RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 ARHGEF25Q86VW2 580 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 RHPN1Q8TCX5 695 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 FBXO41Q8TF61 875 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 NAP1L3Q99457 506 aaPredicted RBP13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 SLC26A6Q9BXS9 759 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 MBIPQ9NS73 344 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 VGLL3A8MV65 326 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 ALDH1B1P30837 517 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 CAPZA3Q96KX2 299 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 RBM8AQ9Y5S9 174 aaKnown RBP13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 ALDH3A1P30838 453 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 ELF2Q15723 593 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 GRIPAP1Q4V328 841 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 DPY19L2Q6NUT2 758 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 CABP5Q9NP86 173 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 MTRF1LQ9UGC7 380 aaKnown RBP13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 SERPINA10Q9UK55 444 aa13.66□□□□□ -0.22
AMBRA1-212ENST00000534300 KLF18A0A0U1RQI7 1052 aa13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 AFMP43652 599 aa13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 ATP11AP98196 1134 aa13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 TTF1Q15361 905 aaPredicted RBP13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 TRIM7Q9C029 511 aa13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 PCK1P35558 622 aa13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 TSNARE1Q96NA8 513 aa13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 ALG1Q9BT22 464 aa13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 CHPF2Q9P2E5 772 aa13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 NSFL1CQ9UNZ2 370 aaKnown RBP13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 SYNMO15061 1565 aa13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 MYL5Q02045 173 aa13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 FMNL3Q8IVF7 1028 aa13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 IFT81Q8WYA0 676 aa13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 TLDC2A0PJX2 215 aa13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 MPHOSPH10O00566 681 aaKnown RBP13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 GIGYF1O75420 1035 aaPredicted RBP13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 CHMP4BP1P59074 171 aa13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 ZSCAN26Q16670 478 aa13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 CACNA2D3Q8IZS8 1091 aa13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 TBC1D5Q92609 795 aa13.65□□□□□ -0.22
AMBRA1-212ENST00000534300 GOLGA6CA6NDK9 693 aa13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 KIF3CO14782 793 aa13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 GOLGA6DP0CG33 693 aa13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 SETSIPP0DME0 302 aa13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 TSHZ3Q63HK5 1081 aa13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 CCDC110Q8TBZ0 833 aa13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 GOLGA6AQ9NYA3 693 aa13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 ZNF500O60304 480 aaPredicted RBP13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 CARD6Q9BX69 1037 aa13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 ZNF444Q8N0Y2 327 aaPredicted RBP13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 MIPOL1Q8TD10 442 aa13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 MYCBPQ99417 103 aaPredicted RBP13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 CDC42BPAQ5VT25 1732 aa13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 INSRP06213 1382 aa13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 NOL3O60936 208 aaKnown RBP13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 HOXB7P09629 217 aa13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 FERMT1Q9BQL6 677 aa13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 BCL2L12Q9HB09 334 aa13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 SWAP70Q9UH65 585 aa13.64□□□□□ -0.23
AMBRA1-212ENST00000534300 SH3TC1Q8TE82 1336 aa13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 AKR1B15C9JRZ8 316 aaPredicted RBP13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 TMTC2Q8N394 836 aa13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 STMN2Q93045 179 aa13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 GJD4Q96KN9 370 aaPredicted RBP13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 ADGRB3O60242 1522 aa13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 IRS4O14654 1257 aaPredicted RBP13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 INTS8Q75QN2 995 aaKnown RBP13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 GCC2Q8IWJ2 1684 aa13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 ZBTB43O43298 467 aa13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 TNNI2P48788 182 aa13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 NAPGQ99747 312 aaPredicted RBP13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 MMRN2Q9H8L6 949 aa13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 DDX21Q9NR30 783 aaKnown RBP eCLIP13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 KIF1BO60333 1816 aa13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 DIP2CQ9Y2E4 1556 aa13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 MARCKSP29966 332 aaPredicted RBP13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 STAT6P42226 847 aa13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 IMPACTQ9P2X3 320 aa13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 WWC3Q9ULE0 1092 aa13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 BCS1LQ9Y276 419 aa13.63□□□□□ -0.23
AMBRA1-212ENST00000534300 KDM4FA0A1W2PPD8 638 aa13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 SEC24BO95487 1268 aa13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 CCDC122Q5T0U0 273 aa13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 LINS1Q8NG48 757 aa13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 TTF2Q9UNY4 1162 aaKnown RBP13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 BUB1BO60566 1050 aaPredicted RBP13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 KRT13P13646 458 aa13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 OAS2P29728 719 aaKnown RBP13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 TSNAXIP1Q2TAA8 658 aa13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 MFSD6Q6ZSS7 791 aa13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 CABS1Q96KC9 395 aa13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 TCEANC2Q96MN5 208 aa13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 CARD14Q9BXL6 1004 aa13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 TSGA10Q9BZW7 698 aa13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 KIF24Q5T7B8 1368 aa13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 AK2P54819 239 aa13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 HAND2P61296 217 aa13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 PPFIA1Q13136 1202 aa13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 BRAPQ7Z569 592 aa13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 CNKSR1Q969H4 720 aa13.62□□□□□ -0.23
AMBRA1-212ENST00000534300 PPFIA3O75145 1194 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms