RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 CACNB3P54284 484 aa11.63□□□□□ -0.55
CDCA3-204ENST00000535406 DIXDC1Q155Q3 683 aa11.63□□□□□ -0.55
CDCA3-204ENST00000535406 MAP3K11Q16584 847 aa11.63□□□□□ -0.55
CDCA3-204ENST00000535406 APOBEC3HQ6NTF7 200 aaKnown RBP11.63□□□□□ -0.55
CDCA3-204ENST00000535406 REM2Q8IYK8 340 aaPredicted RBP11.63□□□□□ -0.55
CDCA3-204ENST00000535406 TMEM39BQ9GZU3 492 aa11.63□□□□□ -0.55
CDCA3-204ENST00000535406 TSHZ2Q9NRE2 1034 aa11.63□□□□□ -0.55
CDCA3-204ENST00000535406 DDX19BQ9UMR2 479 aa11.63□□□□□ -0.55
CDCA3-204ENST00000535406 IREB2P48200 963 aaKnown RBP11.62□□□□□ -0.55
CDCA3-204ENST00000535406 TNNI3KQ59H18 835 aa11.62□□□□□ -0.55
CDCA3-204ENST00000535406 LDLRAD1Q5T700 205 aa11.62□□□□□ -0.55
CDCA3-204ENST00000535406 DZIP1Q86YF9 867 aaKnown RBP11.62□□□□□ -0.55
CDCA3-204ENST00000535406 HS6ST3Q8IZP7 471 aa11.62□□□□□ -0.55
CDCA3-204ENST00000535406 GPR108Q9NPR9 543 aa11.62□□□□□ -0.55
CDCA3-204ENST00000535406 SAGE1Q9NXZ1 904 aa11.62□□□□□ -0.55
CDCA3-204ENST00000535406 ABCF2Q9UG63 623 aa11.62□□□□□ -0.55
CDCA3-204ENST00000535406 COG6Q9Y2V7 657 aa11.62□□□□□ -0.55
CDCA3-204ENST00000535406 NOP58Q9Y2X3 529 aaKnown RBP11.62□□□□□ -0.55
CDCA3-204ENST00000535406 DAGLAQ9Y4D2 1042 aa11.62□□□□□ -0.55
CDCA3-204ENST00000535406 FPGT-TNNI3KV9GXZ4 949 aa11.62□□□□□ -0.55
CDCA3-204ENST00000535406 MYH2Q9UKX2 1941 aa11.62□□□□□ -0.55
CDCA3-204ENST00000535406 RPAP1Q9BWH6 1393 aaPredicted RBP11.62□□□□□ -0.55
CDCA3-204ENST00000535406 ARID4AP29374 1257 aaPredicted RBP11.61□□□□□ -0.55
CDCA3-204ENST00000535406 MKRN3Q13064 507 aaKnown RBP11.61□□□□□ -0.55
CDCA3-204ENST00000535406 FKBP1CQ5VVH2 108 aa11.61□□□□□ -0.55
CDCA3-204ENST00000535406 SPTY2D1Q68D10 685 aaPredicted RBP11.61□□□□□ -0.55
CDCA3-204ENST00000535406 FAM83AQ86UY5 434 aa11.61□□□□□ -0.55
CDCA3-204ENST00000535406 CDAN1Q8IWY9 1227 aa11.61□□□□□ -0.55
CDCA3-204ENST00000535406 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.61□□□□□ -0.55
CDCA3-204ENST00000535406 TEPSINQ96N21 525 aa11.61□□□□□ -0.55
CDCA3-204ENST00000535406 CSRNP1Q96S65 589 aa11.61□□□□□ -0.55
CDCA3-204ENST00000535406 CHMP4BQ9H444 224 aaKnown RBP11.61□□□□□ -0.55
CDCA3-204ENST00000535406 LAMB1P07942 1786 aa11.61□□□□□ -0.55
CDCA3-204ENST00000535406 MAST2Q6P0Q8 1798 aa11.61□□□□□ -0.55
CDCA3-204ENST00000535406 UNCXA6NJT0 531 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 USP2O75604 605 aaPredicted RBP11.6□□□□□ -0.55
CDCA3-204ENST00000535406 UQCRFS1P1P0C7P4 283 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 GSE1Q14687 1217 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 TTC39AQ5SRH9 613 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 PI16Q6UXB8 463 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 ERICH6Q7L0X2 663 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 SLF2Q8IX21 1173 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 ANKRD13AQ8IZ07 590 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 SPATA5Q8NB90 893 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 SLC10A4Q96EP9 437 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 CLMNQ96JQ2 1002 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 HMG20BQ9P0W2 317 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 TRPA1O75762 1119 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 MCAMP43121 646 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 SREBF2Q12772 1141 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 CCDC158Q5M9N0 1113 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 SPRYD7Q5W111 196 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 CDC42EP5Q6NZY7 148 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 ERC1Q8IUD2 1116 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 HOOK2Q96ED9 719 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 DBNDD2Q9BQY9 259 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 RNF186Q9NXI6 227 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 EXOC6BQ9Y2D4 811 aa11.6□□□□□ -0.55
CDCA3-204ENST00000535406 GAKO14976 1311 aa11.59□□□□□ -0.55
CDCA3-204ENST00000535406 HMMRO75330 724 aa11.59□□□□□ -0.55
CDCA3-204ENST00000535406 ZBTB48P10074 688 aaPredicted RBP11.59□□□□□ -0.55
CDCA3-204ENST00000535406 PDE3AQ14432 1141 aa11.59□□□□□ -0.55
CDCA3-204ENST00000535406 HSP90AB4PQ58FF6 505 aa11.59□□□□□ -0.55
CDCA3-204ENST00000535406 RPAP2Q8IXW5 612 aaPredicted RBP11.59□□□□□ -0.55
CDCA3-204ENST00000535406 WNK4Q96J92 1243 aa11.59□□□□□ -0.55
CDCA3-204ENST00000535406 ZBTB40Q9NUA8 1239 aa11.59□□□□□ -0.55
CDCA3-204ENST00000535406 USP40Q9NVE5 1235 aa11.59□□□□□ -0.55
CDCA3-204ENST00000535406 MROH7-TTC4A0A0A0MT08 1334 aa11.58□□□□□ -0.56
CDCA3-204ENST00000535406 CASP8AP2Q9UKL3 1982 aa11.58□□□□□ -0.56
CDCA3-204ENST00000535406 DOCK2Q92608 1830 aa11.58□□□□□ -0.56
CDCA3-204ENST00000535406 MANSC4A6NHS7 340 aaPredicted RBP11.58□□□□□ -0.56
CDCA3-204ENST00000535406 BTDP43251 543 aa11.58□□□□□ -0.56
CDCA3-204ENST00000535406 MECOMQ03112 1051 aa11.58□□□□□ -0.56
CDCA3-204ENST00000535406 TCP10Q12799 353 aa11.58□□□□□ -0.56
CDCA3-204ENST00000535406 NFIAQ12857 509 aa11.58□□□□□ -0.56
CDCA3-204ENST00000535406 C20orf194Q5TEA3 1177 aa11.58□□□□□ -0.56
CDCA3-204ENST00000535406 DCAF15Q66K64 600 aa11.58□□□□□ -0.56
CDCA3-204ENST00000535406 TBC1D9Q6ZT07 1266 aa11.58□□□□□ -0.56
CDCA3-204ENST00000535406 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.58□□□□□ -0.562e-7■■■■■ 42.5
CDCA3-204ENST00000535406 FAM151AQ8WW52 585 aa11.58□□□□□ -0.56
CDCA3-204ENST00000535406 ELP3Q9H9T3 547 aa11.58□□□□□ -0.56
CDCA3-204ENST00000535406 TLR7Q9NYK1 1049 aaKnown RBP11.58□□□□□ -0.56
CDCA3-204ENST00000535406 RAI14Q9P0K7 980 aa11.58□□□□□ -0.56
CDCA3-204ENST00000535406 DBNLQ9UJU6 430 aaKnown RBP11.58□□□□□ -0.56
CDCA3-204ENST00000535406 CSADQ9Y600 493 aa11.58□□□□□ -0.56
CDCA3-204ENST00000535406 AK9Q5TCS8 1911 aa11.57□□□□□ -0.56
CDCA3-204ENST00000535406 RFX7Q2KHR2 1363 aa11.57□□□□□ -0.56
CDCA3-204ENST00000535406 TM4SF4P48230 202 aa11.57□□□□□ -0.56
CDCA3-204ENST00000535406 GSTO1P78417 241 aa11.57□□□□□ -0.56
CDCA3-204ENST00000535406 VGLL4Q14135 290 aa11.57□□□□□ -0.56
CDCA3-204ENST00000535406 AACSQ86V21 672 aa11.57□□□□□ -0.56
CDCA3-204ENST00000535406 NSUN4Q96CB9 384 aaKnown RBP11.57□□□□□ -0.56
CDCA3-204ENST00000535406 EAF2Q96CJ1 260 aaPredicted RBP11.57□□□□□ -0.56
CDCA3-204ENST00000535406 OPTNQ96CV9 577 aa11.57□□□□□ -0.56
CDCA3-204ENST00000535406 FAM163AQ96GL9 167 aaPredicted RBP11.57□□□□□ -0.56
CDCA3-204ENST00000535406 ZNF512BQ96KM6 892 aaPredicted RBP11.57□□□□□ -0.56
CDCA3-204ENST00000535406 WRNIP1Q96S55 665 aa11.57□□□□□ -0.56
CDCA3-204ENST00000535406 CCDC8Q9H0W5 538 aaPredicted RBP11.57□□□□□ -0.56
CDCA3-204ENST00000535406 SNRKQ9NRH2 765 aa11.57□□□□□ -0.56
CDCA3-204ENST00000535406 LRP2BPQ9P2M1 347 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms