RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 SNCAIPQ9Y6H5 919 aa16.55■□□□□ 0.24
AMBRA1-210ENST00000531542 CCL15-CCL14A0A0B4J2E2 113 aa16.54■□□□□ 0.24
AMBRA1-210ENST00000531542 PHKA1P46020 1223 aa16.54■□□□□ 0.24
AMBRA1-210ENST00000531542 SP3Q02447 781 aa16.54■□□□□ 0.24
AMBRA1-210ENST00000531542 CCL15Q16663 113 aa16.54■□□□□ 0.24
AMBRA1-210ENST00000531542 CNKSR2Q8WXI2 1034 aa16.54■□□□□ 0.24
AMBRA1-210ENST00000531542 FAM163AQ96GL9 167 aaPredicted RBP16.54■□□□□ 0.24
AMBRA1-210ENST00000531542 WRNIP1Q96S55 665 aa16.54■□□□□ 0.24
AMBRA1-210ENST00000531542 ZNF341Q9BYN7 854 aa16.54■□□□□ 0.24
AMBRA1-210ENST00000531542 TRIM17Q9Y577 477 aa16.54■□□□□ 0.24
AMBRA1-210ENST00000531542 SRGAP3O43295 1099 aa16.53■□□□□ 0.24
AMBRA1-210ENST00000531542 CETPP11597 493 aa16.53■□□□□ 0.24
AMBRA1-210ENST00000531542 TRIM27P14373 513 aa16.53■□□□□ 0.24
AMBRA1-210ENST00000531542 PPATQ06203 517 aa16.53■□□□□ 0.24
AMBRA1-210ENST00000531542 PPIL2Q13356 520 aa16.53■□□□□ 0.24
AMBRA1-210ENST00000531542 ARHGEF6Q15052 776 aa16.53■□□□□ 0.24
AMBRA1-210ENST00000531542 DIXDC1Q155Q3 683 aa16.53■□□□□ 0.24
AMBRA1-210ENST00000531542 ATF7IPQ6VMQ6 1270 aa16.53■□□□□ 0.24
AMBRA1-210ENST00000531542 OTUD5Q96G74 571 aa16.53■□□□□ 0.24
AMBRA1-210ENST00000531542 ZFYVE28Q9HCC9 887 aa16.53■□□□□ 0.24
AMBRA1-210ENST00000531542 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.53■□□□□ 0.24
AMBRA1-210ENST00000531542 PTPN22Q9Y2R2 807 aa16.53■□□□□ 0.24
AMBRA1-210ENST00000531542 GAKO14976 1311 aa16.52■□□□□ 0.24
AMBRA1-210ENST00000531542 OTOFQ9HC10 1997 aa16.52■□□□□ 0.24
AMBRA1-210ENST00000531542 IRF6O14896 467 aa16.52■□□□□ 0.24
AMBRA1-210ENST00000531542 WDHD1O75717 1129 aaPredicted RBP16.52■□□□□ 0.24
AMBRA1-210ENST00000531542 SNAPC2Q13487 334 aa16.52■□□□□ 0.24
AMBRA1-210ENST00000531542 SLF2Q8IX21 1173 aa16.52■□□□□ 0.24
AMBRA1-210ENST00000531542 ZKSCAN4Q969J2 545 aaPredicted RBP16.52■□□□□ 0.24
AMBRA1-210ENST00000531542 IDI2Q9BXS1 227 aa16.52■□□□□ 0.24
AMBRA1-210ENST00000531542 TNRC18O15417 2968 aaPredicted RBP16.52■□□□□ 0.23
AMBRA1-210ENST00000531542 ENTPD3O75355 529 aa16.51■□□□□ 0.23
AMBRA1-210ENST00000531542 GNAI2P04899 355 aa16.51■□□□□ 0.23
AMBRA1-210ENST00000531542 TIMM10P62072 90 aa16.51■□□□□ 0.23
AMBRA1-210ENST00000531542 RASGRF1Q13972 1273 aa16.51■□□□□ 0.23
AMBRA1-210ENST00000531542 MVPQ14764 893 aaKnown RBP16.51■□□□□ 0.23
AMBRA1-210ENST00000531542 NOL9Q5SY16 702 aaKnown RBP16.51■□□□□ 0.23
AMBRA1-210ENST00000531542 SPTY2D1Q68D10 685 aaPredicted RBP16.51■□□□□ 0.23
AMBRA1-210ENST00000531542 FAM43AQ8N2R8 423 aa16.51■□□□□ 0.23
AMBRA1-210ENST00000531542 EFCC1Q9HA90 598 aa16.51■□□□□ 0.23
AMBRA1-210ENST00000531542 USP40Q9NVE5 1235 aa16.51■□□□□ 0.23
AMBRA1-210ENST00000531542 FAM198AQ9UFP1 575 aa16.51■□□□□ 0.23
AMBRA1-210ENST00000531542 PDE4DIPQ5VU43 2346 aa16.51■□□□□ 0.23
AMBRA1-210ENST00000531542 A0A1B0GUL7 405 aa16.5■□□□□ 0.23
AMBRA1-210ENST00000531542 TLR2O60603 784 aa16.5■□□□□ 0.23
AMBRA1-210ENST00000531542 ADORA1P30542 326 aa16.5■□□□□ 0.23
AMBRA1-210ENST00000531542 MAP3K10Q02779 954 aa16.5■□□□□ 0.23
AMBRA1-210ENST00000531542 TFCP2Q12800 502 aa16.5■□□□□ 0.23
AMBRA1-210ENST00000531542 NFIAQ12857 509 aa16.5■□□□□ 0.23
AMBRA1-210ENST00000531542 TAF1CQ15572 869 aaPredicted RBP16.5■□□□□ 0.23
AMBRA1-210ENST00000531542 CD99L2Q8TCZ2 262 aa16.5■□□□□ 0.23
AMBRA1-210ENST00000531542 ARMC5Q96C12 935 aa16.5■□□□□ 0.23
AMBRA1-210ENST00000531542 XAGE2Q96GT9 111 aa16.5■□□□□ 0.23
AMBRA1-210ENST00000531542 KCNH4Q9UQ05 1017 aa16.5■□□□□ 0.23
AMBRA1-210ENST00000531542 HTTP42858 3142 aa16.5■□□□□ 0.23
AMBRA1-210ENST00000531542 NPM3O75607 178 aaKnown RBP16.49■□□□□ 0.23
AMBRA1-210ENST00000531542 BCAR3O75815 825 aa16.49■□□□□ 0.23
AMBRA1-210ENST00000531542 MAP4K4O95819 1239 aaPredicted RBP16.49■□□□□ 0.23
AMBRA1-210ENST00000531542 MIGA2Q7L4E1 593 aa16.49■□□□□ 0.23
AMBRA1-210ENST00000531542 RFX7Q2KHR2 1363 aa16.49■□□□□ 0.23
AMBRA1-210ENST00000531542 BTBD19C9JJ37 291 aa16.48■□□□□ 0.23
AMBRA1-210ENST00000531542 GNRH1P01148 92 aa16.48■□□□□ 0.23
AMBRA1-210ENST00000531542 INPP5BP32019 993 aa16.48■□□□□ 0.23
AMBRA1-210ENST00000531542 TCP10Q12799 353 aa16.48■□□□□ 0.23
AMBRA1-210ENST00000531542 ATRNL1Q5VV63 1379 aa16.48■□□□□ 0.23
AMBRA1-210ENST00000531542 CAP1Q01518 475 aa16.47■□□□□ 0.23
AMBRA1-210ENST00000531542 ZKSCAN2Q63HK3 967 aa16.47■□□□□ 0.23
AMBRA1-210ENST00000531542 ANKRD23Q86SG2 305 aa16.47■□□□□ 0.23
AMBRA1-210ENST00000531542 DZIP1Q86YF9 867 aaKnown RBP16.47■□□□□ 0.23
AMBRA1-210ENST00000531542 GPR75-ASB3A0A0A6YYF3 556 aa16.46■□□□□ 0.23
AMBRA1-210ENST00000531542 PHF20L1A8MW92 1017 aa16.46■□□□□ 0.23
AMBRA1-210ENST00000531542 CXCL11O14625 94 aa16.46■□□□□ 0.23
AMBRA1-210ENST00000531542 IGSF3O75054 1194 aa16.46■□□□□ 0.23
AMBRA1-210ENST00000531542 SLC34A2O95436 690 aa16.46■□□□□ 0.23
AMBRA1-210ENST00000531542 ARID4AP29374 1257 aaPredicted RBP16.46■□□□□ 0.23
AMBRA1-210ENST00000531542 FRAT1Q92837 279 aaPredicted RBP16.46■□□□□ 0.23
AMBRA1-210ENST00000531542 GPR108Q9NPR9 543 aa16.46■□□□□ 0.23
AMBRA1-210ENST00000531542 HMG20BQ9P0W2 317 aa16.46■□□□□ 0.23
AMBRA1-210ENST00000531542 ABCF2Q9UG63 623 aa16.46■□□□□ 0.23
AMBRA1-210ENST00000531542 MYH13Q9UKX3 1938 aa16.45■□□□□ 0.22
AMBRA1-210ENST00000531542 PNMA6EA0A0J9YXQ4 647 aa16.45■□□□□ 0.22
AMBRA1-210ENST00000531542 RGS3P49796 1198 aa16.45■□□□□ 0.22
AMBRA1-210ENST00000531542 MECOMQ03112 1051 aa16.45■□□□□ 0.22
AMBRA1-210ENST00000531542 G3BP1Q13283 466 aaKnown RBP eCLIP16.45■□□□□ 0.22
AMBRA1-210ENST00000531542 MOGSQ13724 837 aa16.45■□□□□ 0.22
AMBRA1-210ENST00000531542 POLA2Q14181 598 aa16.45■□□□□ 0.22
AMBRA1-210ENST00000531542 PRPF38BQ5VTL8 546 aaKnown RBP16.45■□□□□ 0.22
AMBRA1-210ENST00000531542 ERICH6Q7L0X2 663 aa16.45■□□□□ 0.22
AMBRA1-210ENST00000531542 ZFPM1Q8IX07 1006 aa16.45■□□□□ 0.22
AMBRA1-210ENST00000531542 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.45■□□□□ 0.22
AMBRA1-210ENST00000531542 SPATA5Q8NB90 893 aa16.45■□□□□ 0.22
AMBRA1-210ENST00000531542 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.45■□□□□ 0.22
AMBRA1-210ENST00000531542 MROH7-TTC4A0A0A0MT08 1334 aa16.45■□□□□ 0.22
AMBRA1-210ENST00000531542 TBC1D12O60347 775 aa16.44■□□□□ 0.22
AMBRA1-210ENST00000531542 PRMT2P55345 433 aa16.44■□□□□ 0.22
AMBRA1-210ENST00000531542 GSTO1P78417 241 aa16.44■□□□□ 0.22
AMBRA1-210ENST00000531542 LACTBP83111 547 aaPredicted RBP16.44■□□□□ 0.22
AMBRA1-210ENST00000531542 KIF22Q14807 665 aa16.44■□□□□ 0.22
AMBRA1-210ENST00000531542 C17orf99Q6UX52 265 aa16.44■□□□□ 0.22
AMBRA1-210ENST00000531542 SH3BP5LQ7L8J4 393 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms