RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 GMNNO75496 209 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 USP26Q9BXU7 913 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 TTF2Q9UNY4 1162 aaKnown RBP6.33□□□□□ -1.4
CSMD1-215ENST00000537824 ZNF644Q9H582 1327 aaPredicted RBP6.33□□□□□ -1.4
CSMD1-215ENST00000537824 ANKRD50Q9ULJ7 1429 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 MYL6BP14649 208 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 KLHL7Q8IXQ5 586 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 CCDC197Q8NCU1 140 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 SAAL1Q96ER3 474 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 SLC12A5Q9H2X9 1139 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 BCAS4Q8TDM0 211 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 NLRP2Q9NX02 1062 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 IMPACTQ9P2X3 320 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 SCOCQ9UIL1 159 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 EHBP1L1Q8N3D4 1523 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 CEP250Q9BV73 2442 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 PSMA7O14818 248 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 TRIM6Q9C030 488 aaPredicted RBP6.33□□□□□ -1.4
CSMD1-215ENST00000537824 ECHDC1Q9NTX5 307 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 ARL1P40616 181 aaPredicted RBP6.33□□□□□ -1.4
CSMD1-215ENST00000537824 TAOK1Q7L7X3 1001 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 CCDC65Q8IXS2 484 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 SMC1BQ8NDV3 1235 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 RABGGTAQ92696 567 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 SLF1Q9BQI6 1058 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 Q9H521 79 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 LRP2BPQ9P2M1 347 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 ZNF530Q6P9A1 599 aaPredicted RBP6.33□□□□□ -1.4
CSMD1-215ENST00000537824 ALG1Q9BT22 464 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 CXorf56Q9H5V9 222 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 SYNCQ9H7C4 482 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 HFM1A2PYH4 1435 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 FAM133BQ5BKY9 247 aaKnown RBP6.33□□□□□ -1.4
CSMD1-215ENST00000537824 ARHGAP42A6NI28 874 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 DHX58Q96C10 678 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 KIF20BQ96Q89 1820 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 F6X3S4 739 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 MYO1CO00159 1063 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 MCM7P33993 719 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 MTMR3Q13615 1198 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 TERF2Q15554 542 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 ARMC2Q8NEN0 867 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 NCAPGQ9BPX3 1015 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 ZRANB1Q9UGI0 708 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 ZMYM4Q5VZL5 1548 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 ARHGAP6O43182 974 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 AMPD3Q01432 767 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 PPP1R21Q6ZMI0 780 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 CCDC85AQ96PX6 553 aaPredicted RBP6.33□□□□□ -1.4
CSMD1-215ENST00000537824 CASKIN1Q8WXD9 1431 aa6.33□□□□□ -1.4
CSMD1-215ENST00000537824 CEP104O60308 925 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 RANBP6O60518 1105 aaKnown RBP6.32□□□□□ -1.4
CSMD1-215ENST00000537824 ZNF711Q9Y462 761 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 KLF18A0A0U1RQI7 1052 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 DNAJC8O75937 253 aaPredicted RBP6.32□□□□□ -1.4
CSMD1-215ENST00000537824 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.32□□□□□ -1.4
CSMD1-215ENST00000537824 Q6ZUG5 572 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 EVI5LQ96CN4 794 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 INTS4Q96HW7 963 aaKnown RBP6.32□□□□□ -1.4
CSMD1-215ENST00000537824 PDHA1P08559 390 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 CLUL1Q15846 466 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 KSR1Q8IVT5 923 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 MTUS1Q9ULD2 1270 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 SPECC1L-ADORA2AF8WAN1 911 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 GUCY2CP25092 1073 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 IARSP41252 1262 aaKnown RBP6.32□□□□□ -1.4
CSMD1-215ENST00000537824 RAD51AP2Q09MP3 1159 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 A0A1B0GVL5 298 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 RNF40O75150 1001 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 CALCOCO2Q13137 446 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 ANKRD36BQ8N2N9 1353 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 MAP3K21Q5TCX8 1036 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 CCDC8Q9H0W5 538 aaPredicted RBP6.32□□□□□ -1.4
CSMD1-215ENST00000537824 ERBB4Q15303 1308 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 PLCB3Q01970 1234 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 GNPTABQ3T906 1256 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 GAS2L3Q86XJ1 694 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 EFCAB8A8MWE9 144 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 SUN1O94901 812 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 CPA1P15085 419 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 G3BP2Q9UN86 482 aaKnown RBP6.32□□□□□ -1.4
CSMD1-215ENST00000537824 APC2O95996 2303 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 PDE6BP35913 854 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 FBXO38Q6PIJ6 1188 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 PRPF38AQ8NAV1 312 aaKnown RBP6.32□□□□□ -1.4
CSMD1-215ENST00000537824 BICD1Q96G01 975 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 XPO4Q9C0E2 1151 aaKnown RBP6.32□□□□□ -1.4
CSMD1-215ENST00000537824 CAPRIN2Q6IMN6 1127 aaKnown RBP6.32□□□□□ -1.4
CSMD1-215ENST00000537824 KCNV2Q8TDN2 545 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 C9orf84Q5VXU9 1444 aa6.32□□□□□ -1.4
CSMD1-215ENST00000537824 EIF3CLB5ME19 914 aaKnown RBP6.31□□□□□ -1.4
CSMD1-215ENST00000537824 TBCAO75347 108 aaKnown RBP6.31□□□□□ -1.4
CSMD1-215ENST00000537824 ECM2O94769 699 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-215ENST00000537824 IRX1P78414 480 aaPredicted RBP6.31□□□□□ -1.4
CSMD1-215ENST00000537824 EIF3CQ99613 913 aaKnown RBP6.31□□□□□ -1.4
CSMD1-215ENST00000537824 RBM8AQ9Y5S9 174 aaKnown RBP6.31□□□□□ -1.4
CSMD1-215ENST00000537824 TTC21AQ8NDW8 1320 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 RTN1Q16799 776 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 RAPGEF4Q8WZA2 1011 aa6.31□□□□□ -1.4
CSMD1-215ENST00000537824 DDX41Q9UJV9 622 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms