RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	TMEM39B	Q9GZU3	492 aa		13.34	□□□□□ -0.27
LDHA-215	ENST00000537296	BCL11A	Q9H165	835 aa		13.34	□□□□□ -0.27
LDHA-215	ENST00000537296	MAST3	O60307	1309 aa		13.33	□□□□□ -0.28
LDHA-215	ENST00000537296	PDS5A	Q29RF7	1337 aa	Known RBP	13.33	□□□□□ -0.28
LDHA-215	ENST00000537296	ECE1	P42892	770 aa		13.33	□□□□□ -0.28
LDHA-215	ENST00000537296	FXR2	P51116	673 aa	Known RBP eCLIP	13.33	□□□□□ -0.28	2e-27	■■□□□ 12
LDHA-215	ENST00000537296	ZNF157	P51786	506 aa	Predicted RBP	13.33	□□□□□ -0.28
LDHA-215	ENST00000537296	TTLL12	Q14166	644 aa	Predicted RBP	13.33	□□□□□ -0.28
LDHA-215	ENST00000537296	RHPN1	Q8TCX5	695 aa		13.33	□□□□□ -0.28
LDHA-215	ENST00000537296	TEPSIN	Q96N21	525 aa		13.33	□□□□□ -0.28
LDHA-215	ENST00000537296	MRI	Q9BWK5	157 aa		13.33	□□□□□ -0.28
LDHA-215	ENST00000537296	NDUFB9	Q9Y6M9	179 aa		13.33	□□□□□ -0.28
LDHA-215	ENST00000537296	FOXN1	O15353	648 aa		13.32	□□□□□ -0.28
LDHA-215	ENST00000537296	TTC39A	Q5SRH9	613 aa		13.32	□□□□□ -0.28
LDHA-215	ENST00000537296	CDC42EP5	Q6NZY7	148 aa		13.32	□□□□□ -0.28
LDHA-215	ENST00000537296	AACS	Q86V21	672 aa		13.32	□□□□□ -0.28
LDHA-215	ENST00000537296	WBP1L	Q9NX94	342 aa		13.32	□□□□□ -0.28
LDHA-215	ENST00000537296	AK9	Q5TCS8	1911 aa		13.31	□□□□□ -0.28
LDHA-215	ENST00000537296	HMMR	O75330	724 aa		13.31	□□□□□ -0.28
LDHA-215	ENST00000537296	UQCRFS1P1	P0C7P4	283 aa		13.31	□□□□□ -0.28
LDHA-215	ENST00000537296	NF2	P35240	595 aa		13.31	□□□□□ -0.28
LDHA-215	ENST00000537296	FKBP1B	P68106	108 aa		13.31	□□□□□ -0.28
LDHA-215	ENST00000537296	MECOM	Q03112	1051 aa		13.31	□□□□□ -0.28
LDHA-215	ENST00000537296	NFIA	Q12857	509 aa		13.31	□□□□□ -0.28
LDHA-215	ENST00000537296	DZIP1	Q86YF9	867 aa	Known RBP	13.31	□□□□□ -0.28
LDHA-215	ENST00000537296	RASAL3	Q86YV0	1011 aa		13.31	□□□□□ -0.28
LDHA-215	ENST00000537296	CRBN	Q96SW2	442 aa		13.31	□□□□□ -0.28
LDHA-215	ENST00000537296	ANGEL1	Q9UNK9	670 aa	Known RBP	13.31	□□□□□ -0.28
LDHA-215	ENST00000537296	PPP2R3B	Q9Y5P8	575 aa		13.31	□□□□□ -0.28
LDHA-215	ENST00000537296	MAST2	Q6P0Q8	1798 aa		13.31	□□□□□ -0.28
LDHA-215	ENST00000537296	SLC10A3	P09131	477 aa		13.3	□□□□□ -0.28
LDHA-215	ENST00000537296	ZAP70	P43403	619 aa		13.3	□□□□□ -0.28
LDHA-215	ENST00000537296	CCDC158	Q5M9N0	1113 aa		13.3	□□□□□ -0.28
LDHA-215	ENST00000537296	ERC1	Q8IUD2	1116 aa		13.3	□□□□□ -0.28
LDHA-215	ENST00000537296	ZGPAT	Q8N5A5	531 aa	Known RBP	13.3	□□□□□ -0.28
LDHA-215	ENST00000537296	CHMP4B	Q9H444	224 aa	Known RBP	13.3	□□□□□ -0.28
LDHA-215	ENST00000537296	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.3	□□□□□ -0.28
LDHA-215	ENST00000537296	PCDHB15	Q9Y5E8	787 aa		13.3	□□□□□ -0.28
LDHA-215	ENST00000537296	GAK	O14976	1311 aa		13.3	□□□□□ -0.28
LDHA-215	ENST00000537296	CYP2E1	P05181	493 aa	Predicted RBP	13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	TCP10	Q12799	353 aa		13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	MKRN3	Q13064	507 aa	Known RBP	13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	TNFAIP1	Q13829	316 aa		13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	HSP90AB4P	Q58FF6	505 aa		13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	ERICH6	Q7L0X2	663 aa		13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	NSUN4	Q96CB9	384 aa	Known RBP	13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	CLMN	Q96JQ2	1002 aa		13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	PIH1D3	Q9NQM4	214 aa	Known RBP	13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	USP40	Q9NVE5	1235 aa		13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	TSKS	Q9UJT2	592 aa		13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	DOCK2	Q92608	1830 aa		13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	CDK5RAP2	Q96SN8	1893 aa		13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	SMARCA5	O60264	1052 aa	Predicted RBP	13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	USP2	O75604	605 aa	Predicted RBP	13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	PRKAR2A	P13861	404 aa	Known RBP	13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	MAP2K2	P36507	400 aa		13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	MNX1	P50219	401 aa	Predicted RBP	13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	KIF23	Q02241	960 aa	Predicted RBP	13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	NOG	Q13253	232 aa		13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	LDLRAD1	Q5T700	205 aa		13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	ZFPM1	Q8IX07	1006 aa		13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	KIF1BP	Q96EK5	621 aa		13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	FAM198A	Q9UFP1	575 aa		13.29	□□□□□ -0.28
LDHA-215	ENST00000537296	MROH7-TTC4	A0A0A0MT08	1334 aa		13.28	□□□□□ -0.28
LDHA-215	ENST00000537296	BTD	P43251	543 aa		13.28	□□□□□ -0.28
LDHA-215	ENST00000537296	SUPT20HL1	Q3ZLR7	823 aa		13.28	□□□□□ -0.28
LDHA-215	ENST00000537296	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.28	□□□□□ -0.28
LDHA-215	ENST00000537296	ARMC9	Q7Z3E5	817 aa		13.28	□□□□□ -0.28
LDHA-215	ENST00000537296	CCDC102A	Q96A19	550 aa		13.28	□□□□□ -0.28
LDHA-215	ENST00000537296	ANTXR1	Q9H6X2	564 aa		13.28	□□□□□ -0.28
LDHA-215	ENST00000537296	TMOD2	Q9NZR1	351 aa		13.28	□□□□□ -0.28
LDHA-215	ENST00000537296	RAI14	Q9P0K7	980 aa		13.28	□□□□□ -0.28
LDHA-215	ENST00000537296	RFX7	Q2KHR2	1363 aa		13.27	□□□□□ -0.28
LDHA-215	ENST00000537296	PPP1R12B	O60237	982 aa	Predicted RBP	13.27	□□□□□ -0.29
LDHA-215	ENST00000537296	TNNI2	P48788	182 aa		13.27	□□□□□ -0.29
LDHA-215	ENST00000537296	MAP2K1	Q02750	393 aa	Predicted RBP	13.27	□□□□□ -0.29
LDHA-215	ENST00000537296	MAP3K11	Q16584	847 aa		13.27	□□□□□ -0.29
LDHA-215	ENST00000537296	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.27	□□□□□ -0.29
LDHA-215	ENST00000537296	ADGRA1	Q86SQ6	560 aa		13.27	□□□□□ -0.29
LDHA-215	ENST00000537296	FAM83A	Q86UY5	434 aa		13.27	□□□□□ -0.29
LDHA-215	ENST00000537296	CLASRP	Q8N2M8	674 aa	Known RBP	13.27	□□□□□ -0.29
LDHA-215	ENST00000537296	PIP4P2	Q8N4L2	257 aa		13.27	□□□□□ -0.29
LDHA-215	ENST00000537296	FAM163A	Q96GL9	167 aa	Predicted RBP	13.27	□□□□□ -0.29
LDHA-215	ENST00000537296	DDX4	Q9NQI0	724 aa	Known RBP	13.27	□□□□□ -0.29
LDHA-215	ENST00000537296	LRP2BP	Q9P2M1	347 aa		13.27	□□□□□ -0.29
LDHA-215	ENST00000537296	GPR75-ASB3	A0A0A6YYF3	556 aa		13.26	□□□□□ -0.29
LDHA-215	ENST00000537296	RAB11FIP3	O75154	756 aa		13.26	□□□□□ -0.29
LDHA-215	ENST00000537296	SLURP2	P0DP57	97 aa		13.26	□□□□□ -0.29
LDHA-215	ENST00000537296	RHBDL3	P58872	404 aa		13.26	□□□□□ -0.29
LDHA-215	ENST00000537296	FKBP1C	Q5VVH2	108 aa		13.26	□□□□□ -0.29
LDHA-215	ENST00000537296	CSRNP1	Q96S65	589 aa		13.26	□□□□□ -0.29
LDHA-215	ENST00000537296	LAMB1	P07942	1786 aa		13.25	□□□□□ -0.29
LDHA-215	ENST00000537296	WDHD1	O75717	1129 aa	Predicted RBP	13.25	□□□□□ -0.29
LDHA-215	ENST00000537296	HSPA8	P11142	646 aa	Known RBP	13.25	□□□□□ -0.29
LDHA-215	ENST00000537296	RGS3	P49796	1198 aa		13.25	□□□□□ -0.29
LDHA-215	ENST00000537296	LBX1	P52954	281 aa		13.25	□□□□□ -0.29
LDHA-215	ENST00000537296	MIGA2	Q7L4E1	593 aa		13.25	□□□□□ -0.29
LDHA-215	ENST00000537296	SH3BP5L	Q7L8J4	393 aa		13.25	□□□□□ -0.29
LDHA-215	ENST00000537296	FAM151A	Q8WW52	585 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms