RNA–Protein interactions for RNA: ENST00000534763.1

CCS-209, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-209ENST00000534763 TCP10L2B9ZVM9 353 aa15.77■□□□□ 0.12
CCS-209ENST00000534763 NPM3O75607 178 aaKnown RBP15.77■□□□□ 0.12
CCS-209ENST00000534763 ZAP70P43403 619 aa15.77■□□□□ 0.12
CCS-209ENST00000534763 NOGQ13253 232 aa15.77■□□□□ 0.12
CCS-209ENST00000534763 HDAC1Q13547 482 aaPredicted RBP15.77■□□□□ 0.12
CCS-209ENST00000534763 LDLRAD1Q5T700 205 aa15.77■□□□□ 0.12
CCS-209ENST00000534763 CYP4F22Q6NT55 531 aa15.77■□□□□ 0.12
CCS-209ENST00000534763 TBC1D9Q6ZT07 1266 aa15.77■□□□□ 0.12
CCS-209ENST00000534763 ZNF384Q8TF68 577 aa15.77■□□□□ 0.12
CCS-209ENST00000534763 IDI2Q9BXS1 227 aa15.77■□□□□ 0.12
CCS-209ENST00000534763 APBB1O00213 710 aa15.76■□□□□ 0.11
CCS-209ENST00000534763 MAP2K1Q02750 393 aaPredicted RBP15.76■□□□□ 0.11
CCS-209ENST00000534763 TTF1Q15361 905 aaPredicted RBP15.76■□□□□ 0.11
CCS-209ENST00000534763 NBPF12Q5TAG4 269 aaPredicted RBP15.76■□□□□ 0.11
CCS-209ENST00000534763 FAM151AQ8WW52 585 aa15.76■□□□□ 0.11
CCS-209ENST00000534763 SNRKQ9NRH2 765 aa15.76■□□□□ 0.11
CCS-209ENST00000534763 USP40Q9NVE5 1235 aa15.76■□□□□ 0.11
CCS-209ENST00000534763 RAI14Q9P0K7 980 aa15.76■□□□□ 0.11
CCS-209ENST00000534763 SUPT16HQ9Y5B9 1047 aaKnown RBP15.76■□□□□ 0.11
CCS-209ENST00000534763 SSC5DA1L4H1 1573 aa15.75■□□□□ 0.11
CCS-209ENST00000534763 FAM155AB1AL88 458 aaPredicted RBP15.75■□□□□ 0.11
CCS-209ENST00000534763 ENTPD3O75355 529 aa15.75■□□□□ 0.11
CCS-209ENST00000534763 ATP5JP18859 108 aa15.75■□□□□ 0.11
CCS-209ENST00000534763 ZNF157P51786 506 aaPredicted RBP15.75■□□□□ 0.11
CCS-209ENST00000534763 PAXIP1Q6ZW49 1069 aaPredicted RBP15.75■□□□□ 0.11
CCS-209ENST00000534763 CERS3Q8IU89 383 aa15.75■□□□□ 0.11
CCS-209ENST00000534763 REM2Q8IYK8 340 aaPredicted RBP15.75■□□□□ 0.11
CCS-209ENST00000534763 TMEM39BQ9GZU3 492 aa15.75■□□□□ 0.11
CCS-209ENST00000534763 RFX7Q2KHR2 1363 aa15.75■□□□□ 0.11
CCS-209ENST00000534763 UBE2Q2LH0YL09 131 aa15.74■□□□□ 0.11
CCS-209ENST00000534763 SLC10A3P09131 477 aa15.74■□□□□ 0.11
CCS-209ENST00000534763 BTDP43251 543 aa15.74■□□□□ 0.11
CCS-209ENST00000534763 CACNB3P54284 484 aa15.74■□□□□ 0.11
CCS-209ENST00000534763 PPP4CP60510 307 aa15.74■□□□□ 0.11
CCS-209ENST00000534763 TTLL12Q14166 644 aaPredicted RBP15.74■□□□□ 0.11
CCS-209ENST00000534763 NAA16Q6N069 864 aaPredicted RBP15.74■□□□□ 0.11
CCS-209ENST00000534763 GCC1Q96CN9 775 aa15.74■□□□□ 0.11
CCS-209ENST00000534763 PIH1D3Q9NQM4 214 aaKnown RBP15.74■□□□□ 0.11
CCS-209ENST00000534763 AKAP11Q9UKA4 1901 aa15.74■□□□□ 0.11
CCS-209ENST00000534763 BAG3O95817 575 aa15.73■□□□□ 0.11
CCS-209ENST00000534763 PLCG2P16885 1265 aa15.73■□□□□ 0.11
CCS-209ENST00000534763 IREB2P48200 963 aaKnown RBP15.73■□□□□ 0.11
CCS-209ENST00000534763 RHBDL3P58872 404 aa15.73■□□□□ 0.11
CCS-209ENST00000534763 MAP3K12Q12852 859 aa15.73■□□□□ 0.11
CCS-209ENST00000534763 WBP1LQ9NX94 342 aa15.73■□□□□ 0.11
CCS-209ENST00000534763 FAM198AQ9UFP1 575 aa15.73■□□□□ 0.11
CCS-209ENST00000534763 ANGEL1Q9UNK9 670 aaKnown RBP15.73■□□□□ 0.11
CCS-209ENST00000534763 USP2O75604 605 aaPredicted RBP15.72■□□□□ 0.11
CCS-209ENST00000534763 WDHD1O75717 1129 aaPredicted RBP15.72■□□□□ 0.11
CCS-209ENST00000534763 NFIAQ12857 509 aa15.72■□□□□ 0.11
CCS-209ENST00000534763 DCAF15Q66K64 600 aa15.72■□□□□ 0.11
CCS-209ENST00000534763 MOB2Q70IA6 237 aa15.72■□□□□ 0.11
CCS-209ENST00000534763 RASAL3Q86YV0 1011 aa15.72■□□□□ 0.11
CCS-209ENST00000534763 HAUS7Q99871 368 aa15.72■□□□□ 0.11
CCS-209ENST00000534763 NOL10Q9BSC4 688 aaKnown RBP15.72■□□□□ 0.11
CCS-209ENST00000534763 ECHDC1Q9NTX5 307 aa15.72■□□□□ 0.11
CCS-209ENST00000534763 PCNTO95613 3336 aa15.71■□□□□ 0.11
CCS-209ENST00000534763 SMARCA5O60264 1052 aaPredicted RBP15.71■□□□□ 0.11
CCS-209ENST00000534763 ANKRD13AQ8IZ07 590 aa15.71■□□□□ 0.11
CCS-209ENST00000534763 GPATCH3Q96I76 525 aa15.71■□□□□ 0.11
CCS-209ENST00000534763 RWDD1Q9H446 243 aaPredicted RBP15.71■□□□□ 0.11
CCS-209ENST00000534763 MAST2Q6P0Q8 1798 aa15.71■□□□□ 0.11
CCS-209ENST00000534763 COL2A1P02458 1487 aaPredicted RBP15.71■□□□□ 0.1
CCS-209ENST00000534763 CA12O43570 354 aa15.7■□□□□ 0.1
CCS-209ENST00000534763 AOC2O75106 756 aa15.7■□□□□ 0.1
CCS-209ENST00000534763 IDH1O75874 414 aaKnown RBP15.7■□□□□ 0.1
CCS-209ENST00000534763 HSPA1AP0DMV8 641 aaKnown RBP15.7■□□□□ 0.1
CCS-209ENST00000534763 HSPA1BP0DMV9 641 aaKnown RBP15.7■□□□□ 0.1
CCS-209ENST00000534763 RGS3P49796 1198 aa15.7■□□□□ 0.1
CCS-209ENST00000534763 CDAN1Q8IWY9 1227 aa15.7■□□□□ 0.1
CCS-209ENST00000534763 EXOC6Q8TAG9 804 aa15.7■□□□□ 0.1
CCS-209ENST00000534763 ANTXR1Q9H6X2 564 aa15.7■□□□□ 0.1
CCS-209ENST00000534763 MYH2Q9UKX2 1941 aa15.7■□□□□ 0.1
CCS-209ENST00000534763 TTC41PQ6P2S7 1318 aa15.69■□□□□ 0.1
CCS-209ENST00000534763 ZBTB48P10074 688 aaPredicted RBP15.69■□□□□ 0.1
CCS-209ENST00000534763 MAP3K9P80192 1104 aa15.69■□□□□ 0.1
CCS-209ENST00000534763 MAP3K10Q02779 954 aa15.69■□□□□ 0.1
CCS-209ENST00000534763 TCP10Q12799 353 aa15.69■□□□□ 0.1
CCS-209ENST00000534763 GRM1Q13255 1194 aa15.69■□□□□ 0.1
CCS-209ENST00000534763 PRKG1Q13976 671 aa15.69■□□□□ 0.1
CCS-209ENST00000534763 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.69■□□□□ 0.13e-9■■■■■ 39
CCS-209ENST00000534763 AIDAQ96BJ3 306 aa15.69■□□□□ 0.1
CCS-209ENST00000534763 SLC10A4Q96EP9 437 aa15.69■□□□□ 0.1
CCS-209ENST00000534763 PAG1Q9NWQ8 432 aa15.69■□□□□ 0.1
CCS-209ENST00000534763 ATRNL1Q5VV63 1379 aa15.69■□□□□ 0.1
CCS-209ENST00000534763 GOLIM4O00461 696 aa15.68■□□□□ 0.1
CCS-209ENST00000534763 CYP7A1P22680 504 aa15.68■□□□□ 0.1
CCS-209ENST00000534763 ADGRA1Q86SQ6 560 aa15.68■□□□□ 0.1
CCS-209ENST00000534763 SMC5Q8IY18 1101 aa15.68■□□□□ 0.1
CCS-209ENST00000534763 MAGEB6Q8N7X4 407 aa15.68■□□□□ 0.1
CCS-209ENST00000534763 DNAJC2Q99543 621 aaKnown RBP15.68■□□□□ 0.1
CCS-209ENST00000534763 BEGAINQ9BUH8 593 aa15.68■□□□□ 0.1
CCS-209ENST00000534763 ZNF341Q9BYN7 854 aa15.68■□□□□ 0.1
CCS-209ENST00000534763 BOLA2Q9H3K6 86 aa15.68■□□□□ 0.1
CCS-209ENST00000534763 ZBTB47Q9UFB7 747 aaPredicted RBP15.68■□□□□ 0.1
CCS-209ENST00000534763 ZNF112Q9UJU3 913 aa15.68■□□□□ 0.1
CCS-209ENST00000534763 NDUFB9Q9Y6M9 179 aa15.68■□□□□ 0.1
CCS-209ENST00000534763 TBC1D12O60347 775 aa15.67■□□□□ 0.1
CCS-209ENST00000534763 INHBEP58166 350 aa15.67■□□□□ 0.1
CCS-209ENST00000534763 KIF23Q02241 960 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms