RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 TCP10Q12799 353 aa17.55■□□□□ 0.4
UBE3B-206ENST00000536398 NFIAQ12857 509 aa17.55■□□□□ 0.4
UBE3B-206ENST00000536398 TTC39AQ5SRH9 613 aa17.55■□□□□ 0.4
UBE3B-206ENST00000536398 DZIP1Q86YF9 867 aaKnown RBP17.55■□□□□ 0.4
UBE3B-206ENST00000536398 RPAP2Q8IXW5 612 aaPredicted RBP17.55■□□□□ 0.4
UBE3B-206ENST00000536398 ZGPATQ8N5A5 531 aaKnown RBP17.55■□□□□ 0.4
UBE3B-206ENST00000536398 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.55■□□□□ 0.4
UBE3B-206ENST00000536398 TMOD2Q9NZR1 351 aa17.55■□□□□ 0.4
UBE3B-206ENST00000536398 APBB1O00213 710 aa17.54■□□□□ 0.4
UBE3B-206ENST00000536398 UQCRFS1P1P0C7P4 283 aa17.54■□□□□ 0.4
UBE3B-206ENST00000536398 ERICH6Q7L0X2 663 aa17.54■□□□□ 0.4
UBE3B-206ENST00000536398 ZFPM1Q8IX07 1006 aa17.54■□□□□ 0.4
UBE3B-206ENST00000536398 TNS4Q8IZW8 715 aa17.54■□□□□ 0.4
UBE3B-206ENST00000536398 SLC10A4Q96EP9 437 aa17.54■□□□□ 0.4
UBE3B-206ENST00000536398 IL1RAPL2Q9NP60 686 aa17.54■□□□□ 0.4
UBE3B-206ENST00000536398 RNF186Q9NXI6 227 aa17.54■□□□□ 0.4
UBE3B-206ENST00000536398 GAKO14976 1311 aa17.53■□□□□ 0.4
UBE3B-206ENST00000536398 TRPA1O75762 1119 aa17.53■□□□□ 0.4
UBE3B-206ENST00000536398 IREB2P48200 963 aaKnown RBP17.53■□□□□ 0.4
UBE3B-206ENST00000536398 CCDC158Q5M9N0 1113 aa17.53■□□□□ 0.4
UBE3B-206ENST00000536398 FKBP1CQ5VVH2 108 aa17.53■□□□□ 0.4
UBE3B-206ENST00000536398 SPRYD7Q5W111 196 aa17.53■□□□□ 0.4
UBE3B-206ENST00000536398 SPTY2D1Q68D10 685 aaPredicted RBP17.53■□□□□ 0.4
UBE3B-206ENST00000536398 FAM83AQ86UY5 434 aa17.53■□□□□ 0.4
UBE3B-206ENST00000536398 FAM198AQ9UFP1 575 aa17.53■□□□□ 0.4
UBE3B-206ENST00000536398 GJA5P36382 358 aa17.52■□□□□ 0.4
UBE3B-206ENST00000536398 IFFO2Q5TF58 517 aa17.52■□□□□ 0.4
UBE3B-206ENST00000536398 RHPN1Q8TCX5 695 aa17.52■□□□□ 0.4
UBE3B-206ENST00000536398 NSUN4Q96CB9 384 aaKnown RBP17.52■□□□□ 0.4
UBE3B-206ENST00000536398 WNK4Q96J92 1243 aa17.52■□□□□ 0.4
UBE3B-206ENST00000536398 BCL11AQ9H165 835 aa17.52■□□□□ 0.4
UBE3B-206ENST00000536398 CA12O43570 354 aa17.51■□□□□ 0.39
UBE3B-206ENST00000536398 CYP2E1P05181 493 aaPredicted RBP17.51■□□□□ 0.39
UBE3B-206ENST00000536398 BTDP43251 543 aa17.51■□□□□ 0.39
UBE3B-206ENST00000536398 ZAP70P43403 619 aa17.51■□□□□ 0.39
UBE3B-206ENST00000536398 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.51■□□□□ 0.39
UBE3B-206ENST00000536398 MIGA2Q7L4E1 593 aa17.51■□□□□ 0.39
UBE3B-206ENST00000536398 AACSQ86V21 672 aa17.51■□□□□ 0.39
UBE3B-206ENST00000536398 ERC1Q8IUD2 1116 aa17.51■□□□□ 0.39
UBE3B-206ENST00000536398 FAM151AQ8WW52 585 aa17.51■□□□□ 0.39
UBE3B-206ENST00000536398 FAM163AQ96GL9 167 aaPredicted RBP17.51■□□□□ 0.39
UBE3B-206ENST00000536398 ELP3Q9H9T3 547 aa17.51■□□□□ 0.39
UBE3B-206ENST00000536398 RAI14Q9P0K7 980 aa17.51■□□□□ 0.39
UBE3B-206ENST00000536398 NDUFB9Q9Y6M9 179 aa17.51■□□□□ 0.39
UBE3B-206ENST00000536398 MROH7-TTC4A0A0A0MT08 1334 aa17.5■□□□□ 0.39
UBE3B-206ENST00000536398 HMMRO75330 724 aa17.5■□□□□ 0.39
UBE3B-206ENST00000536398 TM4SF4P48230 202 aa17.5■□□□□ 0.39
UBE3B-206ENST00000536398 ANKRD13AQ8IZ07 590 aa17.5■□□□□ 0.39
UBE3B-206ENST00000536398 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.5■□□□□ 0.39
UBE3B-206ENST00000536398 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
UBE3B-206ENST00000536398 ZNF512BQ96KM6 892 aaPredicted RBP17.5■□□□□ 0.39
UBE3B-206ENST00000536398 PIH1D3Q9NQM4 214 aaKnown RBP17.5■□□□□ 0.39
UBE3B-206ENST00000536398 LRP2BPQ9P2M1 347 aa17.5■□□□□ 0.39
UBE3B-206ENST00000536398 GPR75-ASB3A0A0A6YYF3 556 aa17.49■□□□□ 0.39
UBE3B-206ENST00000536398 RGS3P49796 1198 aa17.49■□□□□ 0.39
UBE3B-206ENST00000536398 RHBDL3P58872 404 aa17.49■□□□□ 0.39
UBE3B-206ENST00000536398 MAP3K9P80192 1104 aa17.49■□□□□ 0.39
UBE3B-206ENST00000536398 VGLL4Q14135 290 aa17.49■□□□□ 0.39
UBE3B-206ENST00000536398 HSP90AB4PQ58FF6 505 aa17.49■□□□□ 0.39
UBE3B-206ENST00000536398 SLF2Q8IX21 1173 aa17.49■□□□□ 0.39
UBE3B-206ENST00000536398 CHMP4BQ9H444 224 aaKnown RBP17.49■□□□□ 0.39
UBE3B-206ENST00000536398 DDX4Q9NQI0 724 aaKnown RBP17.49■□□□□ 0.39
UBE3B-206ENST00000536398 MYH2Q9UKX2 1941 aa17.49■□□□□ 0.39
UBE3B-206ENST00000536398 WDHD1O75717 1129 aaPredicted RBP17.48■□□□□ 0.39
UBE3B-206ENST00000536398 SLURP2P0DP57 97 aa17.48■□□□□ 0.39
UBE3B-206ENST00000536398 RRP1P56182 461 aaKnown RBP17.48■□□□□ 0.39
UBE3B-206ENST00000536398 SH3BP5LQ7L8J4 393 aa17.48■□□□□ 0.39
UBE3B-206ENST00000536398 REM2Q8IYK8 340 aaPredicted RBP17.48■□□□□ 0.39
UBE3B-206ENST00000536398 ZKSCAN4Q969J2 545 aaPredicted RBP17.48■□□□□ 0.39
UBE3B-206ENST00000536398 IDI2Q9BXS1 227 aa17.48■□□□□ 0.39
UBE3B-206ENST00000536398 SAGE1Q9NXZ1 904 aa17.48■□□□□ 0.39
UBE3B-206ENST00000536398 UNCXA6NJT0 531 aa17.47■□□□□ 0.39
UBE3B-206ENST00000536398 TBC1D8O95759 1140 aa17.47■□□□□ 0.39
UBE3B-206ENST00000536398 PICALMQ13492 652 aa17.47■□□□□ 0.39
UBE3B-206ENST00000536398 ADGRA1Q86SQ6 560 aa17.47■□□□□ 0.39
UBE3B-206ENST00000536398 OPTNQ96CV9 577 aa17.47■□□□□ 0.39
UBE3B-206ENST00000536398 KIF1BPQ96EK5 621 aa17.47■□□□□ 0.39
UBE3B-206ENST00000536398 WRNIP1Q96S55 665 aa17.47■□□□□ 0.39
UBE3B-206ENST00000536398 ANTXR1Q9H6X2 564 aa17.47■□□□□ 0.39
UBE3B-206ENST00000536398 AKAP11Q9UKA4 1901 aa17.47■□□□□ 0.39
UBE3B-206ENST00000536398 RFX7Q2KHR2 1363 aa17.46■□□□□ 0.39
UBE3B-206ENST00000536398 RPAP1Q9BWH6 1393 aaPredicted RBP17.46■□□□□ 0.39
UBE3B-206ENST00000536398 DDTLA6NHG4 134 aaPredicted RBP17.46■□□□□ 0.39
UBE3B-206ENST00000536398 ZBTB48P10074 688 aaPredicted RBP17.46■□□□□ 0.39
UBE3B-206ENST00000536398 GSTO1P78417 241 aa17.46■□□□□ 0.39
UBE3B-206ENST00000536398 R3HDMLQ9H3Y0 253 aa17.46■□□□□ 0.39
UBE3B-206ENST00000536398 SNCAIPQ9Y6H5 919 aa17.46■□□□□ 0.39
UBE3B-206ENST00000536398 SMARCA5O60264 1052 aaPredicted RBP17.45■□□□□ 0.38
UBE3B-206ENST00000536398 RAB11FIP3O75154 756 aa17.45■□□□□ 0.38
UBE3B-206ENST00000536398 ENTPD3O75355 529 aa17.45■□□□□ 0.38
UBE3B-206ENST00000536398 LDHCP07864 332 aa17.45■□□□□ 0.38
UBE3B-206ENST00000536398 INPP5BP32019 993 aa17.45■□□□□ 0.38
UBE3B-206ENST00000536398 SREBF2Q12772 1141 aa17.45■□□□□ 0.38
UBE3B-206ENST00000536398 NAA16Q6N069 864 aaPredicted RBP17.45■□□□□ 0.38
UBE3B-206ENST00000536398 CLASRPQ8N2M8 674 aaKnown RBP17.45■□□□□ 0.38
UBE3B-206ENST00000536398 SH3RF3Q8TEJ3 882 aaPredicted RBP17.45■□□□□ 0.38
UBE3B-206ENST00000536398 ZNF341Q9BYN7 854 aa17.45■□□□□ 0.38
UBE3B-206ENST00000536398 CSADQ9Y600 493 aa17.45■□□□□ 0.38
UBE3B-206ENST00000536398 OTOFQ9HC10 1997 aa17.45■□□□□ 0.38
UBE3B-206ENST00000536398 CASP8AP2Q9UKL3 1982 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms