RNA–Protein interactions for RNA: ENST00000533110.5

CTSB-227, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-227ENST00000533110 STK31Q9BXU1 1019 aa11.76□□□□□ -0.53
CTSB-227ENST00000533110 MYH16Q9H6N6 1097 aa11.76□□□□□ -0.53
CTSB-227ENST00000533110 PAK6Q9NQU5 681 aaPredicted RBP11.76□□□□□ -0.53
CTSB-227ENST00000533110 IFT57Q9NWB7 429 aa11.76□□□□□ -0.53
CTSB-227ENST00000533110 CSF1RP07333 972 aa11.75□□□□□ -0.53
CTSB-227ENST00000533110 BCRP11274 1271 aa11.75□□□□□ -0.53
CTSB-227ENST00000533110 GCKRQ14397 625 aa11.75□□□□□ -0.53
CTSB-227ENST00000533110 TAF7LQ5H9L4 462 aa11.75□□□□□ -0.53
CTSB-227ENST00000533110 ANKLE1Q8NAG6 615 aa11.75□□□□□ -0.53
CTSB-227ENST00000533110 TEKT1Q969V4 418 aa11.75□□□□□ -0.53
CTSB-227ENST00000533110 CRISPLD2Q9H0B8 497 aa11.75□□□□□ -0.53
CTSB-227ENST00000533110 PRDM6Q9NQX0 595 aa11.75□□□□□ -0.53
CTSB-227ENST00000533110 CYP2C8P10632 490 aa11.74□□□□□ -0.53
CTSB-227ENST00000533110 HIBADHP31937 336 aaKnown RBP11.74□□□□□ -0.53
CTSB-227ENST00000533110 INPP5BP32019 993 aa11.74□□□□□ -0.53
CTSB-227ENST00000533110 IRF5Q13568 498 aa11.74□□□□□ -0.53
CTSB-227ENST00000533110 FAM83AQ86UY5 434 aa11.74□□□□□ -0.53
CTSB-227ENST00000533110 C8orf58Q8NAV2 365 aa11.74□□□□□ -0.53
CTSB-227ENST00000533110 TDRD7Q8NHU6 1098 aaKnown RBP11.74□□□□□ -0.53
CTSB-227ENST00000533110 SMCR8Q8TEV9 937 aaPredicted RBP11.74□□□□□ -0.53
CTSB-227ENST00000533110 NBPF3Q9H094 633 aa11.74□□□□□ -0.53
CTSB-227ENST00000533110 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.74□□□□□ -0.531e-7■□□□□ 10.2
CTSB-227ENST00000533110 KCNH4Q9UQ05 1017 aa11.74□□□□□ -0.53
CTSB-227ENST00000533110 RPAP1Q9BWH6 1393 aaPredicted RBP11.74□□□□□ -0.53
CTSB-227ENST00000533110 ZNF853P0CG23 659 aa11.73□□□□□ -0.53
CTSB-227ENST00000533110 GYG1P46976 350 aa11.73□□□□□ -0.53
CTSB-227ENST00000533110 HDLBPQ00341 1268 aaKnown RBP11.73□□□□□ -0.53
CTSB-227ENST00000533110 MIGA2Q7L4E1 593 aa11.73□□□□□ -0.53
CTSB-227ENST00000533110 VPS37DQ86XT2 251 aa11.73□□□□□ -0.53
CTSB-227ENST00000533110 COA7Q96BR5 231 aa11.73□□□□□ -0.53
CTSB-227ENST00000533110 C11orf49Q9H6J7 331 aa11.73□□□□□ -0.53
CTSB-227ENST00000533110 CNNM1Q9NRU3 951 aa11.73□□□□□ -0.53
CTSB-227ENST00000533110 FRAT2O75474 233 aaPredicted RBP11.72□□□□□ -0.53
CTSB-227ENST00000533110 CHAF1AQ13111 956 aaPredicted RBP11.72□□□□□ -0.53
CTSB-227ENST00000533110 FKBP1CQ5VVH2 108 aa11.72□□□□□ -0.53
CTSB-227ENST00000533110 LDHAL6AQ6ZMR3 332 aa11.72□□□□□ -0.53
CTSB-227ENST00000533110 FASTKD5Q7L8L6 764 aaKnown RBP11.72□□□□□ -0.53
CTSB-227ENST00000533110 TBC1D22AQ8WUA7 517 aa11.72□□□□□ -0.53
CTSB-227ENST00000533110 MAST3O60307 1309 aa11.71□□□□□ -0.53
CTSB-227ENST00000533110 CXCL11O14625 94 aa11.71□□□□□ -0.53
CTSB-227ENST00000533110 CASP7P55210 303 aa11.71□□□□□ -0.53
CTSB-227ENST00000533110 MOGSQ13724 837 aa11.71□□□□□ -0.53
CTSB-227ENST00000533110 UBE4AQ14139 1066 aa11.71□□□□□ -0.53
CTSB-227ENST00000533110 RALBP1Q15311 655 aa11.71□□□□□ -0.53
CTSB-227ENST00000533110 CCDC57Q2TAC2 916 aa11.71□□□□□ -0.53
CTSB-227ENST00000533110 ZNF697Q5TEC3 545 aa11.71□□□□□ -0.53
CTSB-227ENST00000533110 FAM109BQ6ICB4 259 aaPredicted RBP11.71□□□□□ -0.53
CTSB-227ENST00000533110 FAM161BQ96MY7 647 aa11.71□□□□□ -0.53
CTSB-227ENST00000533110 GUCD1Q96NT3 240 aa11.71□□□□□ -0.53
CTSB-227ENST00000533110 A0A1B0GUL6 1792 aa11.7□□□□□ -0.54
CTSB-227ENST00000533110 HMGCRP04035 888 aa11.7□□□□□ -0.54
CTSB-227ENST00000533110 NOL9Q5SY16 702 aaKnown RBP11.7□□□□□ -0.54
CTSB-227ENST00000533110 GPAT2Q6NUI2 795 aa11.7□□□□□ -0.54
CTSB-227ENST00000533110 GADL1Q6ZQY3 521 aa11.7□□□□□ -0.54
CTSB-227ENST00000533110 LINS1Q8NG48 757 aa11.7□□□□□ -0.54
CTSB-227ENST00000533110 ZDHHC15Q96MV8 337 aa11.7□□□□□ -0.54
CTSB-227ENST00000533110 ALPK3Q96L96 1907 aa11.69□□□□□ -0.54
CTSB-227ENST00000533110 DNAAF4Q8WXU2 420 aa11.69□□□□□ -0.54
CTSB-227ENST00000533110 SYMPKQ92797 1274 aaKnown RBP11.69□□□□□ -0.54
CTSB-227ENST00000533110 ZNF594Q96JF6 807 aaPredicted RBP11.69□□□□□ -0.54
CTSB-227ENST00000533110 FAM84BQ96KN1 310 aaPredicted RBP11.69□□□□□ -0.54
CTSB-227ENST00000533110 HMX1Q9NP08 348 aaPredicted RBP11.69□□□□□ -0.54
CTSB-227ENST00000533110 PICK1Q9NRD5 415 aa11.69□□□□□ -0.54
CTSB-227ENST00000533110 IQSEC3Q9UPP2 1182 aaPredicted RBP11.69□□□□□ -0.54
CTSB-227ENST00000533110 VCANP13611 3396 aa11.68□□□□□ -0.54
CTSB-227ENST00000533110 FOXO4P98177 505 aa11.68□□□□□ -0.54
CTSB-227ENST00000533110 MDM2Q00987 491 aaPredicted RBP11.68□□□□□ -0.54
CTSB-227ENST00000533110 TCP10Q12799 353 aa11.68□□□□□ -0.54
CTSB-227ENST00000533110 FKBP5Q13451 457 aaPredicted RBP11.68□□□□□ -0.54
CTSB-227ENST00000533110 GRIK5Q16478 980 aa11.68□□□□□ -0.54
CTSB-227ENST00000533110 CAVIN4Q5BKX8 364 aa11.68□□□□□ -0.54
CTSB-227ENST00000533110 LMBR1LQ6UX01 489 aa11.68□□□□□ -0.54
CTSB-227ENST00000533110 TSPYL6Q8N831 410 aa11.68□□□□□ -0.54
CTSB-227ENST00000533110 MAFAQ8NHW3 353 aaPredicted RBP11.68□□□□□ -0.54
CTSB-227ENST00000533110 ZNF112Q9UJU3 913 aa11.68□□□□□ -0.54
CTSB-227ENST00000533110 SLC45A1Q9Y2W3 748 aa11.68□□□□□ -0.54
CTSB-227ENST00000533110 MGAMO43451 1857 aa11.68□□□□□ -0.54
CTSB-227ENST00000533110 A0A0G2JLL6 359 aaPredicted RBP11.67□□□□□ -0.54
CTSB-227ENST00000533110 POTEB2H3BUK9 544 aa11.67□□□□□ -0.54
CTSB-227ENST00000533110 SLC4A2P04920 1241 aa11.67□□□□□ -0.54
CTSB-227ENST00000533110 COL9A1P20849 921 aa11.67□□□□□ -0.54
CTSB-227ENST00000533110 FLIIQ13045 1269 aa11.67□□□□□ -0.54
CTSB-227ENST00000533110 APOBEC3HQ6NTF7 200 aaKnown RBP11.67□□□□□ -0.54
CTSB-227ENST00000533110 G2E3Q7L622 706 aa11.67□□□□□ -0.54
CTSB-227ENST00000533110 PRRT2Q7Z6L0 340 aaPredicted RBP11.67□□□□□ -0.54
CTSB-227ENST00000533110 ANKRD13CQ8N6S4 541 aa11.67□□□□□ -0.54
CTSB-227ENST00000533110 FAM151AQ8WW52 585 aa11.67□□□□□ -0.54
CTSB-227ENST00000533110 LBHD1Q9BQE6 289 aaPredicted RBP11.67□□□□□ -0.54
CTSB-227ENST00000533110 PNMA3Q9UL41 463 aa11.67□□□□□ -0.54
CTSB-227ENST00000533110 ADAMTS8Q9UP79 889 aa11.67□□□□□ -0.54
CTSB-227ENST00000533110 ZHX2Q9Y6X8 837 aa11.67□□□□□ -0.54
CTSB-227ENST00000533110 MYBBP1AQ9BQG0 1328 aaKnown RBP11.66□□□□□ -0.54
CTSB-227ENST00000533110 FAM110CQ1W6H9 321 aa11.66□□□□□ -0.54
CTSB-227ENST00000533110 HHIPL2Q6UWX4 724 aa11.66□□□□□ -0.54
CTSB-227ENST00000533110 SCYL3Q8IZE3 742 aa11.66□□□□□ -0.54
CTSB-227ENST00000533110 MRIQ9BWK5 157 aa11.66□□□□□ -0.54
CTSB-227ENST00000533110 OGDHLQ9ULD0 1010 aa11.66□□□□□ -0.54
CTSB-227ENST00000533110 SUGT1Q9Y2Z0 365 aa11.66□□□□□ -0.54
CTSB-227ENST00000533110 DDX60LQ5H9U9 1706 aaKnown RBP11.66□□□□□ -0.54
CTSB-227ENST00000533110 ZEB1P37275 1124 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms