RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 SUPT16HQ9Y5B9 1047 aaKnown RBP17.7■□□□□ 0.42
FOXR1-202ENST00000531539 MYH13Q9UKX3 1938 aa17.69■□□□□ 0.42
FOXR1-202ENST00000531539 SMARCA5O60264 1052 aaPredicted RBP17.69■□□□□ 0.42
FOXR1-202ENST00000531539 CYP2E1P05181 493 aaPredicted RBP17.69■□□□□ 0.42
FOXR1-202ENST00000531539 GSTO1P78417 241 aa17.69■□□□□ 0.42
FOXR1-202ENST00000531539 MAP2K1Q02750 393 aaPredicted RBP17.69■□□□□ 0.42
FOXR1-202ENST00000531539 NSUN4Q96CB9 384 aaKnown RBP17.69■□□□□ 0.42
FOXR1-202ENST00000531539 TEPSINQ96N21 525 aa17.69■□□□□ 0.42
FOXR1-202ENST00000531539 ZIC5Q96T25 663 aa17.69■□□□□ 0.42
FOXR1-202ENST00000531539 LRRCC1Q9C099 1032 aa17.69■□□□□ 0.42
FOXR1-202ENST00000531539 DCTPP1Q9H773 170 aa17.69■□□□□ 0.42
FOXR1-202ENST00000531539 WBP1LQ9NX94 342 aa17.69■□□□□ 0.42
FOXR1-202ENST00000531539 NDUFB9Q9Y6M9 179 aa17.69■□□□□ 0.42
FOXR1-202ENST00000531539 ARAP2Q8WZ64 1704 aa17.69■□□□□ 0.42
FOXR1-202ENST00000531539 FAM155AB1AL88 458 aaPredicted RBP17.68■□□□□ 0.42
FOXR1-202ENST00000531539 USP2O75604 605 aaPredicted RBP17.68■□□□□ 0.42
FOXR1-202ENST00000531539 BTDP43251 543 aa17.68■□□□□ 0.42
FOXR1-202ENST00000531539 TCP10Q12799 353 aa17.68■□□□□ 0.42
FOXR1-202ENST00000531539 NOGQ13253 232 aa17.68■□□□□ 0.42
FOXR1-202ENST00000531539 FKBP1CQ5VVH2 108 aa17.68■□□□□ 0.42
FOXR1-202ENST00000531539 CDAN1Q8IWY9 1227 aa17.68■□□□□ 0.42
FOXR1-202ENST00000531539 ZNF384Q8TF68 577 aa17.68■□□□□ 0.42
FOXR1-202ENST00000531539 AIDAQ96BJ3 306 aa17.68■□□□□ 0.42
FOXR1-202ENST00000531539 SLC10A4Q96EP9 437 aa17.68■□□□□ 0.42
FOXR1-202ENST00000531539 PIH1D3Q9NQM4 214 aaKnown RBP17.68■□□□□ 0.42
FOXR1-202ENST00000531539 IREB2P48200 963 aaKnown RBP17.67■□□□□ 0.42
FOXR1-202ENST00000531539 KIF23Q02241 960 aaPredicted RBP17.67■□□□□ 0.42
FOXR1-202ENST00000531539 LDLRAD1Q5T700 205 aa17.67■□□□□ 0.42
FOXR1-202ENST00000531539 FAM83AQ86UY5 434 aa17.67■□□□□ 0.42
FOXR1-202ENST00000531539 FAM151AQ8WW52 585 aa17.67■□□□□ 0.42
FOXR1-202ENST00000531539 BEGAINQ9BUH8 593 aa17.67■□□□□ 0.42
FOXR1-202ENST00000531539 GAKO14976 1311 aa17.67■□□□□ 0.42
FOXR1-202ENST00000531539 GPR75-ASB3A0A0A6YYF3 556 aa17.66■□□□□ 0.42
FOXR1-202ENST00000531539 SLC10A3P09131 477 aa17.66■□□□□ 0.42
FOXR1-202ENST00000531539 NFIAQ12857 509 aa17.66■□□□□ 0.42
FOXR1-202ENST00000531539 NAA16Q6N069 864 aaPredicted RBP17.66■□□□□ 0.42
FOXR1-202ENST00000531539 MROH7-TTC4A0A0A0MT08 1334 aa17.66■□□□□ 0.42
FOXR1-202ENST00000531539 FOXN1O15353 648 aa17.65■□□□□ 0.42
FOXR1-202ENST00000531539 MKRN3Q13064 507 aaKnown RBP17.65■□□□□ 0.42
FOXR1-202ENST00000531539 MAP3K11Q16584 847 aa17.65■□□□□ 0.42
FOXR1-202ENST00000531539 RASAL3Q86YV0 1011 aa17.65■□□□□ 0.42
FOXR1-202ENST00000531539 ZFPM1Q8IX07 1006 aa17.65■□□□□ 0.42
FOXR1-202ENST00000531539 NOL10Q9BSC4 688 aaKnown RBP17.65■□□□□ 0.42
FOXR1-202ENST00000531539 ANTXR1Q9H6X2 564 aa17.65■□□□□ 0.42
FOXR1-202ENST00000531539 FAM198AQ9UFP1 575 aa17.65■□□□□ 0.42
FOXR1-202ENST00000531539 IDH1O75874 414 aaKnown RBP17.64■□□□□ 0.41
FOXR1-202ENST00000531539 RGS3P49796 1198 aa17.64■□□□□ 0.41
FOXR1-202ENST00000531539 MIGA2Q7L4E1 593 aa17.64■□□□□ 0.41
FOXR1-202ENST00000531539 CLMNQ96JQ2 1002 aa17.64■□□□□ 0.41
FOXR1-202ENST00000531539 ECM29Q5VYK3 1845 aa17.63■□□□□ 0.41
FOXR1-202ENST00000531539 PICALMQ13492 652 aa17.63■□□□□ 0.41
FOXR1-202ENST00000531539 EXOC6Q8TAG9 804 aa17.63■□□□□ 0.41
FOXR1-202ENST00000531539 HOOK2Q96ED9 719 aa17.63■□□□□ 0.41
FOXR1-202ENST00000531539 DNAJC2Q99543 621 aaKnown RBP17.63■□□□□ 0.41
FOXR1-202ENST00000531539 IDI2Q9BXS1 227 aa17.63■□□□□ 0.41
FOXR1-202ENST00000531539 BOLA2Q9H3K6 86 aa17.63■□□□□ 0.41
FOXR1-202ENST00000531539 PAPPA2Q9BXP8 1791 aa17.63■□□□□ 0.41
FOXR1-202ENST00000531539 ENTPD3O75355 529 aa17.62■□□□□ 0.41
FOXR1-202ENST00000531539 BAG3O95817 575 aa17.62■□□□□ 0.41
FOXR1-202ENST00000531539 CYP7A1P22680 504 aa17.62■□□□□ 0.41
FOXR1-202ENST00000531539 RHBDL3P58872 404 aa17.62■□□□□ 0.41
FOXR1-202ENST00000531539 MAP3K9P80192 1104 aa17.62■□□□□ 0.41
FOXR1-202ENST00000531539 ZSCAN29Q8IWY8 852 aaPredicted RBP17.62■□□□□ 0.41
FOXR1-202ENST00000531539 ANKRD13AQ8IZ07 590 aa17.62■□□□□ 0.41
FOXR1-202ENST00000531539 CSRNP1Q96S65 589 aa17.62■□□□□ 0.41
FOXR1-202ENST00000531539 MYH2Q9UKX2 1941 aa17.62■□□□□ 0.41
FOXR1-202ENST00000531539 SSC5DA1L4H1 1573 aa17.62■□□□□ 0.41
FOXR1-202ENST00000531539 UNCXA6NJT0 531 aa17.61■□□□□ 0.41
FOXR1-202ENST00000531539 GOLIM4O00461 696 aa17.61■□□□□ 0.41
FOXR1-202ENST00000531539 WDHD1O75717 1129 aaPredicted RBP17.61■□□□□ 0.41
FOXR1-202ENST00000531539 ATP5JP18859 108 aa17.61■□□□□ 0.41
FOXR1-202ENST00000531539 CTCFP49711 727 aaPredicted RBP17.61■□□□□ 0.41
FOXR1-202ENST00000531539 MAP3K12Q12852 859 aa17.61■□□□□ 0.41
FOXR1-202ENST00000531539 TTF1Q15361 905 aaPredicted RBP17.61■□□□□ 0.41
FOXR1-202ENST00000531539 DCAF15Q66K64 600 aa17.61■□□□□ 0.41
FOXR1-202ENST00000531539 SH3RF3Q8TEJ3 882 aaPredicted RBP17.61■□□□□ 0.41
FOXR1-202ENST00000531539 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.61■□□□□ 0.41
FOXR1-202ENST00000531539 ELP3Q9H9T3 547 aa17.61■□□□□ 0.41
FOXR1-202ENST00000531539 DDX4Q9NQI0 724 aaKnown RBP17.61■□□□□ 0.41
FOXR1-202ENST00000531539 AATFQ9NY61 560 aaKnown RBP eCLIP17.61■□□□□ 0.41
FOXR1-202ENST00000531539 IGSF3O75054 1194 aa17.6■□□□□ 0.41
FOXR1-202ENST00000531539 MAP4K4O95819 1239 aaPredicted RBP17.6■□□□□ 0.41
FOXR1-202ENST00000531539 SPRYD7Q5W111 196 aa17.6■□□□□ 0.41
FOXR1-202ENST00000531539 ADGRA1Q86SQ6 560 aa17.6■□□□□ 0.41
FOXR1-202ENST00000531539 TEX11Q8IYF3 940 aa17.6■□□□□ 0.41
FOXR1-202ENST00000531539 MAGEB6Q8N7X4 407 aa17.6■□□□□ 0.41
FOXR1-202ENST00000531539 TSKSQ9UJT2 592 aa17.6■□□□□ 0.41
FOXR1-202ENST00000531539 AKAP11Q9UKA4 1901 aa17.6■□□□□ 0.41
FOXR1-202ENST00000531539 LBX1P52954 281 aa17.59■□□□□ 0.41
FOXR1-202ENST00000531539 PPP4CP60510 307 aa17.59■□□□□ 0.41
FOXR1-202ENST00000531539 DYNLL1P63167 89 aaKnown RBP17.59■□□□□ 0.41
FOXR1-202ENST00000531539 AAMPQ13685 434 aa17.59■□□□□ 0.41
FOXR1-202ENST00000531539 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.59■□□□□ 0.41
FOXR1-202ENST00000531539 REM2Q8IYK8 340 aaPredicted RBP17.59■□□□□ 0.41
FOXR1-202ENST00000531539 EDC3Q96F86 508 aaKnown RBP17.59■□□□□ 0.41
FOXR1-202ENST00000531539 ZNF341Q9BYN7 854 aa17.59■□□□□ 0.41
FOXR1-202ENST00000531539 ZBTB47Q9UFB7 747 aaPredicted RBP17.59■□□□□ 0.41
FOXR1-202ENST00000531539 DDTLA6NHG4 134 aaPredicted RBP17.58■□□□□ 0.4
FOXR1-202ENST00000531539 TRPA1O75762 1119 aa17.58■□□□□ 0.4
FOXR1-202ENST00000531539 PLCG2P16885 1265 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms