RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 ZNF157P51786 506 aaPredicted RBP10.34□□□□□ -0.75
SPARC-208ENST00000538026 RHBDL3P58872 404 aa10.34□□□□□ -0.75
SPARC-208ENST00000538026 KIF23Q02241 960 aaPredicted RBP10.34□□□□□ -0.75
SPARC-208ENST00000538026 FKBP1CQ5VVH2 108 aa10.34□□□□□ -0.75
SPARC-208ENST00000538026 PAXIP1Q6ZW49 1069 aaPredicted RBP10.34□□□□□ -0.75
SPARC-208ENST00000538026 SH3BP5LQ7L8J4 393 aa10.34□□□□□ -0.75
SPARC-208ENST00000538026 ADGRA1Q86SQ6 560 aa10.34□□□□□ -0.75
SPARC-208ENST00000538026 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.34□□□□□ -0.75
SPARC-208ENST00000538026 CSRNP1Q96S65 589 aa10.34□□□□□ -0.75
SPARC-208ENST00000538026 ANTXR1Q9H6X2 564 aa10.34□□□□□ -0.75
SPARC-208ENST00000538026 PIH1D3Q9NQM4 214 aaKnown RBP10.34□□□□□ -0.75
SPARC-208ENST00000538026 ABCF2Q9UG63 623 aa10.34□□□□□ -0.75
SPARC-208ENST00000538026 PPP2R3BQ9Y5P8 575 aa10.34□□□□□ -0.75
SPARC-208ENST00000538026 AK9Q5TCS8 1911 aa10.34□□□□□ -0.75
SPARC-208ENST00000538026 CDK5RAP2Q96SN8 1893 aa10.34□□□□□ -0.75
SPARC-208ENST00000538026 GPR75-ASB3A0A0A6YYF3 556 aa10.33□□□□□ -0.76
SPARC-208ENST00000538026 APBB1O00213 710 aa10.33□□□□□ -0.76
SPARC-208ENST00000538026 MYO1BO43795 1136 aa10.33□□□□□ -0.76
SPARC-208ENST00000538026 HSPA8P11142 646 aaKnown RBP10.33□□□□□ -0.76
SPARC-208ENST00000538026 GORABQ5T7V8 394 aa10.33□□□□□ -0.76
SPARC-208ENST00000538026 FAM83AQ86UY5 434 aa10.33□□□□□ -0.76
SPARC-208ENST00000538026 AACSQ86V21 672 aa10.33□□□□□ -0.76
SPARC-208ENST00000538026 DDX4Q9NQI0 724 aaKnown RBP10.33□□□□□ -0.76
SPARC-208ENST00000538026 USP40Q9NVE5 1235 aa10.33□□□□□ -0.76
SPARC-208ENST00000538026 TSKSQ9UJT2 592 aa10.33□□□□□ -0.76
SPARC-208ENST00000538026 ANGEL1Q9UNK9 670 aaKnown RBP10.33□□□□□ -0.76
SPARC-208ENST00000538026 MAST3O60307 1309 aa10.33□□□□□ -0.76
SPARC-208ENST00000538026 ATRNL1Q5VV63 1379 aa10.32□□□□□ -0.76
SPARC-208ENST00000538026 UQCRFS1P1P0C7P4 283 aa10.32□□□□□ -0.76
SPARC-208ENST00000538026 NOGQ13253 232 aa10.32□□□□□ -0.76
SPARC-208ENST00000538026 TTC39AQ5SRH9 613 aa10.32□□□□□ -0.76
SPARC-208ENST00000538026 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.32□□□□□ -0.76
SPARC-208ENST00000538026 ERICH6Q7L0X2 663 aa10.32□□□□□ -0.76
SPARC-208ENST00000538026 ERC1Q8IUD2 1116 aa10.32□□□□□ -0.76
SPARC-208ENST00000538026 CNKSR2Q8WXI2 1034 aa10.32□□□□□ -0.76
SPARC-208ENST00000538026 CCDC102AQ96A19 550 aa10.32□□□□□ -0.76
SPARC-208ENST00000538026 KIF1BPQ96EK5 621 aa10.32□□□□□ -0.76
SPARC-208ENST00000538026 DCTPP1Q9H773 170 aa10.32□□□□□ -0.76
SPARC-208ENST00000538026 DOCK2Q92608 1830 aa10.32□□□□□ -0.76
SPARC-208ENST00000538026 MROH7-TTC4A0A0A0MT08 1334 aa10.32□□□□□ -0.76
SPARC-208ENST00000538026 LAMB1P07942 1786 aa10.31□□□□□ -0.76
SPARC-208ENST00000538026 RAB11FIP3O75154 756 aa10.31□□□□□ -0.76
SPARC-208ENST00000538026 LBX1P52954 281 aa10.31□□□□□ -0.76
SPARC-208ENST00000538026 MAP2K1Q02750 393 aaPredicted RBP10.31□□□□□ -0.76
SPARC-208ENST00000538026 TCP10Q12799 353 aa10.31□□□□□ -0.76
SPARC-208ENST00000538026 MKRN3Q13064 507 aaKnown RBP10.31□□□□□ -0.76
SPARC-208ENST00000538026 TTLL12Q14166 644 aaPredicted RBP10.31□□□□□ -0.76
SPARC-208ENST00000538026 SUPT20HL1Q3ZLR7 823 aa10.31□□□□□ -0.76
SPARC-208ENST00000538026 CCDC158Q5M9N0 1113 aa10.31□□□□□ -0.76
SPARC-208ENST00000538026 ZGPATQ8N5A5 531 aaKnown RBP10.31□□□□□ -0.76
SPARC-208ENST00000538026 FAM151AQ8WW52 585 aa10.31□□□□□ -0.76
SPARC-208ENST00000538026 EDC3Q96F86 508 aaKnown RBP10.31□□□□□ -0.76
SPARC-208ENST00000538026 IDI2Q9BXS1 227 aa10.31□□□□□ -0.76
SPARC-208ENST00000538026 DDTLA6NHG4 134 aaPredicted RBP10.3□□□□□ -0.76
SPARC-208ENST00000538026 HMMRO75330 724 aa10.3□□□□□ -0.76
SPARC-208ENST00000538026 CHGBP05060 677 aa10.3□□□□□ -0.76
SPARC-208ENST00000538026 BTDP43251 543 aa10.3□□□□□ -0.76
SPARC-208ENST00000538026 RGS3P49796 1198 aa10.3□□□□□ -0.76
SPARC-208ENST00000538026 TNFAIP1Q13829 316 aa10.3□□□□□ -0.76
SPARC-208ENST00000538026 SLFNL1Q499Z3 407 aa10.3□□□□□ -0.76
SPARC-208ENST00000538026 HSP90AB4PQ58FF6 505 aa10.3□□□□□ -0.76
SPARC-208ENST00000538026 SPRYD7Q5W111 196 aa10.3□□□□□ -0.76
SPARC-208ENST00000538026 SPTY2D1Q68D10 685 aaPredicted RBP10.3□□□□□ -0.76
SPARC-208ENST00000538026 MIGA2Q7L4E1 593 aa10.3□□□□□ -0.76
SPARC-208ENST00000538026 ARMC9Q7Z3E5 817 aa10.3□□□□□ -0.76
SPARC-208ENST00000538026 DZIP1Q86YF9 867 aaKnown RBP10.3□□□□□ -0.76
SPARC-208ENST00000538026 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.3□□□□□ -0.76
SPARC-208ENST00000538026 R3HDMLQ9H3Y0 253 aa10.3□□□□□ -0.76
SPARC-208ENST00000538026 RAI14Q9P0K7 980 aa10.3□□□□□ -0.76
SPARC-208ENST00000538026 SIPA1L1O43166 1804 aa10.3□□□□□ -0.76
SPARC-208ENST00000538026 FOCADQ5VW36 1801 aa10.29□□□□□ -0.76
SPARC-208ENST00000538026 PHF20L1A8MW92 1017 aa10.29□□□□□ -0.76
SPARC-208ENST00000538026 PPP1R12BO60237 982 aaPredicted RBP10.29□□□□□ -0.76
SPARC-208ENST00000538026 NF2P35240 595 aa10.29□□□□□ -0.76
SPARC-208ENST00000538026 TM4SF4P48230 202 aa10.29□□□□□ -0.76
SPARC-208ENST00000538026 CTCFP49711 727 aaPredicted RBP10.29□□□□□ -0.76
SPARC-208ENST00000538026 PPP4CP60510 307 aa10.29□□□□□ -0.76
SPARC-208ENST00000538026 MAP3K10Q02779 954 aa10.29□□□□□ -0.76
SPARC-208ENST00000538026 VGLL4Q14135 290 aa10.29□□□□□ -0.76
SPARC-208ENST00000538026 OTUD7AQ8TE49 926 aaPredicted RBP10.29□□□□□ -0.76
SPARC-208ENST00000538026 SH3RF3Q8TEJ3 882 aaPredicted RBP10.29□□□□□ -0.76
SPARC-208ENST00000538026 ZKSCAN4Q969J2 545 aaPredicted RBP10.29□□□□□ -0.76
SPARC-208ENST00000538026 WNK4Q96J92 1243 aa10.29□□□□□ -0.76
SPARC-208ENST00000538026 CHMP4BQ9H444 224 aaKnown RBP10.29□□□□□ -0.76
SPARC-208ENST00000538026 RNF186Q9NXI6 227 aa10.29□□□□□ -0.76
SPARC-208ENST00000538026 LRP2BPQ9P2M1 347 aa10.29□□□□□ -0.76
SPARC-208ENST00000538026 ZNF112Q9UJU3 913 aa10.29□□□□□ -0.76
SPARC-208ENST00000538026 MAST2Q6P0Q8 1798 aa10.29□□□□□ -0.76
SPARC-208ENST00000538026 RPAP1Q9BWH6 1393 aaPredicted RBP10.28□□□□□ -0.76
SPARC-208ENST00000538026 INPP5BP32019 993 aa10.28□□□□□ -0.76
SPARC-208ENST00000538026 TNNI2P48788 182 aa10.28□□□□□ -0.76
SPARC-208ENST00000538026 DYNLL1P63167 89 aaKnown RBP10.28□□□□□ -0.76
SPARC-208ENST00000538026 MAP3K9P80192 1104 aa10.28□□□□□ -0.76
SPARC-208ENST00000538026 RRP1BQ14684 758 aaKnown RBP10.28□□□□□ -0.76
SPARC-208ENST00000538026 CLASRPQ8N2M8 674 aaKnown RBP10.28□□□□□ -0.76
SPARC-208ENST00000538026 EXOC6Q8TAG9 804 aa10.28□□□□□ -0.76
SPARC-208ENST00000538026 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.28□□□□□ -0.76
SPARC-208ENST00000538026 SLC10A4Q96EP9 437 aa10.28□□□□□ -0.76
SPARC-208ENST00000538026 MS4A4AQ96JQ5 239 aa10.28□□□□□ -0.76
SPARC-208ENST00000538026 PTPN18Q99952 460 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms