RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 TTC22Q5TAA0 569 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 THEMIS2Q5TEJ8 643 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 CCDC171Q6TFL3 1326 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 ARMCX6Q7L4S7 300 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 TTC6Q86TZ1 520 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 IQUBQ8NA54 791 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 ITFG2Q969R8 447 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 RNF166Q96A37 237 aaPredicted RBP4.3□□□□□ -1.72
MCF2-210ENST00000536274 IRX2Q9BZI1 471 aaPredicted RBP4.3□□□□□ -1.72
MCF2-210ENST00000536274 FAM117AQ9C073 453 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 TNMDQ9H2S6 317 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 FAM204AQ9H8W3 233 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 L2HGDHQ9H9P8 463 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 VEZTQ9HBM0 779 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 ARFGAP3Q9NP61 516 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 ANO2Q9NQ90 1003 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 ETAA1Q9NY74 926 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 PKD1L3Q7Z443 1732 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 A0A087WUV0 522 aaPredicted RBP4.3□□□□□ -1.72
MCF2-210ENST00000536274 A0A0U1RQJ8 604 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 IVLP07476 585 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 ZSCAN22P10073 491 aaPredicted RBP4.3□□□□□ -1.72
MCF2-210ENST00000536274 SSR1P43307 286 aaKnown RBP4.3□□□□□ -1.72
MCF2-210ENST00000536274 FOSBP53539 338 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 APOBRQ0VD83 1088 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 NAA25Q14CX7 972 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 PPP1R15BQ5SWA1 713 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 MFSD4BQ5TF39 518 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 NFXL1Q6ZNB6 911 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 TRIM74Q86UV6 250 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 TRIM73Q86UV7 250 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 EFCAB13Q8IY85 973 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 MICAL1Q8TDZ2 1067 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 ATRIPQ8WXE1 791 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 MRFAP1L1Q96HT8 127 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 SLC4A5Q9BY07 1137 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 NUP62CLQ9H1M0 184 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 ODF2LQ9ULJ1 636 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 MRFAP1Q9Y605 127 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 FAM169AQ9Y6X4 670 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 NSD3Q9BZ95 1437 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 TTC21AQ8NDW8 1320 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 A0A1B0GVG6 124 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 WASLO00401 505 aaPredicted RBP4.3□□□□□ -1.72
MCF2-210ENST00000536274 RAD21O60216 631 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 ADAMTS2O95450 1211 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 NBPF7P0C2Y1 421 aaPredicted RBP4.3□□□□□ -1.72
MCF2-210ENST00000536274 RHOXF2BP0C7M4 288 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 GPTP24298 496 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 CLNS1AP54105 237 aaKnown RBP4.3□□□□□ -1.72
MCF2-210ENST00000536274 ZRSR1Q15695 479 aaKnown RBP4.3□□□□□ -1.72
MCF2-210ENST00000536274 FKBP15Q5T1M5 1219 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 AP1ARQ63HQ0 302 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 INTS3Q68E01 1043 aaKnown RBP4.3□□□□□ -1.72
MCF2-210ENST00000536274 ARMCX5Q6P1M9 558 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 OTUD6BQ8N6M0 293 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 NECAB1Q8N987 351 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 WDR24Q96S15 920 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 PNKPQ96T60 521 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 RHOXF2Q9BQY4 288 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 TRAIPQ9BWF2 469 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 TRIM6Q9C030 488 aaPredicted RBP4.3□□□□□ -1.72
MCF2-210ENST00000536274 MCM8Q9UJA3 840 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 MTMR7Q9Y216 660 aa4.3□□□□□ -1.72
MCF2-210ENST00000536274 USP6P35125 1406 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 NSD2O96028 1365 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 LTN1O94822 1766 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 WDR33Q9C0J8 1336 aaKnown RBP4.29□□□□□ -1.72
MCF2-210ENST00000536274 TTC36A6NLP5 189 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 KIF2AO00139 706 aaPredicted RBP4.29□□□□□ -1.72
MCF2-210ENST00000536274 STX6O43752 255 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 F13A1P00488 732 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 NF2P35240 595 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 LSM11P83369 360 aaKnown RBP eCLIP4.29□□□□□ -1.72
MCF2-210ENST00000536274 PDE4DQ08499 809 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 TBC1D25Q3MII6 688 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 HSP90AA4PQ58FG1 418 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 TMC6Q7Z403 805 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 CCDC83Q8IWF9 413 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 C3orf20Q8ND61 904 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 TBC1D22AQ8WUA7 517 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 THUMPD2Q9BTF0 503 aaKnown RBP4.29□□□□□ -1.72
MCF2-210ENST00000536274 CARD14Q9BXL6 1004 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 ZNF232Q9UNY5 417 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 KIF24Q5T7B8 1368 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 C5P01031 1676 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 ERC2O15083 957 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 ZBTB7BO15156 539 aaPredicted RBP4.29□□□□□ -1.72
MCF2-210ENST00000536274 KCNQ2O43526 872 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 CPP00450 1065 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 TMEM62Q0P6H9 643 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 SF3A3Q12874 501 aaKnown RBP eCLIP4.29□□□□□ -1.72
MCF2-210ENST00000536274 WDR63Q8IWG1 891 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 TEX11Q8IYF3 940 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 SLC16A10Q8TF71 515 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 RILPL2Q969X0 211 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 CRISPLD2Q9H0B8 497 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 ABCB6Q9NP58 842 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 PARP3Q9Y6F1 533 aa4.29□□□□□ -1.72
MCF2-210ENST00000536274 KIAA0232Q92628 1395 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms