RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 SAGE1Q9NXZ1 904 aa22■■□□□ 1.11
TNFRSF1A-209ENST00000536717 ABCF2Q9UG63 623 aa22■■□□□ 1.11
TNFRSF1A-209ENST00000536717 SUPT16HQ9Y5B9 1047 aaKnown RBP22■■□□□ 1.11
TNFRSF1A-209ENST00000536717 IREB2P48200 963 aaKnown RBP21.99■■□□□ 1.11
TNFRSF1A-209ENST00000536717 CDC42EP5Q6NZY7 148 aa21.99■■□□□ 1.11
TNFRSF1A-209ENST00000536717 UNCXA6NJT0 531 aa21.98■■□□□ 1.11
TNFRSF1A-209ENST00000536717 TRPA1O75762 1119 aa21.98■■□□□ 1.11
TNFRSF1A-209ENST00000536717 MCAMP43121 646 aa21.98■■□□□ 1.11
TNFRSF1A-209ENST00000536717 SPRYD7Q5W111 196 aa21.98■■□□□ 1.11
TNFRSF1A-209ENST00000536717 SPATA5Q8NB90 893 aa21.98■■□□□ 1.11
TNFRSF1A-209ENST00000536717 DBNDD2Q9BQY9 259 aa21.98■■□□□ 1.11
TNFRSF1A-209ENST00000536717 ZBTB40Q9NUA8 1239 aa21.98■■□□□ 1.11
TNFRSF1A-209ENST00000536717 GAKO14976 1311 aa21.98■■□□□ 1.11
TNFRSF1A-209ENST00000536717 SLC10A4Q96EP9 437 aa21.97■■□□□ 1.11
TNFRSF1A-209ENST00000536717 RPAP1Q9BWH6 1393 aaPredicted RBP21.97■■□□□ 1.11
TNFRSF1A-209ENST00000536717 TM4SF4P48230 202 aa21.96■■□□□ 1.11
TNFRSF1A-209ENST00000536717 C20orf194Q5TEA3 1177 aa21.96■■□□□ 1.11
TNFRSF1A-209ENST00000536717 DZIP1Q86YF9 867 aaKnown RBP21.96■■□□□ 1.11
TNFRSF1A-209ENST00000536717 ANKRD13AQ8IZ07 590 aa21.96■■□□□ 1.11
TNFRSF1A-209ENST00000536717 ZNF384Q8TF68 577 aa21.96■■□□□ 1.11
TNFRSF1A-209ENST00000536717 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.96■■□□□ 1.11
TNFRSF1A-209ENST00000536717 EXOC6BQ9Y2D4 811 aa21.96■■□□□ 1.11
TNFRSF1A-209ENST00000536717 DOCK2Q92608 1830 aa21.96■■□□□ 1.11
TNFRSF1A-209ENST00000536717 UQCRFS1P1P0C7P4 283 aa21.96■■□□□ 1.11
TNFRSF1A-209ENST00000536717 NFIAQ12857 509 aa21.96■■□□□ 1.11
TNFRSF1A-209ENST00000536717 SPTY2D1Q68D10 685 aaPredicted RBP21.96■■□□□ 1.11
TNFRSF1A-209ENST00000536717 TBC1D9Q6ZT07 1266 aa21.96■■□□□ 1.11
TNFRSF1A-209ENST00000536717 ERICH6Q7L0X2 663 aa21.96■■□□□ 1.11
TNFRSF1A-209ENST00000536717 WNK4Q96J92 1243 aa21.96■■□□□ 1.11
TNFRSF1A-209ENST00000536717 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.95■■□□□ 1.1
TNFRSF1A-209ENST00000536717 SIRT2Q8IXJ6 389 aa21.95■■□□□ 1.1
TNFRSF1A-209ENST00000536717 EAF2Q96CJ1 260 aaPredicted RBP21.95■■□□□ 1.1
TNFRSF1A-209ENST00000536717 FAM163AQ96GL9 167 aaPredicted RBP21.95■■□□□ 1.1
TNFRSF1A-209ENST00000536717 USP40Q9NVE5 1235 aa21.95■■□□□ 1.1
TNFRSF1A-209ENST00000536717 FAM198AQ9UFP1 575 aa21.95■■□□□ 1.1
TNFRSF1A-209ENST00000536717 DBNLQ9UJU6 430 aaKnown RBP21.95■■□□□ 1.1
TNFRSF1A-209ENST00000536717 MAST2Q6P0Q8 1798 aa21.94■■□□□ 1.1
TNFRSF1A-209ENST00000536717 ZBTB48P10074 688 aaPredicted RBP21.94■■□□□ 1.1
TNFRSF1A-209ENST00000536717 GJA5P36382 358 aa21.94■■□□□ 1.1
TNFRSF1A-209ENST00000536717 MECOMQ03112 1051 aa21.94■■□□□ 1.1
TNFRSF1A-209ENST00000536717 RPAP2Q8IXW5 612 aaPredicted RBP21.94■■□□□ 1.1
TNFRSF1A-209ENST00000536717 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.94■■□□□ 1.13e-7■■■■□ 25.5
TNFRSF1A-209ENST00000536717 FAM151AQ8WW52 585 aa21.94■■□□□ 1.1
TNFRSF1A-209ENST00000536717 TLR7Q9NYK1 1049 aaKnown RBP21.94■■□□□ 1.1
TNFRSF1A-209ENST00000536717 TCP10Q12799 353 aa21.93■■□□□ 1.1
TNFRSF1A-209ENST00000536717 CCDC158Q5M9N0 1113 aa21.93■■□□□ 1.1
TNFRSF1A-209ENST00000536717 TTC39AQ5SRH9 613 aa21.93■■□□□ 1.1
TNFRSF1A-209ENST00000536717 CCDC8Q9H0W5 538 aaPredicted RBP21.93■■□□□ 1.1
TNFRSF1A-209ENST00000536717 CDK5RAP2Q96SN8 1893 aa21.93■■□□□ 1.1
TNFRSF1A-209ENST00000536717 RFX7Q2KHR2 1363 aa21.92■■□□□ 1.1
TNFRSF1A-209ENST00000536717 MROH7-TTC4A0A0A0MT08 1334 aa21.92■■□□□ 1.1
TNFRSF1A-209ENST00000536717 SREBF2Q12772 1141 aa21.92■■□□□ 1.1
TNFRSF1A-209ENST00000536717 SLF2Q8IX21 1173 aa21.92■■□□□ 1.1
TNFRSF1A-209ENST00000536717 NSUN4Q96CB9 384 aaKnown RBP21.92■■□□□ 1.1
TNFRSF1A-209ENST00000536717 BTDP43251 543 aa21.91■■□□□ 1.1
TNFRSF1A-209ENST00000536717 MAP3K9P80192 1104 aa21.91■■□□□ 1.1
TNFRSF1A-209ENST00000536717 VGLL4Q14135 290 aa21.91■■□□□ 1.1
TNFRSF1A-209ENST00000536717 ZNF512BQ96KM6 892 aaPredicted RBP21.91■■□□□ 1.1
TNFRSF1A-209ENST00000536717 IDI2Q9BXS1 227 aa21.91■■□□□ 1.1
TNFRSF1A-209ENST00000536717 ELP3Q9H9T3 547 aa21.91■■□□□ 1.1
TNFRSF1A-209ENST00000536717 SNRKQ9NRH2 765 aa21.91■■□□□ 1.1
TNFRSF1A-209ENST00000536717 ERC1Q8IUD2 1116 aa21.9■■□□□ 1.1
TNFRSF1A-209ENST00000536717 ZFPM1Q8IX07 1006 aa21.9■■□□□ 1.1
TNFRSF1A-209ENST00000536717 CHMP4BQ9H444 224 aaKnown RBP21.9■■□□□ 1.1
TNFRSF1A-209ENST00000536717 GPR75-ASB3A0A0A6YYF3 556 aa21.9■■□□□ 1.1
TNFRSF1A-209ENST00000536717 MANSC4A6NHS7 340 aaPredicted RBP21.9■■□□□ 1.1
TNFRSF1A-209ENST00000536717 OPTNQ96CV9 577 aa21.9■■□□□ 1.1
TNFRSF1A-209ENST00000536717 HOOK2Q96ED9 719 aa21.9■■□□□ 1.1
TNFRSF1A-209ENST00000536717 WDHD1O75717 1129 aaPredicted RBP21.89■■□□□ 1.09
TNFRSF1A-209ENST00000536717 CYP2E1P05181 493 aaPredicted RBP21.89■■□□□ 1.09
TNFRSF1A-209ENST00000536717 RGS3P49796 1198 aa21.89■■□□□ 1.09
TNFRSF1A-209ENST00000536717 HSP90AB4PQ58FF6 505 aa21.89■■□□□ 1.09
TNFRSF1A-209ENST00000536717 MIGA2Q7L4E1 593 aa21.89■■□□□ 1.09
TNFRSF1A-209ENST00000536717 RHPN1Q8TCX5 695 aa21.89■■□□□ 1.09
TNFRSF1A-209ENST00000536717 CNKSR2Q8WXI2 1034 aa21.89■■□□□ 1.09
TNFRSF1A-209ENST00000536717 WRNIP1Q96S55 665 aa21.89■■□□□ 1.09
TNFRSF1A-209ENST00000536717 RAI14Q9P0K7 980 aa21.89■■□□□ 1.09
TNFRSF1A-209ENST00000536717 FOCADQ5VW36 1801 aa21.88■■□□□ 1.09
TNFRSF1A-209ENST00000536717 HMMRO75330 724 aa21.88■■□□□ 1.09
TNFRSF1A-209ENST00000536717 RHBDL3P58872 404 aa21.88■■□□□ 1.09
TNFRSF1A-209ENST00000536717 DCAF15Q66K64 600 aa21.88■■□□□ 1.09
TNFRSF1A-209ENST00000536717 IL1RAPL2Q9NP60 686 aa21.88■■□□□ 1.09
TNFRSF1A-209ENST00000536717 DDX4Q9NQI0 724 aaKnown RBP21.88■■□□□ 1.09
TNFRSF1A-209ENST00000536717 LRP2BPQ9P2M1 347 aa21.88■■□□□ 1.09
TNFRSF1A-209ENST00000536717 CSADQ9Y600 493 aa21.88■■□□□ 1.09
TNFRSF1A-209ENST00000536717 ENTPD3O75355 529 aa21.87■■□□□ 1.09
TNFRSF1A-209ENST00000536717 CAPN15O75808 1086 aa21.87■■□□□ 1.09
TNFRSF1A-209ENST00000536717 TBC1D8O95759 1140 aa21.87■■□□□ 1.09
TNFRSF1A-209ENST00000536717 ZAP70P43403 619 aa21.87■■□□□ 1.09
TNFRSF1A-209ENST00000536717 INHBEP58166 350 aa21.87■■□□□ 1.09
TNFRSF1A-209ENST00000536717 AACSQ86V21 672 aa21.87■■□□□ 1.09
TNFRSF1A-209ENST00000536717 ZKSCAN4Q969J2 545 aaPredicted RBP21.87■■□□□ 1.09
TNFRSF1A-209ENST00000536717 SNCAIPQ9Y6H5 919 aa21.87■■□□□ 1.09
TNFRSF1A-209ENST00000536717 IGF2BP3O00425 579 aaKnown RBP eCLIP21.86■■□□□ 1.092e-6■■■□□ 18.3
TNFRSF1A-209ENST00000536717 LDHCP07864 332 aa21.86■■□□□ 1.09
TNFRSF1A-209ENST00000536717 GSTO1P78417 241 aa21.86■■□□□ 1.09
TNFRSF1A-209ENST00000536717 IFNL1Q8IU54 200 aa21.86■■□□□ 1.09
TNFRSF1A-209ENST00000536717 CFHR5Q9BXR6 569 aa21.86■■□□□ 1.09
TNFRSF1A-209ENST00000536717 ZNF341Q9BYN7 854 aa21.86■■□□□ 1.09
TNFRSF1A-209ENST00000536717 ATRNL1Q5VV63 1379 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms