RNA–Protein interactions for RNA: ENST00000537533.1

PTPN6-209, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 673 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-209ENST00000537533 BEGAINQ9BUH8 593 aa15.34■□□□□ 0.05
PTPN6-209ENST00000537533 TMEM39BQ9GZU3 492 aa15.34■□□□□ 0.05
PTPN6-209ENST00000537533 PRDM10Q9NQV6 1147 aa15.34■□□□□ 0.05
PTPN6-209ENST00000537533 DBNLQ9UJU6 430 aaKnown RBP15.34■□□□□ 0.05
PTPN6-209ENST00000537533 AK9Q5TCS8 1911 aa15.34■□□□□ 0.05
PTPN6-209ENST00000537533 RPAP1Q9BWH6 1393 aaPredicted RBP15.34■□□□□ 0.05
PTPN6-209ENST00000537533 IGSF3O75054 1194 aa15.33■□□□□ 0.04
PTPN6-209ENST00000537533 USP2O75604 605 aaPredicted RBP15.33■□□□□ 0.04
PTPN6-209ENST00000537533 HSPA8P11142 646 aaKnown RBP15.33■□□□□ 0.04
PTPN6-209ENST00000537533 CACNB3P54284 484 aa15.33■□□□□ 0.04
PTPN6-209ENST00000537533 PRKG1Q13976 671 aa15.33■□□□□ 0.04
PTPN6-209ENST00000537533 TTC39AQ5SRH9 613 aa15.33■□□□□ 0.04
PTPN6-209ENST00000537533 PI16Q6UXB8 463 aa15.33■□□□□ 0.04
PTPN6-209ENST00000537533 DZIP1Q86YF9 867 aaKnown RBP15.33■□□□□ 0.04
PTPN6-209ENST00000537533 SLF2Q8IX21 1173 aa15.33■□□□□ 0.04
PTPN6-209ENST00000537533 RHPN1Q8TCX5 695 aa15.33■□□□□ 0.04
PTPN6-209ENST00000537533 YTHDC1Q96MU7 727 aaKnown RBP15.33■□□□□ 0.04
PTPN6-209ENST00000537533 MAST2Q6P0Q8 1798 aa15.32■□□□□ 0.04
PTPN6-209ENST00000537533 IREB2P48200 963 aaKnown RBP15.32■□□□□ 0.04
PTPN6-209ENST00000537533 COL13A1Q5TAT6 717 aaPredicted RBP15.32■□□□□ 0.04
PTPN6-209ENST00000537533 CDAN1Q8IWY9 1227 aa15.32■□□□□ 0.04
PTPN6-209ENST00000537533 ZNF384Q8TF68 577 aa15.32■□□□□ 0.04
PTPN6-209ENST00000537533 NSUN4Q96CB9 384 aaKnown RBP15.32■□□□□ 0.04
PTPN6-209ENST00000537533 KIF1BPQ96EK5 621 aa15.32■□□□□ 0.04
PTPN6-209ENST00000537533 CSRNP1Q96S65 589 aa15.32■□□□□ 0.04
PTPN6-209ENST00000537533 CCDC8Q9H0W5 538 aaPredicted RBP15.32■□□□□ 0.04
PTPN6-209ENST00000537533 TLR7Q9NYK1 1049 aaKnown RBP15.32■□□□□ 0.04
PTPN6-209ENST00000537533 FZD1Q9UP38 647 aa15.32■□□□□ 0.04
PTPN6-209ENST00000537533 GPR75-ASB3A0A0A6YYF3 556 aa15.31■□□□□ 0.04
PTPN6-209ENST00000537533 RAB11FIP3O75154 756 aa15.31■□□□□ 0.04
PTPN6-209ENST00000537533 RRP1P56182 461 aaKnown RBP15.31■□□□□ 0.04
PTPN6-209ENST00000537533 MECOMQ03112 1051 aa15.31■□□□□ 0.04
PTPN6-209ENST00000537533 TBC1D9Q6ZT07 1266 aa15.31■□□□□ 0.04
PTPN6-209ENST00000537533 FAM151AQ8WW52 585 aa15.31■□□□□ 0.04
PTPN6-209ENST00000537533 IDI2Q9BXS1 227 aa15.31■□□□□ 0.04
PTPN6-209ENST00000537533 USP40Q9NVE5 1235 aa15.31■□□□□ 0.04
PTPN6-209ENST00000537533 MROH7-TTC4A0A0A0MT08 1334 aa15.31■□□□□ 0.04
PTPN6-209ENST00000537533 LBX1P52954 281 aa15.3■□□□□ 0.04
PTPN6-209ENST00000537533 GSTO1P78417 241 aa15.3■□□□□ 0.04
PTPN6-209ENST00000537533 NFIAQ12857 509 aa15.3■□□□□ 0.04
PTPN6-209ENST00000537533 RFX7Q2KHR2 1363 aa15.3■□□□□ 0.04
PTPN6-209ENST00000537533 AACSQ86V21 672 aa15.3■□□□□ 0.04
PTPN6-209ENST00000537533 ANKRD13AQ8IZ07 590 aa15.3■□□□□ 0.04
PTPN6-209ENST00000537533 DOCK2Q92608 1830 aa15.3■□□□□ 0.04
PTPN6-209ENST00000537533 HOOK2Q96ED9 719 aa15.3■□□□□ 0.04
PTPN6-209ENST00000537533 SAGE1Q9NXZ1 904 aa15.3■□□□□ 0.04
PTPN6-209ENST00000537533 CASP8AP2Q9UKL3 1982 aa15.29■□□□□ 0.04
PTPN6-209ENST00000537533 MAP4K4O95819 1239 aaPredicted RBP15.29■□□□□ 0.04
PTPN6-209ENST00000537533 CYP2E1P05181 493 aaPredicted RBP15.29■□□□□ 0.04
PTPN6-209ENST00000537533 LDHCP07864 332 aa15.29■□□□□ 0.04
PTPN6-209ENST00000537533 BTDP43251 543 aa15.29■□□□□ 0.04
PTPN6-209ENST00000537533 TM4SF4P48230 202 aa15.29■□□□□ 0.04
PTPN6-209ENST00000537533 SPRYD7Q5W111 196 aa15.29■□□□□ 0.04
PTPN6-209ENST00000537533 CLASRPQ8N2M8 674 aaKnown RBP15.29■□□□□ 0.04
PTPN6-209ENST00000537533 SLC10A4Q96EP9 437 aa15.29■□□□□ 0.04
PTPN6-209ENST00000537533 CLMNQ96JQ2 1002 aa15.29■□□□□ 0.04
PTPN6-209ENST00000537533 IL1RAPL2Q9NP60 686 aa15.29■□□□□ 0.04
PTPN6-209ENST00000537533 SNRKQ9NRH2 765 aa15.29■□□□□ 0.04
PTPN6-209ENST00000537533 FAM198AQ9UFP1 575 aa15.29■□□□□ 0.04
PTPN6-209ENST00000537533 ENTPD3O75355 529 aa15.28■□□□□ 0.04
PTPN6-209ENST00000537533 NPM3O75607 178 aaKnown RBP15.28■□□□□ 0.04
PTPN6-209ENST00000537533 ZBTB48P10074 688 aaPredicted RBP15.28■□□□□ 0.04
PTPN6-209ENST00000537533 RHBDL3P58872 404 aa15.28■□□□□ 0.04
PTPN6-209ENST00000537533 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.28■□□□□ 0.04
PTPN6-209ENST00000537533 RAI14Q9P0K7 980 aa15.28■□□□□ 0.04
PTPN6-209ENST00000537533 LRP2BPQ9P2M1 347 aa15.28■□□□□ 0.04
PTPN6-209ENST00000537533 CDK5RAP2Q96SN8 1893 aa15.28■□□□□ 0.04
PTPN6-209ENST00000537533 FOCADQ5VW36 1801 aa15.27■□□□□ 0.04
PTPN6-209ENST00000537533 WDHD1O75717 1129 aaPredicted RBP15.27■□□□□ 0.04
PTPN6-209ENST00000537533 ZAP70P43403 619 aa15.27■□□□□ 0.04
PTPN6-209ENST00000537533 MAP3K9P80192 1104 aa15.27■□□□□ 0.04
PTPN6-209ENST00000537533 DCAF15Q66K64 600 aa15.27■□□□□ 0.04
PTPN6-209ENST00000537533 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.27■□□□□ 0.04
PTPN6-209ENST00000537533 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.27■□□□□ 0.04
PTPN6-209ENST00000537533 WNK4Q96J92 1243 aa15.27■□□□□ 0.04
PTPN6-209ENST00000537533 RNF186Q9NXI6 227 aa15.27■□□□□ 0.04
PTPN6-209ENST00000537533 RGS3P49796 1198 aa15.26■□□□□ 0.03
PTPN6-209ENST00000537533 SREBF2Q12772 1141 aa15.26■□□□□ 0.03
PTPN6-209ENST00000537533 TCP10Q12799 353 aa15.26■□□□□ 0.03
PTPN6-209ENST00000537533 DCTPP1Q9H773 170 aa15.26■□□□□ 0.03
PTPN6-209ENST00000537533 PIH1D3Q9NQM4 214 aaKnown RBP15.26■□□□□ 0.03
PTPN6-209ENST00000537533 MANSC4A6NHS7 340 aaPredicted RBP15.25■□□□□ 0.03
PTPN6-209ENST00000537533 APBB1O00213 710 aa15.25■□□□□ 0.03
PTPN6-209ENST00000537533 INHBEP58166 350 aa15.25■□□□□ 0.03
PTPN6-209ENST00000537533 PPP4CP60510 307 aa15.25■□□□□ 0.03
PTPN6-209ENST00000537533 MKRN3Q13064 507 aaKnown RBP15.25■□□□□ 0.03
PTPN6-209ENST00000537533 VGLL4Q14135 290 aa15.25■□□□□ 0.03
PTPN6-209ENST00000537533 NAA16Q6N069 864 aaPredicted RBP15.25■□□□□ 0.03
PTPN6-209ENST00000537533 TMED8Q6PL24 325 aaPredicted RBP15.25■□□□□ 0.03
PTPN6-209ENST00000537533 ZFPM1Q8IX07 1006 aa15.25■□□□□ 0.03
PTPN6-209ENST00000537533 ZNF341Q9BYN7 854 aa15.25■□□□□ 0.03
PTPN6-209ENST00000537533 DDX4Q9NQI0 724 aaKnown RBP15.25■□□□□ 0.03
PTPN6-209ENST00000537533 TSKSQ9UJT2 592 aa15.25■□□□□ 0.03
PTPN6-209ENST00000537533 ZNF112Q9UJU3 913 aa15.25■□□□□ 0.03
PTPN6-209ENST00000537533 ATRNL1Q5VV63 1379 aa15.24■□□□□ 0.03
PTPN6-209ENST00000537533 TRPA1O75762 1119 aa15.24■□□□□ 0.03
PTPN6-209ENST00000537533 IFIT2P09913 472 aaKnown RBP15.24■□□□□ 0.03
PTPN6-209ENST00000537533 GJA5P36382 358 aa15.24■□□□□ 0.03
PTPN6-209ENST00000537533 MAP3K10Q02779 954 aa15.24■□□□□ 0.03
PTPN6-209ENST00000537533 LRRCC1Q9C099 1032 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms