RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-215	ENST00000531558	FAM83A	Q86UY5	434 aa		31.48	■■■□□ 2.63
PICALM-215	ENST00000531558	USP40	Q9NVE5	1235 aa		31.48	■■■□□ 2.63
PICALM-215	ENST00000531558	MAST2	Q6P0Q8	1798 aa		31.48	■■■□□ 2.63
PICALM-215	ENST00000531558	LDHC	P07864	332 aa		31.47	■■■□□ 2.63
PICALM-215	ENST00000531558	BTD	P43251	543 aa		31.47	■■■□□ 2.63
PICALM-215	ENST00000531558	SUPT20HL1	Q3ZLR7	823 aa		31.47	■■■□□ 2.63
PICALM-215	ENST00000531558	NBPF12	Q5TAG4	269 aa	Predicted RBP	31.47	■■■□□ 2.63
PICALM-215	ENST00000531558	CAPNS2	Q96L46	248 aa		31.47	■■■□□ 2.63
PICALM-215	ENST00000531558	TEPSIN	Q96N21	525 aa		31.47	■■■□□ 2.63
PICALM-215	ENST00000531558	TMEM39B	Q9GZU3	492 aa		31.47	■■■□□ 2.63
PICALM-215	ENST00000531558	GPR75-ASB3	A0A0A6YYF3	556 aa		31.46	■■■□□ 2.63
PICALM-215	ENST00000531558	ECE1	P42892	770 aa		31.46	■■■□□ 2.63
PICALM-215	ENST00000531558	TTLL12	Q14166	644 aa	Predicted RBP	31.46	■■■□□ 2.63
PICALM-215	ENST00000531558	MOB2	Q70IA6	237 aa		31.46	■■■□□ 2.63
PICALM-215	ENST00000531558	WDR33	Q9C0J8	1336 aa	Known RBP	31.46	■■■□□ 2.63
PICALM-215	ENST00000531558	ATP5J	P18859	108 aa		31.45	■■■□□ 2.63
PICALM-215	ENST00000531558	NAA16	Q6N069	864 aa	Predicted RBP	31.45	■■■□□ 2.63
PICALM-215	ENST00000531558	CDAN1	Q8IWY9	1227 aa		31.45	■■■□□ 2.63
PICALM-215	ENST00000531558	ANTXR1	Q9H6X2	564 aa		31.45	■■■□□ 2.63
PICALM-215	ENST00000531558	PCNT	O95613	3336 aa		31.45	■■■□□ 2.62
PICALM-215	ENST00000531558	IRX6	P78412	446 aa	Predicted RBP	31.44	■■■□□ 2.62
PICALM-215	ENST00000531558	NFIA	Q12857	509 aa		31.44	■■■□□ 2.62
PICALM-215	ENST00000531558	GCC1	Q96CN9	775 aa		31.44	■■■□□ 2.62
PICALM-215	ENST00000531558	RFX7	Q2KHR2	1363 aa		31.43	■■■□□ 2.62
PICALM-215	ENST00000531558	RPAP1	Q9BWH6	1393 aa	Predicted RBP	31.43	■■■□□ 2.62
PICALM-215	ENST00000531558	IDH1	O75874	414 aa	Known RBP	31.43	■■■□□ 2.62
PICALM-215	ENST00000531558	GRM1	Q13255	1194 aa		31.43	■■■□□ 2.62
PICALM-215	ENST00000531558	PRKG1	Q13976	671 aa		31.43	■■■□□ 2.62
PICALM-215	ENST00000531558	RGMB	Q6NW40	437 aa		31.43	■■■□□ 2.62
PICALM-215	ENST00000531558	ARMC9	Q7Z3E5	817 aa		31.43	■■■□□ 2.62
PICALM-215	ENST00000531558	DNAJC2	Q99543	621 aa	Known RBP	31.43	■■■□□ 2.62
PICALM-215	ENST00000531558	UBE2Q2L	H0YL09	131 aa		31.42	■■■□□ 2.62
PICALM-215	ENST00000531558	TTF1	Q15361	905 aa	Predicted RBP	31.42	■■■□□ 2.62
PICALM-215	ENST00000531558	FAM198A	Q9UFP1	575 aa		31.42	■■■□□ 2.62
PICALM-215	ENST00000531558	PPP1R12B	O60237	982 aa	Predicted RBP	31.41	■■■□□ 2.62
PICALM-215	ENST00000531558	RHBDL3	P58872	404 aa		31.41	■■■□□ 2.62
PICALM-215	ENST00000531558	FAM151A	Q8WW52	585 aa		31.41	■■■□□ 2.62
PICALM-215	ENST00000531558	IDI2	Q9BXS1	227 aa		31.41	■■■□□ 2.62
PICALM-215	ENST00000531558	BOLA2	Q9H3K6	86 aa		31.41	■■■□□ 2.62
PICALM-215	ENST00000531558	RWDD1	Q9H446	243 aa	Predicted RBP	31.41	■■■□□ 2.62
PICALM-215	ENST00000531558	ECHDC1	Q9NTX5	307 aa		31.41	■■■□□ 2.62
PICALM-215	ENST00000531558	ANGEL1	Q9UNK9	670 aa	Known RBP	31.41	■■■□□ 2.62
PICALM-215	ENST00000531558	FZD1	Q9UP38	647 aa		31.41	■■■□□ 2.62
PICALM-215	ENST00000531558	THSD7B	Q9C0I4	1608 aa		31.4	■■■□□ 2.62
PICALM-215	ENST00000531558	GOLIM4	O00461	696 aa		31.4	■■■□□ 2.62
PICALM-215	ENST00000531558	MAP3K12	Q12852	859 aa		31.4	■■■□□ 2.62
PICALM-215	ENST00000531558	MAP3K11	Q16584	847 aa		31.4	■■■□□ 2.62
PICALM-215	ENST00000531558	GPATCH3	Q96I76	525 aa		31.4	■■■□□ 2.62
PICALM-215	ENST00000531558	WDHD1	O75717	1129 aa	Predicted RBP	31.39	■■■□□ 2.62
PICALM-215	ENST00000531558	MAP4K4	O95819	1239 aa	Predicted RBP	31.39	■■■□□ 2.62
PICALM-215	ENST00000531558	ZNF157	P51786	506 aa	Predicted RBP	31.39	■■■□□ 2.62
PICALM-215	ENST00000531558	TCP10	Q12799	353 aa		31.39	■■■□□ 2.62
PICALM-215	ENST00000531558	ADGRA1	Q86SQ6	560 aa		31.39	■■■□□ 2.62
PICALM-215	ENST00000531558	HAUS7	Q99871	368 aa		31.39	■■■□□ 2.62
PICALM-215	ENST00000531558	NOL10	Q9BSC4	688 aa	Known RBP	31.39	■■■□□ 2.62
PICALM-215	ENST00000531558	DOCK2	Q92608	1830 aa		31.38	■■■□□ 2.61
PICALM-215	ENST00000531558	MYO5A	Q9Y4I1	1855 aa	Known RBP	31.38	■■■□□ 2.61
PICALM-215	ENST00000531558	RGS3	P49796	1198 aa		31.38	■■■□□ 2.61
PICALM-215	ENST00000531558	TMED8	Q6PL24	325 aa	Predicted RBP	31.38	■■■□□ 2.61
PICALM-215	ENST00000531558	CCDC102A	Q96A19	550 aa		31.38	■■■□□ 2.61
PICALM-215	ENST00000531558	PAG1	Q9NWQ8	432 aa		31.38	■■■□□ 2.61
PICALM-215	ENST00000531558	ENTPD3	O75355	529 aa		31.37	■■■□□ 2.61
PICALM-215	ENST00000531558	LDLRAD1	Q5T700	205 aa		31.37	■■■□□ 2.61
PICALM-215	ENST00000531558	ANKRD45	Q5TZF3	282 aa		31.37	■■■□□ 2.61
PICALM-215	ENST00000531558	MAGEB6	Q8N7X4	407 aa		31.37	■■■□□ 2.61
PICALM-215	ENST00000531558	EDC3	Q96F86	508 aa	Known RBP	31.37	■■■□□ 2.61
PICALM-215	ENST00000531558	FAM155A	B1AL88	458 aa	Predicted RBP	31.36	■■■□□ 2.61
PICALM-215	ENST00000531558	AOC2	O75106	756 aa		31.36	■■■□□ 2.61
PICALM-215	ENST00000531558	BAG3	O95817	575 aa		31.36	■■■□□ 2.61
PICALM-215	ENST00000531558	CYP7A1	P22680	504 aa		31.36	■■■□□ 2.61
PICALM-215	ENST00000531558	AATF	Q9NY61	560 aa	Known RBP eCLIP	31.36	■■■□□ 2.61
PICALM-215	ENST00000531558	ZBTB47	Q9UFB7	747 aa	Predicted RBP	31.36	■■■□□ 2.61
PICALM-215	ENST00000531558	USP2	O75604	605 aa	Predicted RBP	31.35	■■■□□ 2.61
PICALM-215	ENST00000531558	IGHD	P01880	384 aa		31.35	■■■□□ 2.61
PICALM-215	ENST00000531558	SLC10A3	P09131	477 aa		31.35	■■■□□ 2.61
PICALM-215	ENST00000531558	IREB2	P48200	963 aa	Known RBP	31.35	■■■□□ 2.61
PICALM-215	ENST00000531558	PPP4C	P60510	307 aa		31.35	■■■□□ 2.61
PICALM-215	ENST00000531558	RASAL3	Q86YV0	1011 aa		31.35	■■■□□ 2.61
PICALM-215	ENST00000531558	ZFPM1	Q8IX07	1006 aa		31.35	■■■□□ 2.61
PICALM-215	ENST00000531558	SMC5	Q8IY18	1101 aa		31.35	■■■□□ 2.61
PICALM-215	ENST00000531558	HOOK2	Q96ED9	719 aa		31.35	■■■□□ 2.61
PICALM-215	ENST00000531558	DDX4	Q9NQI0	724 aa	Known RBP	31.35	■■■□□ 2.61
PICALM-215	ENST00000531558	MAP2K2	P36507	400 aa		31.34	■■■□□ 2.61
PICALM-215	ENST00000531558	NOG	Q13253	232 aa		31.34	■■■□□ 2.61
PICALM-215	ENST00000531558	TSHZ3	Q63HK5	1081 aa		31.34	■■■□□ 2.61
PICALM-215	ENST00000531558	OTUD7A	Q8TE49	926 aa	Predicted RBP	31.34	■■■□□ 2.61
PICALM-215	ENST00000531558	NPM3	O75607	178 aa	Known RBP	31.33	■■■□□ 2.61
PICALM-215	ENST00000531558	PLCG2	P16885	1265 aa		31.33	■■■□□ 2.61
PICALM-215	ENST00000531558	PICALM	Q13492	652 aa		31.33	■■■□□ 2.61
PICALM-215	ENST00000531558	TEX11	Q8IYF3	940 aa		31.33	■■■□□ 2.61
PICALM-215	ENST00000531558	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	31.33	■■■□□ 2.61
PICALM-215	ENST00000531558	TTC41P	Q6P2S7	1318 aa		31.32	■■■□□ 2.6
PICALM-215	ENST00000531558	UNCX	A6NJT0	531 aa		31.32	■■■□□ 2.6
PICALM-215	ENST00000531558	PDE6A	P16499	860 aa		31.32	■■■□□ 2.6
PICALM-215	ENST00000531558	SLC9C2	Q5TAH2	1124 aa		31.31	■■■□□ 2.6
PICALM-215	ENST00000531558	SALL3	Q9BXA9	1300 aa		31.3	■■■□□ 2.6
PICALM-215	ENST00000531558	MX1	P20591	662 aa		31.3	■■■□□ 2.6
PICALM-215	ENST00000531558	DCAF15	Q66K64	600 aa		31.3	■■■□□ 2.6
PICALM-215	ENST00000531558	MIGA1	Q8NAN2	632 aa		31.3	■■■□□ 2.6
PICALM-215	ENST00000531558	SH3BP5L	Q7L8J4	393 aa		31.29	■■■□□ 2.6

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