RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 ZCCHC17Q9NP64 241 aaKnown RBP16.39■□□□□ 0.21
CLSTN3-205ENST00000535452 PPATQ06203 517 aa16.38■□□□□ 0.21
CLSTN3-205ENST00000535452 APOBEC3HQ6NTF7 200 aaKnown RBP16.38■□□□□ 0.21
CLSTN3-205ENST00000535452 FRAT1Q92837 279 aaPredicted RBP16.38■□□□□ 0.21
CLSTN3-205ENST00000535452 USP40Q9NVE5 1235 aa16.38■□□□□ 0.21
CLSTN3-205ENST00000535452 ABCF2Q9UG63 623 aa16.38■□□□□ 0.21
CLSTN3-205ENST00000535452 AOX1Q06278 1338 aa16.38■□□□□ 0.21
CLSTN3-205ENST00000535452 RFX5P48382 616 aaPredicted RBP16.37■□□□□ 0.21
CLSTN3-205ENST00000535452 TCP10Q12799 353 aa16.37■□□□□ 0.21
CLSTN3-205ENST00000535452 G3BP1Q13283 466 aaKnown RBP eCLIP16.37■□□□□ 0.21
CLSTN3-205ENST00000535452 PPIL2Q13356 520 aa16.37■□□□□ 0.21
CLSTN3-205ENST00000535452 GRIK5Q16478 980 aa16.37■□□□□ 0.21
CLSTN3-205ENST00000535452 PRPF38BQ5VTL8 546 aaKnown RBP16.37■□□□□ 0.21
CLSTN3-205ENST00000535452 MIGA2Q7L4E1 593 aa16.37■□□□□ 0.21
CLSTN3-205ENST00000535452 NEUROD6Q96NK8 337 aa16.37■□□□□ 0.21
CLSTN3-205ENST00000535452 R3HDMLQ9H3Y0 253 aa16.37■□□□□ 0.21
CLSTN3-205ENST00000535452 COPRSQ9NQ92 184 aa16.37■□□□□ 0.21
CLSTN3-205ENST00000535452 PICK1Q9NRD5 415 aa16.37■□□□□ 0.21
CLSTN3-205ENST00000535452 PTPN22Q9Y2R2 807 aa16.37■□□□□ 0.21
CLSTN3-205ENST00000535452 GNRH1P01148 92 aa16.36■□□□□ 0.21
CLSTN3-205ENST00000535452 GNAI2P04899 355 aa16.36■□□□□ 0.21
CLSTN3-205ENST00000535452 HOXD10P28358 340 aa16.36■□□□□ 0.21
CLSTN3-205ENST00000535452 GJA5P36382 358 aa16.36■□□□□ 0.21
CLSTN3-205ENST00000535452 GSTO1P78417 241 aa16.36■□□□□ 0.21
CLSTN3-205ENST00000535452 SLC9C1Q4G0N8 1177 aa16.36■□□□□ 0.21
CLSTN3-205ENST00000535452 ATG9AQ7Z3C6 839 aa16.36■□□□□ 0.21
CLSTN3-205ENST00000535452 DAGLAQ9Y4D2 1042 aa16.36■□□□□ 0.21
CLSTN3-205ENST00000535452 SALL1Q9NSC2 1324 aa16.36■□□□□ 0.21
CLSTN3-205ENST00000535452 LDHCP07864 332 aa16.35■□□□□ 0.21
CLSTN3-205ENST00000535452 RARSP54136 660 aaKnown RBP16.35■□□□□ 0.21
CLSTN3-205ENST00000535452 OS9Q13438 667 aaPredicted RBP16.35■□□□□ 0.21
CLSTN3-205ENST00000535452 DIXDC1Q155Q3 683 aa16.35■□□□□ 0.21
CLSTN3-205ENST00000535452 CCDC102BQ68D86 513 aa16.35■□□□□ 0.21
CLSTN3-205ENST00000535452 ERICH6Q7L0X2 663 aa16.35■□□□□ 0.21
CLSTN3-205ENST00000535452 TRMT2AQ8IZ69 625 aaKnown RBP16.35■□□□□ 0.21
CLSTN3-205ENST00000535452 BRI3BPQ8WY22 251 aa16.35■□□□□ 0.21
CLSTN3-205ENST00000535452 ZKSCAN4Q969J2 545 aaPredicted RBP16.35■□□□□ 0.21
CLSTN3-205ENST00000535452 GCC1Q96CN9 775 aa16.35■□□□□ 0.21
CLSTN3-205ENST00000535452 MS4A4AQ96JQ5 239 aa16.35■□□□□ 0.21
CLSTN3-205ENST00000535452 PRDX5P30044 214 aa16.34■□□□□ 0.21
CLSTN3-205ENST00000535452 PRMT2P55345 433 aa16.34■□□□□ 0.21
CLSTN3-205ENST00000535452 SLC4A8Q2Y0W8 1093 aa16.34■□□□□ 0.21
CLSTN3-205ENST00000535452 CDC42EP5Q6NZY7 148 aa16.34■□□□□ 0.21
CLSTN3-205ENST00000535452 CDAN1Q8IWY9 1227 aa16.34■□□□□ 0.21
CLSTN3-205ENST00000535452 FTSJ3Q8IY81 847 aaKnown RBP16.34■□□□□ 0.21
CLSTN3-205ENST00000535452 MEIS3Q99687 375 aa16.34■□□□□ 0.21
CLSTN3-205ENST00000535452 PTPN18Q99952 460 aa16.34■□□□□ 0.21
CLSTN3-205ENST00000535452 SNCAIPQ9Y6H5 919 aa16.34■□□□□ 0.21
CLSTN3-205ENST00000535452 MYH13Q9UKX3 1938 aa16.33■□□□□ 0.21
CLSTN3-205ENST00000535452 A0A1B0GUL7 405 aa16.33■□□□□ 0.2
CLSTN3-205ENST00000535452 IRF6O14896 467 aa16.33■□□□□ 0.2
CLSTN3-205ENST00000535452 TLR2O60603 784 aa16.33■□□□□ 0.2
CLSTN3-205ENST00000535452 PHKA1P46020 1223 aa16.33■□□□□ 0.2
CLSTN3-205ENST00000535452 CNKSR2Q8WXI2 1034 aa16.33■□□□□ 0.2
CLSTN3-205ENST00000535452 PARK7Q99497 189 aaKnown RBP16.33■□□□□ 0.2
CLSTN3-205ENST00000535452 PA2G4Q9UQ80 394 aaKnown RBP16.33■□□□□ 0.2
CLSTN3-205ENST00000535452 ENTPD3O75355 529 aa16.32■□□□□ 0.2
CLSTN3-205ENST00000535452 PDS5AQ29RF7 1337 aaKnown RBP16.32■□□□□ 0.2
CLSTN3-205ENST00000535452 ZKSCAN2Q63HK3 967 aa16.32■□□□□ 0.2
CLSTN3-205ENST00000535452 ATF7IPQ6VMQ6 1270 aa16.32■□□□□ 0.2
CLSTN3-205ENST00000535452 FASTKD5Q7L8L6 764 aaKnown RBP16.32■□□□□ 0.2
CLSTN3-205ENST00000535452 FAM43AQ8N2R8 423 aa16.32■□□□□ 0.2
CLSTN3-205ENST00000535452 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.32■□□□□ 0.2
CLSTN3-205ENST00000535452 TIMM10P62072 90 aa16.31■□□□□ 0.2
CLSTN3-205ENST00000535452 PICALMQ13492 652 aa16.31■□□□□ 0.2
CLSTN3-205ENST00000535452 ANKRD23Q86SG2 305 aa16.31■□□□□ 0.2
CLSTN3-205ENST00000535452 XAGE2Q96GT9 111 aa16.31■□□□□ 0.2
CLSTN3-205ENST00000535452 RAI14Q9P0K7 980 aa16.31■□□□□ 0.2
CLSTN3-205ENST00000535452 AK9Q5TCS8 1911 aa16.3■□□□□ 0.2
CLSTN3-205ENST00000535452 BTBD19C9JJ37 291 aa16.3■□□□□ 0.2
CLSTN3-205ENST00000535452 FMNL1O95466 1100 aaPredicted RBP16.3■□□□□ 0.2
CLSTN3-205ENST00000535452 MAP4K4O95819 1239 aaPredicted RBP16.3■□□□□ 0.2
CLSTN3-205ENST00000535452 UQCRFS1P1P0C7P4 283 aa16.3■□□□□ 0.2
CLSTN3-205ENST00000535452 INPP5BP32019 993 aa16.3■□□□□ 0.2
CLSTN3-205ENST00000535452 RGS3P49796 1198 aa16.3■□□□□ 0.2
CLSTN3-205ENST00000535452 TFCP2Q12800 502 aa16.3■□□□□ 0.2
CLSTN3-205ENST00000535452 CCDC158Q5M9N0 1113 aa16.3■□□□□ 0.2
CLSTN3-205ENST00000535452 ARMC5Q96C12 935 aa16.3■□□□□ 0.2
CLSTN3-205ENST00000535452 TRIM34Q9BYJ4 488 aa16.3■□□□□ 0.2
CLSTN3-205ENST00000535452 LRP2BPQ9P2M1 347 aa16.3■□□□□ 0.2
CLSTN3-205ENST00000535452 PDHXO00330 501 aa16.29■□□□□ 0.2
CLSTN3-205ENST00000535452 CXCL11O14625 94 aa16.29■□□□□ 0.2
CLSTN3-205ENST00000535452 BAG3O95817 575 aa16.29■□□□□ 0.2
CLSTN3-205ENST00000535452 ADORA1P30542 326 aa16.29■□□□□ 0.2
CLSTN3-205ENST00000535452 BTDP43251 543 aa16.29■□□□□ 0.2
CLSTN3-205ENST00000535452 LACTBP83111 547 aaPredicted RBP16.29■□□□□ 0.2
CLSTN3-205ENST00000535452 NFIAQ12857 509 aa16.29■□□□□ 0.2
CLSTN3-205ENST00000535452 MTX1Q13505 466 aa16.29■□□□□ 0.2
CLSTN3-205ENST00000535452 RASGRF1Q13972 1273 aa16.29■□□□□ 0.2
CLSTN3-205ENST00000535452 NOL9Q5SY16 702 aaKnown RBP16.29■□□□□ 0.2
CLSTN3-205ENST00000535452 RAET1EQ8TD07 263 aa16.29■□□□□ 0.2
CLSTN3-205ENST00000535452 CLUAP1Q96AJ1 413 aa16.29■□□□□ 0.2
CLSTN3-205ENST00000535452 IDI2Q9BXS1 227 aa16.29■□□□□ 0.2
CLSTN3-205ENST00000535452 OTOFQ9HC10 1997 aa16.29■□□□□ 0.2
CLSTN3-205ENST00000535452 MROH7-TTC4A0A0A0MT08 1334 aa16.28■□□□□ 0.2
CLSTN3-205ENST00000535452 ZBTB22O15209 634 aa16.28■□□□□ 0.2
CLSTN3-205ENST00000535452 TTC39AQ5SRH9 613 aa16.28■□□□□ 0.2
CLSTN3-205ENST00000535452 SCYL3Q8IZE3 742 aa16.28■□□□□ 0.2
CLSTN3-205ENST00000535452 SPATA5Q8NB90 893 aa16.28■□□□□ 0.2
CLSTN3-205ENST00000535452 SMCR8Q8TEV9 937 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms