□ -0
CLTCL1-205	ENST00000538828	ZNF341	Q9BYN7	854 aa		15.03	■□□□□ -0
CLTCL1-205	ENST00000538828	RNF186	Q9NXI6	227 aa		15.03	■□□□□ -0
CLTCL1-205	ENST00000538828	RAI14	Q9P0K7	980 aa		15.03	■□□□□ -0
CLTCL1-205	ENST00000538828	CSAD	Q9Y600	493 aa		15.03	■□□□□ -0
CLTCL1-205	ENST00000538828	OTOF	Q9HC10	1997 aa		15.02	■□□□□ -0
CLTCL1-205	ENST00000538828	TBC1D12	O60347	775 aa		15.02	■□□□□ -0
CLTCL1-205	ENST00000538828	ZAP70	P43403	619 aa		15.02	■□□□□ -0
CLTCL1-205	ENST00000538828	NFIA	Q12857	509 aa		15.02	■□□□□ -0
CLTCL1-205	ENST00000538828	IFFO2	Q5TF58	517 aa		15.02	■□□□□ -0
CLTCL1-205	ENST00000538828	NAA16	Q6N069	864 aa	Predicted RBP	15.02	■□□□□ -0
CLTCL1-205	ENST00000538828	TBC1D9	Q6ZT07	1266 aa		15.02	■□□□□ -0
CLTCL1-205	ENST00000538828	DCTPP1	Q9H773	170 aa		15.02	■□□□□ -0
CLTCL1-205	ENST00000538828	TLR7	Q9NYK1	1049 aa	Known RBP	15.02	■□□□□ -0
CLTCL1-205	ENST00000538828	AK9	Q5TCS8	1911 aa		15.02	□□□□□ -0.01
CLTCL1-205	ENST00000538828	SPDYE5	A6NIY4	337 aa		15.01	□□□□□ -0.01
CLTCL1-205	ENST00000538828	IFIT2	P09913	472 aa	Known RBP	15.01	□□□□□ -0.01
CLTCL1-205	ENST00000538828	RGS3	P49796	1198 aa		15.01	□□□□□ -0.01
CLTCL1-205	ENST00000538828	NOL9	Q5SY16	702 aa	Known RBP	15.01	□□□□□ -0.01
CLTCL1-205	ENST00000538828	OTUD7B	Q6GQQ9	843 aa		15.01	□□□□□ -0.01
CLTCL1-205	ENST00000538828	ERO1B	Q86YB8	467 aa		15.01	□□□□□ -0.01
CLTCL1-205	ENST00000538828	CDAN1	Q8IWY9	1227 aa		15.01	□□□□□ -0.01
CLTCL1-205	ENST00000538828	CLMN	Q96JQ2	1002 aa		15.01	□□□□□ -0.01
CLTCL1-205	ENST00000538828	NOL10	Q9BSC4	688 aa	Known RBP	15.01	□□□□□ -0.01
CLTCL1-205	ENST00000538828	LRRCC1	Q9C099	1032 aa		15.01	□□□□□ -0.01
CLTCL1-205	ENST00000538828	IL1RAPL2	Q9NP60	686 aa		15.01	□□□□□ -0.01
CLTCL1-205	ENST00000538828	ZCCHC17	Q9NP64	241 aa	Known RBP	15.01	□□□□□ -0.01

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