RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 APOBEC3HQ6NTF7 200 aaKnown RBP13.89□□□□□ -0.19
LMO3-213ENST00000536172 MRPL50Q8N5N7 158 aaKnown RBP13.89□□□□□ -0.19
LMO3-213ENST00000536172 ZNF341Q9BYN7 854 aa13.89□□□□□ -0.19
LMO3-213ENST00000536172 FBXO3Q9UK99 471 aa13.89□□□□□ -0.19
LMO3-213ENST00000536172 SNCAIPQ9Y6H5 919 aa13.89□□□□□ -0.19
LMO3-213ENST00000536172 MKI67P46013 3256 aaKnown RBP13.89□□□□□ -0.19
LMO3-213ENST00000536172 IRF6O14896 467 aa13.88□□□□□ -0.19
LMO3-213ENST00000536172 EN2P19622 333 aaPredicted RBP13.88□□□□□ -0.19
LMO3-213ENST00000536172 FGFR2P21802 821 aa13.88□□□□□ -0.19
LMO3-213ENST00000536172 LACTBP83111 547 aaPredicted RBP13.88□□□□□ -0.19
LMO3-213ENST00000536172 HABP4Q5JVS0 413 aaKnown RBP13.88□□□□□ -0.19
LMO3-213ENST00000536172 LPIN2Q92539 896 aa13.88□□□□□ -0.19
LMO3-213ENST00000536172 USP44Q9H0E7 712 aa13.88□□□□□ -0.19
LMO3-213ENST00000536172 PTCH2Q9Y6C5 1203 aa13.88□□□□□ -0.19
LMO3-213ENST00000536172 BTBD19C9JJ37 291 aa13.87□□□□□ -0.19
LMO3-213ENST00000536172 E9PSI1 815 aa13.87□□□□□ -0.19
LMO3-213ENST00000536172 EYA2O00167 538 aa13.87□□□□□ -0.19
LMO3-213ENST00000536172 CACNB3P54284 484 aa13.87□□□□□ -0.19
LMO3-213ENST00000536172 SLC4A8Q2Y0W8 1093 aa13.87□□□□□ -0.19
LMO3-213ENST00000536172 FAM151AQ8WW52 585 aa13.87□□□□□ -0.19
LMO3-213ENST00000536172 ZKSCAN4Q969J2 545 aaPredicted RBP13.87□□□□□ -0.19
LMO3-213ENST00000536172 GNL3LQ9NVN8 582 aaKnown RBP13.87□□□□□ -0.19
LMO3-213ENST00000536172 HDAC5Q9UQL6 1122 aa13.87□□□□□ -0.19
LMO3-213ENST00000536172 HOXD10P28358 340 aa13.86□□□□□ -0.19
LMO3-213ENST00000536172 CAP1Q01518 475 aa13.86□□□□□ -0.19
LMO3-213ENST00000536172 ALDH1L2Q3SY69 923 aa13.86□□□□□ -0.19
LMO3-213ENST00000536172 ANKRD23Q86SG2 305 aa13.86□□□□□ -0.19
LMO3-213ENST00000536172 MIER1Q8N108 512 aa13.86□□□□□ -0.19
LMO3-213ENST00000536172 SEMA3EO15041 775 aa13.85□□□□□ -0.19
LMO3-213ENST00000536172 KLHDC4Q8TBB5 520 aa13.85□□□□□ -0.19
LMO3-213ENST00000536172 ZNF112Q9UJU3 913 aa13.85□□□□□ -0.19
LMO3-213ENST00000536172 MYH2Q9UKX2 1941 aa13.84□□□□□ -0.19
LMO3-213ENST00000536172 CIAO1O76071 339 aa13.84□□□□□ -0.19
LMO3-213ENST00000536172 NOL9Q5SY16 702 aaKnown RBP13.84□□□□□ -0.19
LMO3-213ENST00000536172 C17orf99Q6UX52 265 aa13.84□□□□□ -0.19
LMO3-213ENST00000536172 ZGPATQ8N5A5 531 aaKnown RBP13.84□□□□□ -0.19
LMO3-213ENST00000536172 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.84□□□□□ -0.19
LMO3-213ENST00000536172 SSH1Q8WYL5 1049 aa13.84□□□□□ -0.19
LMO3-213ENST00000536172 KCNH4Q9UQ05 1017 aa13.84□□□□□ -0.19
LMO3-213ENST00000536172 SALL1Q9NSC2 1324 aa13.84□□□□□ -0.19
LMO3-213ENST00000536172 BRCA2P51587 3418 aa13.84□□□□□ -0.19
LMO3-213ENST00000536172 DOCK2Q92608 1830 aa13.83□□□□□ -0.2
LMO3-213ENST00000536172 MGAMO43451 1857 aa13.83□□□□□ -0.2
LMO3-213ENST00000536172 LDHBP07195 334 aaKnown RBP13.83□□□□□ -0.2
LMO3-213ENST00000536172 RFX5P48382 616 aaPredicted RBP13.83□□□□□ -0.2
LMO3-213ENST00000536172 CDC42EP5Q6NZY7 148 aa13.83□□□□□ -0.2
LMO3-213ENST00000536172 MIGA2Q7L4E1 593 aa13.83□□□□□ -0.2
LMO3-213ENST00000536172 NKX2-3Q8TAU0 364 aa13.83□□□□□ -0.2
LMO3-213ENST00000536172 FOXD4L1Q9NU39 408 aa13.83□□□□□ -0.2
LMO3-213ENST00000536172 CEP126Q9P2H0 1117 aa13.83□□□□□ -0.2
LMO3-213ENST00000536172 DENND2AQ9ULE3 1009 aa13.83□□□□□ -0.2
LMO3-213ENST00000536172 DAGLAQ9Y4D2 1042 aa13.83□□□□□ -0.2
LMO3-213ENST00000536172 ZSWIM8A7E2V4 1837 aa13.83□□□□□ -0.2
LMO3-213ENST00000536172 PDHXO00330 501 aa13.82□□□□□ -0.2
LMO3-213ENST00000536172 CXCL11O14625 94 aa13.82□□□□□ -0.2
LMO3-213ENST00000536172 CT47B1P0C2W7 299 aaPredicted RBP13.82□□□□□ -0.2
LMO3-213ENST00000536172 UBTFL1P0CB47 393 aaPredicted RBP13.82□□□□□ -0.2
LMO3-213ENST00000536172 INPP5BP32019 993 aa13.82□□□□□ -0.2
LMO3-213ENST00000536172 ATP2B3Q16720 1220 aa13.82□□□□□ -0.2
LMO3-213ENST00000536172 ATG9AQ7Z3C6 839 aa13.82□□□□□ -0.2
LMO3-213ENST00000536172 SLF2Q8IX21 1173 aa13.82□□□□□ -0.2
LMO3-213ENST00000536172 PARK7Q99497 189 aaKnown RBP13.82□□□□□ -0.2
LMO3-213ENST00000536172 ARHGAP39Q9C0H5 1083 aa13.82□□□□□ -0.2
LMO3-213ENST00000536172 SRRDQ9UH36 339 aa13.82□□□□□ -0.2
LMO3-213ENST00000536172 CAPN2P17655 700 aa13.81□□□□□ -0.2
LMO3-213ENST00000536172 IL15P40933 162 aaPredicted RBP13.81□□□□□ -0.2
LMO3-213ENST00000536172 PSMC4P43686 418 aa13.81□□□□□ -0.2
LMO3-213ENST00000536172 TCP10Q12799 353 aa13.81□□□□□ -0.2
LMO3-213ENST00000536172 FASTKD5Q7L8L6 764 aaKnown RBP13.81□□□□□ -0.2
LMO3-213ENST00000536172 SH3TC2Q8TF17 1288 aa13.81□□□□□ -0.2
LMO3-213ENST00000536172 ENTPD3O75355 529 aa13.8□□□□□ -0.2
LMO3-213ENST00000536172 FMNL1O95466 1100 aaPredicted RBP13.8□□□□□ -0.2
LMO3-213ENST00000536172 PRDX5P30044 214 aa13.8□□□□□ -0.2
LMO3-213ENST00000536172 SLFN5Q08AF3 891 aa13.8□□□□□ -0.2
LMO3-213ENST00000536172 DIXDC1Q155Q3 683 aa13.8□□□□□ -0.2
LMO3-213ENST00000536172 RAET1EQ8TD07 263 aa13.8□□□□□ -0.2
LMO3-213ENST00000536172 TRIM47Q96LD4 638 aa13.8□□□□□ -0.2
LMO3-213ENST00000536172 IDI2Q9BXS1 227 aa13.8□□□□□ -0.2
LMO3-213ENST00000536172 SMC4Q9NTJ3 1288 aa13.8□□□□□ -0.2
LMO3-213ENST00000536172 USP40Q9NVE5 1235 aa13.8□□□□□ -0.2
LMO3-213ENST00000536172 CPA4Q9UI42 421 aa13.8□□□□□ -0.2
LMO3-213ENST00000536172 PDS5AQ29RF7 1337 aaKnown RBP13.8□□□□□ -0.2
LMO3-213ENST00000536172 ADGRA2Q96PE1 1338 aa13.8□□□□□ -0.2
LMO3-213ENST00000536172 GRK4P32298 578 aa13.79□□□□□ -0.2
LMO3-213ENST00000536172 FCGRTP55899 365 aa13.79□□□□□ -0.2
LMO3-213ENST00000536172 NFIAQ12857 509 aa13.79□□□□□ -0.2
LMO3-213ENST00000536172 PICK1Q9NRD5 415 aa13.79□□□□□ -0.2
LMO3-213ENST00000536172 FAM198AQ9UFP1 575 aa13.79□□□□□ -0.2
LMO3-213ENST00000536172 SLC45A1Q9Y2W3 748 aa13.79□□□□□ -0.2
LMO3-213ENST00000536172 PTPRFP10586 1907 aa13.79□□□□□ -0.2
LMO3-213ENST00000536172 DOCK1Q14185 1865 aa13.78□□□□□ -0.2
LMO3-213ENST00000536172 OSBPP22059 807 aa13.78□□□□□ -0.2
LMO3-213ENST00000536172 FXR1P51114 621 aaKnown RBP eCLIP13.78□□□□□ -0.2
LMO3-213ENST00000536172 UBXN2AP68543 259 aa13.78□□□□□ -0.2
LMO3-213ENST00000536172 MAP3K10Q02779 954 aa13.78□□□□□ -0.2
LMO3-213ENST00000536172 MOGSQ13724 837 aa13.78□□□□□ -0.2
LMO3-213ENST00000536172 SPTY2D1Q68D10 685 aaPredicted RBP13.78□□□□□ -0.2
LMO3-213ENST00000536172 SCYL3Q8IZE3 742 aa13.78□□□□□ -0.2
LMO3-213ENST00000536172 FAM163AQ96GL9 167 aaPredicted RBP13.78□□□□□ -0.2
LMO3-213ENST00000536172 API5Q9BZZ5 524 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms