RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 RPAP1Q9BWH6 1393 aaPredicted RBP23.45■■□□□ 1.34
SSH3-209ENST00000532600 NOM1Q5C9Z4 860 aaKnown RBP23.45■■□□□ 1.34
SSH3-209ENST00000532600 OPTNQ96CV9 577 aa23.45■■□□□ 1.34
SSH3-209ENST00000532600 TMOD2Q9NZR1 351 aa23.45■■□□□ 1.34
SSH3-209ENST00000532600 AKAP2Q9Y2D5 859 aa23.45■■□□□ 1.34
SSH3-209ENST00000532600 MYH2Q9UKX2 1941 aa23.45■■□□□ 1.34
SSH3-209ENST00000532600 TESPA1A2RU30 521 aaPredicted RBP23.44■■□□□ 1.34
SSH3-209ENST00000532600 ZBTB7BO15156 539 aaPredicted RBP23.44■■□□□ 1.34
SSH3-209ENST00000532600 MAP3K9P80192 1104 aa23.44■■□□□ 1.34
SSH3-209ENST00000532600 CTU1Q7Z7A3 348 aaKnown RBP23.44■■□□□ 1.34
SSH3-209ENST00000532600 SSH3Q8TE77 659 aa23.44■■□□□ 1.34
SSH3-209ENST00000532600 ZNF384Q8TF68 577 aa23.44■■□□□ 1.34
SSH3-209ENST00000532600 MS4A4AQ96JQ5 239 aa23.44■■□□□ 1.34
SSH3-209ENST00000532600 FAM198AQ9UFP1 575 aa23.44■■□□□ 1.34
SSH3-209ENST00000532600 GAKO14976 1311 aa23.43■■□□□ 1.34
SSH3-209ENST00000532600 INHBEP58166 350 aa23.43■■□□□ 1.34
SSH3-209ENST00000532600 ATP8B2P98198 1209 aa23.43■■□□□ 1.34
SSH3-209ENST00000532600 PI16Q6UXB8 463 aa23.43■■□□□ 1.34
SSH3-209ENST00000532600 ZFPM1Q8IX07 1006 aa23.43■■□□□ 1.34
SSH3-209ENST00000532600 NEUROD6Q96NK8 337 aa23.43■■□□□ 1.34
SSH3-209ENST00000532600 SNCAIPQ9Y6H5 919 aa23.43■■□□□ 1.34
SSH3-209ENST00000532600 RFX7Q2KHR2 1363 aa23.42■■□□□ 1.34
SSH3-209ENST00000532600 MVPQ14764 893 aaKnown RBP23.42■■□□□ 1.34
SSH3-209ENST00000532600 FAM151AQ8WW52 585 aa23.42■■□□□ 1.34
SSH3-209ENST00000532600 HMG20BQ9P0W2 317 aa23.42■■□□□ 1.34
SSH3-209ENST00000532600 TCP10Q12799 353 aa23.41■■□□□ 1.34
SSH3-209ENST00000532600 G3BP1Q13283 466 aaKnown RBP eCLIP23.41■■□□□ 1.34
SSH3-209ENST00000532600 ITPRIPQ8IWB1 547 aa23.41■■□□□ 1.34
SSH3-209ENST00000532600 ZKSCAN4Q969J2 545 aaPredicted RBP23.41■■□□□ 1.34
SSH3-209ENST00000532600 USP40Q9NVE5 1235 aa23.41■■□□□ 1.34
SSH3-209ENST00000532600 ALDH1A1P00352 501 aa23.4■■□□□ 1.34
SSH3-209ENST00000532600 MIGA2Q7L4E1 593 aa23.4■■□□□ 1.34
SSH3-209ENST00000532600 FTSJ3Q8IY81 847 aaKnown RBP23.4■■□□□ 1.34
SSH3-209ENST00000532600 PANK1Q8TE04 598 aa23.4■■□□□ 1.34
SSH3-209ENST00000532600 ABCF2Q9UG63 623 aa23.4■■□□□ 1.34
SSH3-209ENST00000532600 ARID4AP29374 1257 aaPredicted RBP23.39■■□□□ 1.33
SSH3-209ENST00000532600 ZGPATQ8N5A5 531 aaKnown RBP23.39■■□□□ 1.33
SSH3-209ENST00000532600 BRI3BPQ8WY22 251 aa23.39■■□□□ 1.33
SSH3-209ENST00000532600 WRNIP1Q96S55 665 aa23.39■■□□□ 1.33
SSH3-209ENST00000532600 ATRNL1Q5VV63 1379 aa23.39■■□□□ 1.33
SSH3-209ENST00000532600 SPDYE5A6NIY4 337 aa23.38■■□□□ 1.33
SSH3-209ENST00000532600 FKTNO75072 461 aa23.38■■□□□ 1.33
SSH3-209ENST00000532600 MCAMP43121 646 aa23.38■■□□□ 1.33
SSH3-209ENST00000532600 RGS19P49795 217 aa23.38■■□□□ 1.33
SSH3-209ENST00000532600 TBC1D9Q6ZT07 1266 aa23.38■■□□□ 1.33
SSH3-209ENST00000532600 SPATA5Q8NB90 893 aa23.38■■□□□ 1.33
SSH3-209ENST00000532600 OTUD5Q96G74 571 aa23.38■■□□□ 1.33
SSH3-209ENST00000532600 FAM163AQ96GL9 167 aaPredicted RBP23.38■■□□□ 1.33
SSH3-209ENST00000532600 CSADQ9Y600 493 aa23.38■■□□□ 1.33
SSH3-209ENST00000532600 INPP5BP32019 993 aa23.37■■□□□ 1.33
SSH3-209ENST00000532600 MECOMQ03112 1051 aa23.37■■□□□ 1.33
SSH3-209ENST00000532600 CRHR2Q13324 411 aa23.37■■□□□ 1.33
SSH3-209ENST00000532600 SH3BP5LQ7L8J4 393 aa23.37■■□□□ 1.33
SSH3-209ENST00000532600 IDI2Q9BXS1 227 aa23.37■■□□□ 1.33
SSH3-209ENST00000532600 ZNF112Q9UJU3 913 aa23.37■■□□□ 1.33
SSH3-209ENST00000532600 NOP58Q9Y2X3 529 aaKnown RBP23.37■■□□□ 1.33
SSH3-209ENST00000532600 CAP1Q01518 475 aa23.36■■□□□ 1.33
SSH3-209ENST00000532600 TNNI3KQ59H18 835 aa23.36■■□□□ 1.33
SSH3-209ENST00000532600 DZIP1Q86YF9 867 aaKnown RBP23.36■■□□□ 1.33
SSH3-209ENST00000532600 DBNDD2Q9BQY9 259 aa23.36■■□□□ 1.33
SSH3-209ENST00000532600 ZNF341Q9BYN7 854 aa23.36■■□□□ 1.33
SSH3-209ENST00000532600 GPR108Q9NPR9 543 aa23.36■■□□□ 1.33
SSH3-209ENST00000532600 DDX4Q9NQI0 724 aaKnown RBP23.36■■□□□ 1.33
SSH3-209ENST00000532600 FPGT-TNNI3KV9GXZ4 949 aa23.36■■□□□ 1.33
SSH3-209ENST00000532600 DOCK2Q92608 1830 aa23.36■■□□□ 1.33
SSH3-209ENST00000532600 MROH7-TTC4A0A0A0MT08 1334 aa23.35■■□□□ 1.33
SSH3-209ENST00000532600 SURF6O75683 361 aaKnown RBP23.35■■□□□ 1.33
SSH3-209ENST00000532600 WDHD1O75717 1129 aaPredicted RBP23.35■■□□□ 1.33
SSH3-209ENST00000532600 SLURP2P0DP57 97 aa23.35■■□□□ 1.33
SSH3-209ENST00000532600 RGS3P49796 1198 aa23.35■■□□□ 1.33
SSH3-209ENST00000532600 DCAF15Q66K64 600 aa23.35■■□□□ 1.33
SSH3-209ENST00000532600 HOOK2Q96ED9 719 aa23.35■■□□□ 1.33
SSH3-209ENST00000532600 HPS5Q9UPZ3 1129 aa23.35■■□□□ 1.33
SSH3-209ENST00000532600 AK9Q5TCS8 1911 aa23.35■■□□□ 1.33
SSH3-209ENST00000532600 CCL15-CCL14A0A0B4J2E2 113 aa23.34■■□□□ 1.33
SSH3-209ENST00000532600 BTDP43251 543 aa23.34■■□□□ 1.33
SSH3-209ENST00000532600 GTF2A2P52657 109 aa23.34■■□□□ 1.33
SSH3-209ENST00000532600 RHBDL3P58872 404 aa23.34■■□□□ 1.33
SSH3-209ENST00000532600 CCL15Q16663 113 aa23.34■■□□□ 1.33
SSH3-209ENST00000532600 GORABQ5T7V8 394 aa23.34■■□□□ 1.33
SSH3-209ENST00000532600 SPTY2D1Q68D10 685 aaPredicted RBP23.34■■□□□ 1.33
SSH3-209ENST00000532600 CEP85Q6P2H3 762 aa23.34■■□□□ 1.33
SSH3-209ENST00000532600 ERICH6Q7L0X2 663 aa23.34■■□□□ 1.33
SSH3-209ENST00000532600 ERO1BQ86YB8 467 aa23.34■■□□□ 1.33
SSH3-209ENST00000532600 FAM43AQ8N2R8 423 aa23.34■■□□□ 1.33
SSH3-209ENST00000532600 NSUN4Q96CB9 384 aaKnown RBP23.34■■□□□ 1.33
SSH3-209ENST00000532600 RCAN3Q9UKA8 241 aa23.34■■□□□ 1.33
SSH3-209ENST00000532600 GPR75-ASB3A0A0A6YYF3 556 aa23.33■■□□□ 1.33
SSH3-209ENST00000532600 IRF6O14896 467 aa23.33■■□□□ 1.33
SSH3-209ENST00000532600 ENTPD3O75355 529 aa23.32■■□□□ 1.32
SSH3-209ENST00000532600 PPIL2Q13356 520 aa23.32■■□□□ 1.32
SSH3-209ENST00000532600 PKN2Q16513 984 aaKnown RBP23.32■■□□□ 1.32
SSH3-209ENST00000532600 OTUD7BQ6GQQ9 843 aa23.32■■□□□ 1.32
SSH3-209ENST00000532600 TLR7Q9NYK1 1049 aaKnown RBP23.32■■□□□ 1.32
SSH3-209ENST00000532600 MYO5AQ9Y4I1 1855 aaKnown RBP23.31■■□□□ 1.32
SSH3-209ENST00000532600 DDTLA6NHG4 134 aaPredicted RBP23.31■■□□□ 1.32
SSH3-209ENST00000532600 PHF20L1A8MW92 1017 aa23.31■■□□□ 1.32
SSH3-209ENST00000532600 UQCRFS1P1P0C7P4 283 aa23.31■■□□□ 1.32
SSH3-209ENST00000532600 SNRKQ9NRH2 765 aa23.31■■□□□ 1.32
SSH3-209ENST00000532600 MAP3K10Q02779 954 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms