RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 ZNF384Q8TF68 577 aa16.94■□□□□ 0.3
CD4-208ENST00000538827 TTF2Q9UNY4 1162 aaKnown RBP16.94■□□□□ 0.3
CD4-208ENST00000538827 MROH7-TTC4A0A0A0MT08 1334 aa16.94■□□□□ 0.3
CD4-208ENST00000538827 CDK5RAP2Q96SN8 1893 aa16.93■□□□□ 0.3
CD4-208ENST00000538827 PSMD14O00487 310 aa16.93■□□□□ 0.3
CD4-208ENST00000538827 LDHCP07864 332 aa16.93■□□□□ 0.3
CD4-208ENST00000538827 FKBP1AP62942 108 aaKnown RBP16.93■□□□□ 0.3
CD4-208ENST00000538827 DYNLL1P63167 89 aaKnown RBP16.93■□□□□ 0.3
CD4-208ENST00000538827 VPS53Q5VIR6 699 aa16.93■□□□□ 0.3
CD4-208ENST00000538827 KIAA0825Q8IV33 1275 aa16.93■□□□□ 0.3
CD4-208ENST00000538827 SLF2Q8IX21 1173 aa16.93■□□□□ 0.3
CD4-208ENST00000538827 TBC1D32Q96NH3 1257 aa16.93■□□□□ 0.3
CD4-208ENST00000538827 USP26Q9BXU7 913 aa16.93■□□□□ 0.3
CD4-208ENST00000538827 AATFQ9NY61 560 aaKnown RBP eCLIP16.93■□□□□ 0.3
CD4-208ENST00000538827 LAMB1P07942 1786 aa16.92■□□□□ 0.3
CD4-208ENST00000538827 ECM29Q5VYK3 1845 aa16.92■□□□□ 0.3
CD4-208ENST00000538827 IGSF3O75054 1194 aa16.92■□□□□ 0.3
CD4-208ENST00000538827 VEGFBP49765 207 aa16.92■□□□□ 0.3
CD4-208ENST00000538827 SCNN1DP51172 638 aa16.92■□□□□ 0.3
CD4-208ENST00000538827 CIAPIN1Q6FI81 312 aa16.92■□□□□ 0.3
CD4-208ENST00000538827 SUGT1Q9Y2Z0 365 aa16.92■□□□□ 0.3
CD4-208ENST00000538827 RBM8AQ9Y5S9 174 aaKnown RBP16.92■□□□□ 0.3
CD4-208ENST00000538827 MYO3BQ8WXR4 1341 aa16.92■□□□□ 0.3
CD4-208ENST00000538827 APPP05067 770 aa16.91■□□□□ 0.3
CD4-208ENST00000538827 BTDP43251 543 aa16.91■□□□□ 0.3
CD4-208ENST00000538827 EIF6P56537 245 aaKnown RBP16.91■□□□□ 0.3
CD4-208ENST00000538827 RSBN1LQ6PCB5 846 aaPredicted RBP16.91■□□□□ 0.3
CD4-208ENST00000538827 TMED8Q6PL24 325 aaPredicted RBP16.91■□□□□ 0.3
CD4-208ENST00000538827 U3KPZ7 1027 aaPredicted RBP16.91■□□□□ 0.3
CD4-208ENST00000538827 BAZ2AQ9UIF9 1905 aaKnown RBP16.91■□□□□ 0.3
CD4-208ENST00000538827 HSPA8P11142 646 aaKnown RBP16.9■□□□□ 0.3
CD4-208ENST00000538827 MAP2K1Q02750 393 aaPredicted RBP16.9■□□□□ 0.3
CD4-208ENST00000538827 DSCC1Q9BVC3 393 aa16.9■□□□□ 0.3
CD4-208ENST00000538827 SLC4A4Q9Y6R1 1079 aa16.9■□□□□ 0.3
CD4-208ENST00000538827 FOCADQ5VW36 1801 aa16.9■□□□□ 0.3
CD4-208ENST00000538827 CCDC85CA6NKD9 419 aa16.89■□□□□ 0.29
CD4-208ENST00000538827 TMEM88BA6NKF7 163 aa16.89■□□□□ 0.29
CD4-208ENST00000538827 BAG3O95817 575 aa16.89■□□□□ 0.29
CD4-208ENST00000538827 HSPD1P10809 573 aaKnown RBP16.89■□□□□ 0.29
CD4-208ENST00000538827 CRKP46108 304 aa16.89■□□□□ 0.29
CD4-208ENST00000538827 RBM5P52756 815 aaKnown RBP eCLIP16.89■□□□□ 0.29
CD4-208ENST00000538827 CXCL9Q07325 125 aa16.89■□□□□ 0.29
CD4-208ENST00000538827 TNIP1Q15025 636 aa16.89■□□□□ 0.29
CD4-208ENST00000538827 TEKT1Q969V4 418 aa16.89■□□□□ 0.29
CD4-208ENST00000538827 STRBPQ96SI9 672 aaKnown RBP16.89■□□□□ 0.29
CD4-208ENST00000538827 RIOK1Q9BRS2 568 aaKnown RBP16.89■□□□□ 0.29
CD4-208ENST00000538827 CRNKL1Q9BZJ0 848 aaKnown RBP16.89■□□□□ 0.29
CD4-208ENST00000538827 ZBTB12Q9Y330 459 aaPredicted RBP16.89■□□□□ 0.29
CD4-208ENST00000538827 DAGLAQ9Y4D2 1042 aa16.89■□□□□ 0.29
CD4-208ENST00000538827 GJA3Q9Y6H8 435 aa16.89■□□□□ 0.29
CD4-208ENST00000538827 GAKO14976 1311 aa16.89■□□□□ 0.29
CD4-208ENST00000538827 PASKQ96RG2 1323 aa16.89■□□□□ 0.29
CD4-208ENST00000538827 ZNF541Q9H0D2 1346 aa16.89■□□□□ 0.29
CD4-208ENST00000538827 EPB41L2O43491 1005 aaKnown RBP16.88■□□□□ 0.29
CD4-208ENST00000538827 PRKAB2O43741 272 aa16.88■□□□□ 0.29
CD4-208ENST00000538827 GNAT2P19087 354 aa16.88■□□□□ 0.29
CD4-208ENST00000538827 TDO2P48775 406 aa16.88■□□□□ 0.29
CD4-208ENST00000538827 RBM25P49756 843 aaKnown RBP16.88■□□□□ 0.29
CD4-208ENST00000538827 HDAC9Q9UKV0 1011 aa16.88■□□□□ 0.29
CD4-208ENST00000538827 RBM19Q9Y4C8 960 aaKnown RBP16.88■□□□□ 0.29
CD4-208ENST00000538827 VIL1P09327 827 aaKnown RBP16.87■□□□□ 0.29
CD4-208ENST00000538827 HSPA4P34932 840 aa16.87■□□□□ 0.29
CD4-208ENST00000538827 CREB3L3Q68CJ9 461 aa16.87■□□□□ 0.29
CD4-208ENST00000538827 LDHDQ86WU2 507 aa16.87■□□□□ 0.29
CD4-208ENST00000538827 SH3RF3Q8TEJ3 882 aaPredicted RBP16.87■□□□□ 0.29
CD4-208ENST00000538827 SDR42E1Q8WUS8 393 aa16.87■□□□□ 0.29
CD4-208ENST00000538827 MAP4K1Q92918 833 aa16.87■□□□□ 0.29
CD4-208ENST00000538827 NAPBQ9H115 298 aa16.87■□□□□ 0.29
CD4-208ENST00000538827 PALD1Q9ULE6 856 aa16.87■□□□□ 0.29
CD4-208ENST00000538827 MYH1P12882 1939 aa16.86■□□□□ 0.29
CD4-208ENST00000538827 IQCA1LA6NCM1 817 aa16.86■□□□□ 0.29
CD4-208ENST00000538827 FOXP2O15409 715 aa16.86■□□□□ 0.29
CD4-208ENST00000538827 USP5P45974 858 aa16.86■□□□□ 0.29
CD4-208ENST00000538827 RNF20Q5VTR2 975 aa16.86■□□□□ 0.29
CD4-208ENST00000538827 TEX11Q8IYF3 940 aa16.86■□□□□ 0.29
CD4-208ENST00000538827 NACAP1Q9BZK3 213 aa16.86■□□□□ 0.29
CD4-208ENST00000538827 EPB41L4AQ9HCS5 686 aaPredicted RBP16.86■□□□□ 0.29
CD4-208ENST00000538827 DDX60LQ5H9U9 1706 aaKnown RBP16.86■□□□□ 0.29
CD4-208ENST00000538827 GPR75-ASB3A0A0A6YYF3 556 aa16.85■□□□□ 0.29
CD4-208ENST00000538827 FZD9O00144 591 aa16.85■□□□□ 0.29
CD4-208ENST00000538827 SLC27A2O14975 620 aa16.85■□□□□ 0.29
CD4-208ENST00000538827 PLCG2P16885 1265 aa16.85■□□□□ 0.29
CD4-208ENST00000538827 ANP32AP39687 249 aaKnown RBP16.85■□□□□ 0.29
CD4-208ENST00000538827 CFAP100Q494V2 611 aa16.85■□□□□ 0.29
CD4-208ENST00000538827 HHIPL2Q6UWX4 724 aa16.85■□□□□ 0.29
CD4-208ENST00000538827 AGBL3Q8NEM8 1001 aa16.85■□□□□ 0.29
CD4-208ENST00000538827 DDRGK1Q96HY6 314 aa16.85■□□□□ 0.29
CD4-208ENST00000538827 CTNNA3Q9UI47 895 aa16.85■□□□□ 0.29
CD4-208ENST00000538827 GSG1L2A8MUP6 293 aa16.84■□□□□ 0.29
CD4-208ENST00000538827 PATL2C9JE40 543 aaKnown RBP16.84■□□□□ 0.29
CD4-208ENST00000538827 POTEIP0CG38 1075 aa16.84■□□□□ 0.29
CD4-208ENST00000538827 POTEJP0CG39 1038 aa16.84■□□□□ 0.29
CD4-208ENST00000538827 ZKSCAN1P17029 563 aaPredicted RBP16.84■□□□□ 0.29
CD4-208ENST00000538827 GMPSP49915 693 aaPredicted RBP16.84■□□□□ 0.29
CD4-208ENST00000538827 HAND2P61296 217 aa16.84■□□□□ 0.29
CD4-208ENST00000538827 IMMTQ16891 758 aaKnown RBP16.84■□□□□ 0.29
CD4-208ENST00000538827 DEFB115Q30KQ5 88 aa16.84■□□□□ 0.29
CD4-208ENST00000538827 CERS3Q8IU89 383 aa16.84■□□□□ 0.29
CD4-208ENST00000538827 IFNL3Q8IZI9 196 aa16.84■□□□□ 0.29
CD4-208ENST00000538827 OGFOD1Q8N543 542 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms