RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 ERO1BQ86YB8 467 aa12.03□□□□□ -0.48
CHD4-207ENST00000537634 BRI3BPQ8WY22 251 aa12.03□□□□□ -0.48
CHD4-207ENST00000537634 ARHGAP45Q92619 1136 aa12.03□□□□□ -0.48
CHD4-207ENST00000537634 COPRSQ9NQ92 184 aa12.03□□□□□ -0.48
CHD4-207ENST00000537634 DAGLAQ9Y4D2 1042 aa12.03□□□□□ -0.48
CHD4-207ENST00000537634 SNCAIPQ9Y6H5 919 aa12.03□□□□□ -0.48
CHD4-207ENST00000537634 SALL1Q9NSC2 1324 aa12.03□□□□□ -0.48
CHD4-207ENST00000537634 WDHD1O75717 1129 aaPredicted RBP12.02□□□□□ -0.49
CHD4-207ENST00000537634 CETPP11597 493 aa12.02□□□□□ -0.49
CHD4-207ENST00000537634 TCP10Q12799 353 aa12.02□□□□□ -0.49
CHD4-207ENST00000537634 INTS3Q68E01 1043 aaKnown RBP12.02□□□□□ -0.49
CHD4-207ENST00000537634 ZGPATQ8N5A5 531 aaKnown RBP12.02□□□□□ -0.49
CHD4-207ENST00000537634 FAM151AQ8WW52 585 aa12.02□□□□□ -0.49
CHD4-207ENST00000537634 ZKSCAN4Q969J2 545 aaPredicted RBP12.02□□□□□ -0.49
CHD4-207ENST00000537634 ZNF341Q9BYN7 854 aa12.02□□□□□ -0.49
CHD4-207ENST00000537634 EFCC1Q9HA90 598 aa12.02□□□□□ -0.49
CHD4-207ENST00000537634 ZFYVE28Q9HCC9 887 aa12.02□□□□□ -0.49
CHD4-207ENST00000537634 MYH2Q9UKX2 1941 aa12.01□□□□□ -0.49
CHD4-207ENST00000537634 IPO8O15397 1037 aaKnown RBP12.01□□□□□ -0.49
CHD4-207ENST00000537634 SRGAP3O43295 1099 aa12.01□□□□□ -0.49
CHD4-207ENST00000537634 ADORA1P30542 326 aa12.01□□□□□ -0.49
CHD4-207ENST00000537634 PPIL2Q13356 520 aa12.01□□□□□ -0.49
CHD4-207ENST00000537634 SNAPC2Q13487 334 aa12.01□□□□□ -0.49
CHD4-207ENST00000537634 CCDC102BQ68D86 513 aa12.01□□□□□ -0.49
CHD4-207ENST00000537634 CDC42EP5Q6NZY7 148 aa12.01□□□□□ -0.49
CHD4-207ENST00000537634 MIGA2Q7L4E1 593 aa12.01□□□□□ -0.49
CHD4-207ENST00000537634 FAM43AQ8N2R8 423 aa12.01□□□□□ -0.49
CHD4-207ENST00000537634 PTPN22Q9Y2R2 807 aa12.01□□□□□ -0.49
CHD4-207ENST00000537634 DOCK2Q92608 1830 aa12.01□□□□□ -0.49
CHD4-207ENST00000537634 IRF6O14896 467 aa12□□□□□ -0.49
CHD4-207ENST00000537634 NFIAQ12857 509 aa12□□□□□ -0.49
CHD4-207ENST00000537634 ARHGEF6Q15052 776 aa12□□□□□ -0.49
CHD4-207ENST00000537634 DZIP1Q86YF9 867 aaKnown RBP12□□□□□ -0.49
CHD4-207ENST00000537634 FRAT1Q92837 279 aaPredicted RBP12□□□□□ -0.49
CHD4-207ENST00000537634 USP40Q9NVE5 1235 aa12□□□□□ -0.49
CHD4-207ENST00000537634 AKAP2Q9Y2D5 859 aa12□□□□□ -0.49
CHD4-207ENST00000537634 RBBP6Q7Z6E9 1792 aaKnown RBP12□□□□□ -0.49
CHD4-207ENST00000537634 ZBTB22O15209 634 aa11.99□□□□□ -0.49
CHD4-207ENST00000537634 TRIM27P14373 513 aa11.99□□□□□ -0.49
CHD4-207ENST00000537634 INPP5BP32019 993 aa11.99□□□□□ -0.49
CHD4-207ENST00000537634 TIMM10P62072 90 aa11.99□□□□□ -0.49
CHD4-207ENST00000537634 PPATQ06203 517 aa11.99□□□□□ -0.49
CHD4-207ENST00000537634 TFCP2Q12800 502 aa11.99□□□□□ -0.49
CHD4-207ENST00000537634 MTX1Q13505 466 aa11.99□□□□□ -0.49
CHD4-207ENST00000537634 RASGRF1Q13972 1273 aa11.99□□□□□ -0.49
CHD4-207ENST00000537634 MVPQ14764 893 aaKnown RBP11.99□□□□□ -0.49
CHD4-207ENST00000537634 SLF2Q8IX21 1173 aa11.99□□□□□ -0.49
CHD4-207ENST00000537634 ZCCHC17Q9NP64 241 aaKnown RBP11.99□□□□□ -0.49
CHD4-207ENST00000537634 ABCF2Q9UG63 623 aa11.99□□□□□ -0.49
CHD4-207ENST00000537634 PDS5AQ29RF7 1337 aaKnown RBP11.99□□□□□ -0.49
CHD4-207ENST00000537634 GAKO14976 1311 aa11.98□□□□□ -0.49
CHD4-207ENST00000537634 A0A1B0GUL7 405 aa11.98□□□□□ -0.49
CHD4-207ENST00000537634 BTBD19C9JJ37 291 aa11.98□□□□□ -0.49
CHD4-207ENST00000537634 GNAI2P04899 355 aa11.98□□□□□ -0.49
CHD4-207ENST00000537634 SPTY2D1Q68D10 685 aaPredicted RBP11.98□□□□□ -0.49
CHD4-207ENST00000537634 ATF7IPQ6VMQ6 1270 aa11.98□□□□□ -0.49
CHD4-207ENST00000537634 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.98□□□□□ -0.49
CHD4-207ENST00000537634 XAGE2Q96GT9 111 aa11.98□□□□□ -0.49
CHD4-207ENST00000537634 FAM198AQ9UFP1 575 aa11.98□□□□□ -0.49
CHD4-207ENST00000537634 TLR2O60603 784 aa11.97□□□□□ -0.49
CHD4-207ENST00000537634 BCAR3O75815 825 aa11.97□□□□□ -0.49
CHD4-207ENST00000537634 SLC34A2O95436 690 aa11.97□□□□□ -0.49
CHD4-207ENST00000537634 RGS3P49796 1198 aa11.97□□□□□ -0.49
CHD4-207ENST00000537634 CAP1Q01518 475 aa11.97□□□□□ -0.49
CHD4-207ENST00000537634 KIF22Q14807 665 aa11.97□□□□□ -0.49
CHD4-207ENST00000537634 NOL9Q5SY16 702 aaKnown RBP11.97□□□□□ -0.49
CHD4-207ENST00000537634 GORABQ5T7V8 394 aa11.97□□□□□ -0.49
CHD4-207ENST00000537634 PRPF38BQ5VTL8 546 aaKnown RBP11.97□□□□□ -0.49
CHD4-207ENST00000537634 ZSCAN29Q8IWY8 852 aaPredicted RBP11.97□□□□□ -0.49
CHD4-207ENST00000537634 CLUAP1Q96AJ1 413 aa11.97□□□□□ -0.49
CHD4-207ENST00000537634 ARMC5Q96C12 935 aa11.97□□□□□ -0.49
CHD4-207ENST00000537634 NEUROD6Q96NK8 337 aa11.97□□□□□ -0.49
CHD4-207ENST00000537634 ZNF112Q9UJU3 913 aa11.97□□□□□ -0.49
CHD4-207ENST00000537634 RFX7Q2KHR2 1363 aa11.96□□□□□ -0.49
CHD4-207ENST00000537634 TNRC18O15417 2968 aaPredicted RBP11.96□□□□□ -0.49
CHD4-207ENST00000537634 MROH7-TTC4A0A0A0MT08 1334 aa11.96□□□□□ -0.49
CHD4-207ENST00000537634 ZSWIM8A7E2V4 1837 aa11.96□□□□□ -0.49
CHD4-207ENST00000537634 ENTPD3O75355 529 aa11.96□□□□□ -0.49
CHD4-207ENST00000537634 SLC9C1Q4G0N8 1177 aa11.96□□□□□ -0.49
CHD4-207ENST00000537634 ERICH6Q7L0X2 663 aa11.96□□□□□ -0.49
CHD4-207ENST00000537634 IDI2Q9BXS1 227 aa11.96□□□□□ -0.49
CHD4-207ENST00000537634 TNNQ9UQP3 1299 aa11.96□□□□□ -0.49
CHD4-207ENST00000537634 ATRNL1Q5VV63 1379 aa11.95□□□□□ -0.5
CHD4-207ENST00000537634 POTEFA5A3E0 1075 aa11.95□□□□□ -0.5
CHD4-207ENST00000537634 PDHXO00330 501 aa11.95□□□□□ -0.5
CHD4-207ENST00000537634 BTDP43251 543 aa11.95□□□□□ -0.5
CHD4-207ENST00000537634 LACTBP83111 547 aaPredicted RBP11.95□□□□□ -0.5
CHD4-207ENST00000537634 G3BP1Q13283 466 aaKnown RBP eCLIP11.95□□□□□ -0.51e-6■■□□□ 11.6
CHD4-207ENST00000537634 PICALMQ13492 652 aa11.95□□□□□ -0.5
CHD4-207ENST00000537634 ZKSCAN2Q63HK3 967 aa11.95□□□□□ -0.5
CHD4-207ENST00000537634 ANKRD23Q86SG2 305 aa11.95□□□□□ -0.5
CHD4-207ENST00000537634 NBPF11Q86T75 865 aa11.95□□□□□ -0.5
CHD4-207ENST00000537634 ZFPM1Q8IX07 1006 aa11.95□□□□□ -0.5
CHD4-207ENST00000537634 FAM163AQ96GL9 167 aaPredicted RBP11.95□□□□□ -0.5
CHD4-207ENST00000537634 PICK1Q9NRD5 415 aa11.95□□□□□ -0.5
CHD4-207ENST00000537634 KCNH4Q9UQ05 1017 aa11.95□□□□□ -0.5
CHD4-207ENST00000537634 PTCH2Q9Y6C5 1203 aa11.95□□□□□ -0.5
CHD4-207ENST00000537634 DOCK1Q14185 1865 aa11.95□□□□□ -0.5
CHD4-207ENST00000537634 PNMA6EA0A0J9YXQ4 647 aa11.94□□□□□ -0.5
CHD4-207ENST00000537634 GNRH1P01148 92 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms