RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 FRAT2O75474 233 aaPredicted RBP10.87□□□□□ -0.67
COPB1-210ENST00000533533 CACNB3P54284 484 aa10.87□□□□□ -0.67
COPB1-210ENST00000533533 CHAF1AQ13111 956 aaPredicted RBP10.87□□□□□ -0.67
COPB1-210ENST00000533533 SLC9C1Q4G0N8 1177 aa10.87□□□□□ -0.67
COPB1-210ENST00000533533 CAVIN4Q5BKX8 364 aa10.87□□□□□ -0.67
COPB1-210ENST00000533533 NBPF11Q86T75 865 aa10.87□□□□□ -0.67
COPB1-210ENST00000533533 ERO1BQ86YB8 467 aa10.87□□□□□ -0.67
COPB1-210ENST00000533533 TEKT1Q969V4 418 aa10.87□□□□□ -0.67
COPB1-210ENST00000533533 MRIQ9BWK5 157 aa10.87□□□□□ -0.67
COPB1-210ENST00000533533 BICC1Q9H694 974 aaKnown RBP10.87□□□□□ -0.67
COPB1-210ENST00000533533 PTCH2Q9Y6C5 1203 aa10.87□□□□□ -0.67
COPB1-210ENST00000533533 WDHD1O75717 1129 aaPredicted RBP10.86□□□□□ -0.67
COPB1-210ENST00000533533 PDE8BO95263 885 aa10.86□□□□□ -0.67
COPB1-210ENST00000533533 CETPP11597 493 aa10.86□□□□□ -0.67
COPB1-210ENST00000533533 RABL6Q3YEC7 729 aaPredicted RBP10.86□□□□□ -0.67
COPB1-210ENST00000533533 LRRC24Q50LG9 513 aa10.86□□□□□ -0.67
COPB1-210ENST00000533533 METTL24Q5JXM2 366 aa10.86□□□□□ -0.67
COPB1-210ENST00000533533 FKBP1CQ5VVH2 108 aa10.86□□□□□ -0.67
COPB1-210ENST00000533533 ZKSCAN2Q63HK3 967 aa10.86□□□□□ -0.67
COPB1-210ENST00000533533 FAM83AQ86UY5 434 aa10.86□□□□□ -0.67
COPB1-210ENST00000533533 VGLL2Q8N8G2 317 aa10.86□□□□□ -0.67
COPB1-210ENST00000533533 ZDHHC15Q96MV8 337 aa10.86□□□□□ -0.67
COPB1-210ENST00000533533 SNCAIPQ9Y6H5 919 aa10.86□□□□□ -0.67
COPB1-210ENST00000533533 ZSWIM8A7E2V4 1837 aa10.86□□□□□ -0.67
COPB1-210ENST00000533533 SZT2Q5T011 3432 aa10.86□□□□□ -0.67
COPB1-210ENST00000533533 TLR2O60603 784 aa10.85□□□□□ -0.67
COPB1-210ENST00000533533 BCAMP50895 628 aa10.85□□□□□ -0.67
COPB1-210ENST00000533533 SNAPC2Q13487 334 aa10.85□□□□□ -0.67
COPB1-210ENST00000533533 APOBEC3HQ6NTF7 200 aaKnown RBP10.85□□□□□ -0.67
COPB1-210ENST00000533533 ATF7IPQ6VMQ6 1270 aa10.85□□□□□ -0.67
COPB1-210ENST00000533533 FTSJ3Q8IY81 847 aaKnown RBP10.85□□□□□ -0.67
COPB1-210ENST00000533533 ANKRD44Q8N8A2 993 aa10.85□□□□□ -0.67
COPB1-210ENST00000533533 ARHGAP45Q92619 1136 aa10.85□□□□□ -0.67
COPB1-210ENST00000533533 ZKSCAN4Q969J2 545 aaPredicted RBP10.85□□□□□ -0.67
COPB1-210ENST00000533533 HOOK2Q96ED9 719 aa10.85□□□□□ -0.67
COPB1-210ENST00000533533 WRNIP1Q96S55 665 aa10.85□□□□□ -0.67
COPB1-210ENST00000533533 ZCCHC17Q9NP64 241 aaKnown RBP10.85□□□□□ -0.67
COPB1-210ENST00000533533 TMOD2Q9NZR1 351 aa10.85□□□□□ -0.67
COPB1-210ENST00000533533 TNNQ9UQP3 1299 aa10.85□□□□□ -0.67
COPB1-210ENST00000533533 SUGT1Q9Y2Z0 365 aa10.85□□□□□ -0.67
COPB1-210ENST00000533533 MAST3O60307 1309 aa10.84□□□□□ -0.67
COPB1-210ENST00000533533 BTBD19C9JJ37 291 aa10.84□□□□□ -0.67
COPB1-210ENST00000533533 IRF6O14896 467 aa10.84□□□□□ -0.67
COPB1-210ENST00000533533 UBTFL1P0CB47 393 aaPredicted RBP10.84□□□□□ -0.67
COPB1-210ENST00000533533 TRIM27P14373 513 aa10.84□□□□□ -0.67
COPB1-210ENST00000533533 LACTBP83111 547 aaPredicted RBP10.84□□□□□ -0.67
COPB1-210ENST00000533533 PPIL2Q13356 520 aa10.84□□□□□ -0.67
COPB1-210ENST00000533533 KIF22Q14807 665 aa10.84□□□□□ -0.67
COPB1-210ENST00000533533 SLC4A8Q2Y0W8 1093 aa10.84□□□□□ -0.67
COPB1-210ENST00000533533 HHIPL2Q6UWX4 724 aa10.84□□□□□ -0.67
COPB1-210ENST00000533533 ARHGAP39Q9C0H5 1083 aa10.84□□□□□ -0.67
COPB1-210ENST00000533533 RCAN3Q9UKA8 241 aa10.84□□□□□ -0.67
COPB1-210ENST00000533533 RPAP1Q9BWH6 1393 aaPredicted RBP10.83□□□□□ -0.68
COPB1-210ENST00000533533 GNRH1P01148 92 aa10.83□□□□□ -0.68
COPB1-210ENST00000533533 FGFR2P21802 821 aa10.83□□□□□ -0.68
COPB1-210ENST00000533533 PPATQ06203 517 aa10.83□□□□□ -0.68
COPB1-210ENST00000533533 PUM3Q15397 648 aaKnown RBP10.83□□□□□ -0.68
COPB1-210ENST00000533533 DCAF15Q66K64 600 aa10.83□□□□□ -0.68
COPB1-210ENST00000533533 KLHDC4Q8TBB5 520 aa10.83□□□□□ -0.68
COPB1-210ENST00000533533 USP44Q9H0E7 712 aa10.83□□□□□ -0.68
COPB1-210ENST00000533533 DOCK3Q8IZD9 2030 aa10.82□□□□□ -0.68
COPB1-210ENST00000533533 MYCP01106 439 aaPredicted RBP10.82□□□□□ -0.68
COPB1-210ENST00000533533 IFIT1P09914 478 aaKnown RBP10.82□□□□□ -0.68
COPB1-210ENST00000533533 INPP5BP32019 993 aa10.82□□□□□ -0.68
COPB1-210ENST00000533533 PRMT2P55345 433 aa10.82□□□□□ -0.68
COPB1-210ENST00000533533 MIGA2Q7L4E1 593 aa10.82□□□□□ -0.68
COPB1-210ENST00000533533 SH3TC2Q8TF17 1288 aa10.82□□□□□ -0.68
COPB1-210ENST00000533533 ZNF341Q9BYN7 854 aa10.82□□□□□ -0.68
COPB1-210ENST00000533533 FXR1P51114 621 aaKnown RBP eCLIP10.81□□□□□ -0.684e-7■■■■■ 30.9
COPB1-210ENST00000533533 C17orf99Q6UX52 265 aa10.81□□□□□ -0.68
COPB1-210ENST00000533533 ITPRIPQ8IWB1 547 aa10.81□□□□□ -0.68
COPB1-210ENST00000533533 TMEM57Q8N5G2 664 aa10.81□□□□□ -0.68
COPB1-210ENST00000533533 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.81□□□□□ -0.68
COPB1-210ENST00000533533 WDR66Q8TBY9 1149 aa10.81□□□□□ -0.68
COPB1-210ENST00000533533 FAM151AQ8WW52 585 aa10.81□□□□□ -0.68
COPB1-210ENST00000533533 MEIS3Q99687 375 aa10.81□□□□□ -0.68
COPB1-210ENST00000533533 HDAC5Q9UQL6 1122 aa10.81□□□□□ -0.68
COPB1-210ENST00000533533 MGAMO43451 1857 aa10.81□□□□□ -0.68
COPB1-210ENST00000533533 MYH2Q9UKX2 1941 aa10.8□□□□□ -0.68
COPB1-210ENST00000533533 CUL9Q8IWT3 2517 aa10.8□□□□□ -0.68
COPB1-210ENST00000533533 EYA2O00167 538 aa10.8□□□□□ -0.68
COPB1-210ENST00000533533 GNAI3P08754 354 aa10.8□□□□□ -0.68
COPB1-210ENST00000533533 SLC5A1P13866 664 aa10.8□□□□□ -0.68
COPB1-210ENST00000533533 CTGFP29279 349 aa10.8□□□□□ -0.68
COPB1-210ENST00000533533 RFX5P48382 616 aaPredicted RBP10.8□□□□□ -0.68
COPB1-210ENST00000533533 CDC42EP5Q6NZY7 148 aa10.8□□□□□ -0.68
COPB1-210ENST00000533533 ANKRD23Q86SG2 305 aa10.8□□□□□ -0.68
COPB1-210ENST00000533533 LPIN2Q92539 896 aa10.8□□□□□ -0.68
COPB1-210ENST00000533533 TRIM47Q96LD4 638 aa10.8□□□□□ -0.68
COPB1-210ENST00000533533 SRRDQ9UH36 339 aa10.8□□□□□ -0.68
COPB1-210ENST00000533533 CPA4Q9UI42 421 aa10.8□□□□□ -0.68
COPB1-210ENST00000533533 ZNF112Q9UJU3 913 aa10.8□□□□□ -0.68
COPB1-210ENST00000533533 KCNH4Q9UQ05 1017 aa10.8□□□□□ -0.68
COPB1-210ENST00000533533 COLQQ9Y215 455 aaPredicted RBP10.8□□□□□ -0.68
COPB1-210ENST00000533533 DAGLAQ9Y4D2 1042 aa10.8□□□□□ -0.68
COPB1-210ENST00000533533 LRRFIP2Q9Y608 721 aaKnown RBP10.8□□□□□ -0.68
COPB1-210ENST00000533533 PDHXO00330 501 aa10.79□□□□□ -0.68
COPB1-210ENST00000533533 ECM2O94769 699 aaPredicted RBP10.79□□□□□ -0.68
COPB1-210ENST00000533533 MS4A1P11836 297 aa10.79□□□□□ -0.68
COPB1-210ENST00000533533 HOXD10P28358 340 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms