RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 FZD1Q9UP38 647 aa18.86■□□□□ 0.61
CPSF1-210ENST00000532935 GAKO14976 1311 aa18.85■□□□□ 0.61
CPSF1-210ENST00000532935 MAP3K11Q16584 847 aa18.85■□□□□ 0.61
CPSF1-210ENST00000532935 LDLRAD1Q5T700 205 aa18.85■□□□□ 0.61
CPSF1-210ENST00000532935 CDC42EP5Q6NZY7 148 aa18.85■□□□□ 0.61
CPSF1-210ENST00000532935 TBC1D9Q6ZT07 1266 aa18.85■□□□□ 0.61
CPSF1-210ENST00000532935 FAM83AQ86UY5 434 aa18.85■□□□□ 0.61
CPSF1-210ENST00000532935 AACSQ86V21 672 aa18.85■□□□□ 0.61
CPSF1-210ENST00000532935 CDAN1Q8IWY9 1227 aa18.85■□□□□ 0.61
CPSF1-210ENST00000532935 SLF2Q8IX21 1173 aa18.85■□□□□ 0.61
CPSF1-210ENST00000532935 ZNF512BQ96KM6 892 aaPredicted RBP18.85■□□□□ 0.61
CPSF1-210ENST00000532935 APBB1O00213 710 aa18.84■□□□□ 0.61
CPSF1-210ENST00000532935 MECOMQ03112 1051 aa18.84■□□□□ 0.61
CPSF1-210ENST00000532935 KIF1BPQ96EK5 621 aa18.84■□□□□ 0.61
CPSF1-210ENST00000532935 FAM163AQ96GL9 167 aaPredicted RBP18.84■□□□□ 0.61
CPSF1-210ENST00000532935 BEGAINQ9BUH8 593 aa18.84■□□□□ 0.61
CPSF1-210ENST00000532935 IL1RAPL2Q9NP60 686 aa18.84■□□□□ 0.61
CPSF1-210ENST00000532935 SNRKQ9NRH2 765 aa18.84■□□□□ 0.61
CPSF1-210ENST00000532935 LAMB1P07942 1786 aa18.83■□□□□ 0.61
CPSF1-210ENST00000532935 RAB11FIP3O75154 756 aa18.83■□□□□ 0.6
CPSF1-210ENST00000532935 CTCFP49711 727 aaPredicted RBP18.83■□□□□ 0.6
CPSF1-210ENST00000532935 KIF23Q02241 960 aaPredicted RBP18.83■□□□□ 0.6
CPSF1-210ENST00000532935 ZNF384Q8TF68 577 aa18.83■□□□□ 0.6
CPSF1-210ENST00000532935 USP40Q9NVE5 1235 aa18.83■□□□□ 0.6
CPSF1-210ENST00000532935 MROH7-TTC4A0A0A0MT08 1334 aa18.82■□□□□ 0.6
CPSF1-210ENST00000532935 DOCK2Q92608 1830 aa18.82■□□□□ 0.6
CPSF1-210ENST00000532935 USP2O75604 605 aaPredicted RBP18.82■□□□□ 0.6
CPSF1-210ENST00000532935 IREB2P48200 963 aaKnown RBP18.82■□□□□ 0.6
CPSF1-210ENST00000532935 CLASRPQ8N2M8 674 aaKnown RBP18.82■□□□□ 0.6
CPSF1-210ENST00000532935 NSUN4Q96CB9 384 aaKnown RBP18.82■□□□□ 0.6
CPSF1-210ENST00000532935 RAI14Q9P0K7 980 aa18.82■□□□□ 0.6
CPSF1-210ENST00000532935 LRP2BPQ9P2M1 347 aa18.82■□□□□ 0.6
CPSF1-210ENST00000532935 RPAP1Q9BWH6 1393 aaPredicted RBP18.81■□□□□ 0.6
CPSF1-210ENST00000532935 CYP2E1P05181 493 aaPredicted RBP18.81■□□□□ 0.6
CPSF1-210ENST00000532935 ZAP70P43403 619 aa18.81■□□□□ 0.6
CPSF1-210ENST00000532935 GSTO1P78417 241 aa18.81■□□□□ 0.6
CPSF1-210ENST00000532935 NFIAQ12857 509 aa18.81■□□□□ 0.6
CPSF1-210ENST00000532935 FAM151AQ8WW52 585 aa18.81■□□□□ 0.6
CPSF1-210ENST00000532935 CDK5RAP2Q96SN8 1893 aa18.81■□□□□ 0.6
CPSF1-210ENST00000532935 UNCXA6NJT0 531 aa18.8■□□□□ 0.6
CPSF1-210ENST00000532935 LDHCP07864 332 aa18.8■□□□□ 0.6
CPSF1-210ENST00000532935 HSPA8P11142 646 aaKnown RBP18.8■□□□□ 0.6
CPSF1-210ENST00000532935 BTDP43251 543 aa18.8■□□□□ 0.6
CPSF1-210ENST00000532935 TCP10Q12799 353 aa18.8■□□□□ 0.6
CPSF1-210ENST00000532935 CLMNQ96JQ2 1002 aa18.8■□□□□ 0.6
CPSF1-210ENST00000532935 FAM198AQ9UFP1 575 aa18.8■□□□□ 0.6
CPSF1-210ENST00000532935 GPR75-ASB3A0A0A6YYF3 556 aa18.79■□□□□ 0.6
CPSF1-210ENST00000532935 CA12O43570 354 aa18.79■□□□□ 0.6
CPSF1-210ENST00000532935 COL13A1Q5TAT6 717 aaPredicted RBP18.79■□□□□ 0.6
CPSF1-210ENST00000532935 REM2Q8IYK8 340 aaPredicted RBP18.79■□□□□ 0.6
CPSF1-210ENST00000532935 SLC10A4Q96EP9 437 aa18.79■□□□□ 0.6
CPSF1-210ENST00000532935 CSRNP1Q96S65 589 aa18.79■□□□□ 0.6
CPSF1-210ENST00000532935 RFX7Q2KHR2 1363 aa18.79■□□□□ 0.6
CPSF1-210ENST00000532935 IFIT2P09913 472 aaKnown RBP18.78■□□□□ 0.6
CPSF1-210ENST00000532935 LBX1P52954 281 aa18.78■□□□□ 0.6
CPSF1-210ENST00000532935 MKRN3Q13064 507 aaKnown RBP18.78■□□□□ 0.6
CPSF1-210ENST00000532935 ANKRD13AQ8IZ07 590 aa18.78■□□□□ 0.6
CPSF1-210ENST00000532935 HOOK2Q96ED9 719 aa18.78■□□□□ 0.6
CPSF1-210ENST00000532935 CRBNQ96SW2 442 aa18.78■□□□□ 0.6
CPSF1-210ENST00000532935 IDI2Q9BXS1 227 aa18.78■□□□□ 0.6
CPSF1-210ENST00000532935 BCL11AQ9H165 835 aa18.78■□□□□ 0.6
CPSF1-210ENST00000532935 PIH1D3Q9NQM4 214 aaKnown RBP18.78■□□□□ 0.6
CPSF1-210ENST00000532935 PRDM10Q9NQV6 1147 aa18.78■□□□□ 0.6
CPSF1-210ENST00000532935 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.78■□□□□ 0.6
CPSF1-210ENST00000532935 FOCADQ5VW36 1801 aa18.78■□□□□ 0.6
CPSF1-210ENST00000532935 RGS3P49796 1198 aa18.77■□□□□ 0.6
CPSF1-210ENST00000532935 SPRYD7Q5W111 196 aa18.77■□□□□ 0.6
CPSF1-210ENST00000532935 NAA16Q6N069 864 aaPredicted RBP18.77■□□□□ 0.6
CPSF1-210ENST00000532935 TSKSQ9UJT2 592 aa18.77■□□□□ 0.6
CPSF1-210ENST00000532935 NDUFB9Q9Y6M9 179 aa18.77■□□□□ 0.6
CPSF1-210ENST00000532935 CASP8AP2Q9UKL3 1982 aa18.77■□□□□ 0.59
CPSF1-210ENST00000532935 IGSF3O75054 1194 aa18.76■□□□□ 0.59
CPSF1-210ENST00000532935 ENTPD3O75355 529 aa18.76■□□□□ 0.59
CPSF1-210ENST00000532935 WDHD1O75717 1129 aaPredicted RBP18.76■□□□□ 0.59
CPSF1-210ENST00000532935 CENPBP07199 599 aaPredicted RBP18.76■□□□□ 0.59
CPSF1-210ENST00000532935 RHBDL3P58872 404 aa18.76■□□□□ 0.59
CPSF1-210ENST00000532935 DCAF15Q66K64 600 aa18.76■□□□□ 0.59
CPSF1-210ENST00000532935 ZFPM1Q8IX07 1006 aa18.76■□□□□ 0.59
CPSF1-210ENST00000532935 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.76■□□□□ 0.59
CPSF1-210ENST00000532935 WNK4Q96J92 1243 aa18.76■□□□□ 0.59
CPSF1-210ENST00000532935 LRRCC1Q9C099 1032 aa18.76■□□□□ 0.59
CPSF1-210ENST00000532935 DCTPP1Q9H773 170 aa18.76■□□□□ 0.59
CPSF1-210ENST00000532935 PCDHB15Q9Y5E8 787 aa18.76■□□□□ 0.59
CPSF1-210ENST00000532935 MAP4K4O95819 1239 aaPredicted RBP18.75■□□□□ 0.59
CPSF1-210ENST00000532935 ZBTB48P10074 688 aaPredicted RBP18.75■□□□□ 0.59
CPSF1-210ENST00000532935 MAP3K9P80192 1104 aa18.75■□□□□ 0.59
CPSF1-210ENST00000532935 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.75■□□□□ 0.59
CPSF1-210ENST00000532935 SAGE1Q9NXZ1 904 aa18.75■□□□□ 0.59
CPSF1-210ENST00000532935 MYH7P12883 1935 aa18.74■□□□□ 0.59
CPSF1-210ENST00000532935 PICALMQ13492 652 aa18.74■□□□□ 0.59
CPSF1-210ENST00000532935 VGLL4Q14135 290 aa18.74■□□□□ 0.59
CPSF1-210ENST00000532935 MIGA2Q7L4E1 593 aa18.74■□□□□ 0.59
CPSF1-210ENST00000532935 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.74■□□□□ 0.59
CPSF1-210ENST00000532935 NOL10Q9BSC4 688 aaKnown RBP18.74■□□□□ 0.59
CPSF1-210ENST00000532935 ZNF341Q9BYN7 854 aa18.74■□□□□ 0.59
CPSF1-210ENST00000532935 ANTXR1Q9H6X2 564 aa18.74■□□□□ 0.59
CPSF1-210ENST00000532935 ELP3Q9H9T3 547 aa18.74■□□□□ 0.59
CPSF1-210ENST00000532935 DDX4Q9NQI0 724 aaKnown RBP18.74■□□□□ 0.59
CPSF1-210ENST00000532935 RNF186Q9NXI6 227 aa18.74■□□□□ 0.59
CPSF1-210ENST00000532935 CSADQ9Y600 493 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms