RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.2■□□□□ 0.5
USP28-204ENST00000537642 EXOC6BQ9Y2D4 811 aa18.2■□□□□ 0.5
USP28-204ENST00000537642 GAKO14976 1311 aa18.2■□□□□ 0.5
USP28-204ENST00000537642 CASP8AP2Q9UKL3 1982 aa18.19■□□□□ 0.5
USP28-204ENST00000537642 UNCXA6NJT0 531 aa18.19■□□□□ 0.5
USP28-204ENST00000537642 IREB2P48200 963 aaKnown RBP18.19■□□□□ 0.5
USP28-204ENST00000537642 TBC1D9Q6ZT07 1266 aa18.19■□□□□ 0.5
USP28-204ENST00000537642 ERICH6Q7L0X2 663 aa18.19■□□□□ 0.5
USP28-204ENST00000537642 DZIP1Q86YF9 867 aaKnown RBP18.19■□□□□ 0.5
USP28-204ENST00000537642 SIRT2Q8IXJ6 389 aa18.19■□□□□ 0.5
USP28-204ENST00000537642 RPAP2Q8IXW5 612 aaPredicted RBP18.19■□□□□ 0.5
USP28-204ENST00000537642 ZNF384Q8TF68 577 aa18.19■□□□□ 0.5
USP28-204ENST00000537642 EAF2Q96CJ1 260 aaPredicted RBP18.19■□□□□ 0.5
USP28-204ENST00000537642 SLC10A4Q96EP9 437 aa18.19■□□□□ 0.5
USP28-204ENST00000537642 RNF186Q9NXI6 227 aa18.19■□□□□ 0.5
USP28-204ENST00000537642 MECOMQ03112 1051 aa18.18■□□□□ 0.5
USP28-204ENST00000537642 NFIAQ12857 509 aa18.18■□□□□ 0.5
USP28-204ENST00000537642 TTC39AQ5SRH9 613 aa18.18■□□□□ 0.5
USP28-204ENST00000537642 SPRYD7Q5W111 196 aa18.18■□□□□ 0.5
USP28-204ENST00000537642 FAM163AQ96GL9 167 aaPredicted RBP18.18■□□□□ 0.5
USP28-204ENST00000537642 USP40Q9NVE5 1235 aa18.18■□□□□ 0.5
USP28-204ENST00000537642 SAGE1Q9NXZ1 904 aa18.18■□□□□ 0.5
USP28-204ENST00000537642 TLR7Q9NYK1 1049 aaKnown RBP18.18■□□□□ 0.5
USP28-204ENST00000537642 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.18■□□□□ 0.5
USP28-204ENST00000537642 DBNLQ9UJU6 430 aaKnown RBP18.18■□□□□ 0.5
USP28-204ENST00000537642 AK9Q5TCS8 1911 aa18.17■□□□□ 0.5
USP28-204ENST00000537642 RPAP1Q9BWH6 1393 aaPredicted RBP18.17■□□□□ 0.5
USP28-204ENST00000537642 TRPA1O75762 1119 aa18.17■□□□□ 0.5
USP28-204ENST00000537642 CCDC158Q5M9N0 1113 aa18.17■□□□□ 0.5
USP28-204ENST00000537642 ERC1Q8IUD2 1116 aa18.17■□□□□ 0.5
USP28-204ENST00000537642 ANKRD13AQ8IZ07 590 aa18.17■□□□□ 0.5
USP28-204ENST00000537642 FAM151AQ8WW52 585 aa18.17■□□□□ 0.5
USP28-204ENST00000537642 WNK4Q96J92 1243 aa18.17■□□□□ 0.5
USP28-204ENST00000537642 CCDC8Q9H0W5 538 aaPredicted RBP18.17■□□□□ 0.5
USP28-204ENST00000537642 CHMP4BQ9H444 224 aaKnown RBP18.17■□□□□ 0.5
USP28-204ENST00000537642 SNRKQ9NRH2 765 aa18.17■□□□□ 0.5
USP28-204ENST00000537642 FAM198AQ9UFP1 575 aa18.17■□□□□ 0.5
USP28-204ENST00000537642 MYO5AQ9Y4I1 1855 aaKnown RBP18.16■□□□□ 0.5
USP28-204ENST00000537642 TM4SF4P48230 202 aa18.16■□□□□ 0.5
USP28-204ENST00000537642 TCP10Q12799 353 aa18.16■□□□□ 0.5
USP28-204ENST00000537642 SLF2Q8IX21 1173 aa18.16■□□□□ 0.5
USP28-204ENST00000537642 ZNF512BQ96KM6 892 aaPredicted RBP18.16■□□□□ 0.5
USP28-204ENST00000537642 LAMB1P07942 1786 aa18.16■□□□□ 0.5
USP28-204ENST00000537642 MROH7-TTC4A0A0A0MT08 1334 aa18.16■□□□□ 0.5
USP28-204ENST00000537642 HMMRO75330 724 aa18.15■□□□□ 0.5
USP28-204ENST00000537642 GJA5P36382 358 aa18.15■□□□□ 0.5
USP28-204ENST00000537642 HSP90AB4PQ58FF6 505 aa18.15■□□□□ 0.5
USP28-204ENST00000537642 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.15■□□□□ 0.5
USP28-204ENST00000537642 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.15■□□□□ 0.5
USP28-204ENST00000537642 RHPN1Q8TCX5 695 aa18.15■□□□□ 0.5
USP28-204ENST00000537642 NSUN4Q96CB9 384 aaKnown RBP18.15■□□□□ 0.5
USP28-204ENST00000537642 YTHDC1Q96MU7 727 aaKnown RBP18.15■□□□□ 0.5
USP28-204ENST00000537642 RFX7Q2KHR2 1363 aa18.15■□□□□ 0.5
USP28-204ENST00000537642 GPR75-ASB3A0A0A6YYF3 556 aa18.14■□□□□ 0.49
USP28-204ENST00000537642 ZBTB48P10074 688 aaPredicted RBP18.14■□□□□ 0.49
USP28-204ENST00000537642 BTDP43251 543 aa18.14■□□□□ 0.49
USP28-204ENST00000537642 MAP3K9P80192 1104 aa18.14■□□□□ 0.49
USP28-204ENST00000537642 ZFPM1Q8IX07 1006 aa18.14■□□□□ 0.49
USP28-204ENST00000537642 IDI2Q9BXS1 227 aa18.14■□□□□ 0.49
USP28-204ENST00000537642 ELP3Q9H9T3 547 aa18.14■□□□□ 0.49
USP28-204ENST00000537642 IL1RAPL2Q9NP60 686 aa18.14■□□□□ 0.49
USP28-204ENST00000537642 RAI14Q9P0K7 980 aa18.14■□□□□ 0.49
USP28-204ENST00000537642 CYP2E1P05181 493 aaPredicted RBP18.13■□□□□ 0.49
USP28-204ENST00000537642 SREBF2Q12772 1141 aa18.13■□□□□ 0.49
USP28-204ENST00000537642 VGLL4Q14135 290 aa18.13■□□□□ 0.49
USP28-204ENST00000537642 AACSQ86V21 672 aa18.13■□□□□ 0.49
USP28-204ENST00000537642 HOOK2Q96ED9 719 aa18.13■□□□□ 0.49
USP28-204ENST00000537642 LRP2BPQ9P2M1 347 aa18.13■□□□□ 0.49
USP28-204ENST00000537642 MAST2Q6P0Q8 1798 aa18.12■□□□□ 0.49
USP28-204ENST00000537642 MANSC4A6NHS7 340 aaPredicted RBP18.12■□□□□ 0.49
USP28-204ENST00000537642 APBB1O00213 710 aa18.12■□□□□ 0.49
USP28-204ENST00000537642 WDHD1O75717 1129 aaPredicted RBP18.12■□□□□ 0.49
USP28-204ENST00000537642 ZAP70P43403 619 aa18.12■□□□□ 0.49
USP28-204ENST00000537642 RGS3P49796 1198 aa18.12■□□□□ 0.49
USP28-204ENST00000537642 RHBDL3P58872 404 aa18.12■□□□□ 0.49
USP28-204ENST00000537642 GSTO1P78417 241 aa18.12■□□□□ 0.49
USP28-204ENST00000537642 DCAF15Q66K64 600 aa18.12■□□□□ 0.49
USP28-204ENST00000537642 MIGA2Q7L4E1 593 aa18.12■□□□□ 0.49
USP28-204ENST00000537642 OPTNQ96CV9 577 aa18.12■□□□□ 0.49
USP28-204ENST00000537642 KIF1BPQ96EK5 621 aa18.12■□□□□ 0.49
USP28-204ENST00000537642 ENTPD3O75355 529 aa18.11■□□□□ 0.49
USP28-204ENST00000537642 LDHCP07864 332 aa18.11■□□□□ 0.49
USP28-204ENST00000537642 CNKSR2Q8WXI2 1034 aa18.11■□□□□ 0.49
USP28-204ENST00000537642 WRNIP1Q96S55 665 aa18.11■□□□□ 0.49
USP28-204ENST00000537642 ZNF341Q9BYN7 854 aa18.11■□□□□ 0.49
USP28-204ENST00000537642 DDX4Q9NQI0 724 aaKnown RBP18.11■□□□□ 0.49
USP28-204ENST00000537642 PIH1D3Q9NQM4 214 aaKnown RBP18.11■□□□□ 0.49
USP28-204ENST00000537642 CSADQ9Y600 493 aa18.11■□□□□ 0.49
USP28-204ENST00000537642 DOCK2Q92608 1830 aa18.11■□□□□ 0.49
USP28-204ENST00000537642 RAB11FIP3O75154 756 aa18.1■□□□□ 0.49
USP28-204ENST00000537642 TBC1D8O95759 1140 aa18.1■□□□□ 0.49
USP28-204ENST00000537642 SH3BP5LQ7L8J4 393 aa18.1■□□□□ 0.49
USP28-204ENST00000537642 SNCAIPQ9Y6H5 919 aa18.1■□□□□ 0.49
USP28-204ENST00000537642 ATRNL1Q5VV63 1379 aa18.09■□□□□ 0.49
USP28-204ENST00000537642 RRP1P56182 461 aaKnown RBP18.09■□□□□ 0.49
USP28-204ENST00000537642 INHBEP58166 350 aa18.09■□□□□ 0.49
USP28-204ENST00000537642 PICALMQ13492 652 aa18.09■□□□□ 0.49
USP28-204ENST00000537642 NAA16Q6N069 864 aaPredicted RBP18.09■□□□□ 0.49
USP28-204ENST00000537642 CLASRPQ8N2M8 674 aaKnown RBP18.09■□□□□ 0.49
USP28-204ENST00000537642 ZKSCAN4Q969J2 545 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms