RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 PRPF38BQ5VTL8 546 aaKnown RBP15.95■□□□□ 0.14
TM9SF1-211ENST00000531406 CDC42EP5Q6NZY7 148 aa15.95■□□□□ 0.14
TM9SF1-211ENST00000531406 FAM151AQ8WW52 585 aa15.95■□□□□ 0.14
TM9SF1-211ENST00000531406 ZNF341Q9BYN7 854 aa15.95■□□□□ 0.14
TM9SF1-211ENST00000531406 PA2G4Q9UQ80 394 aaKnown RBP15.95■□□□□ 0.14
TM9SF1-211ENST00000531406 RPAP1Q9BWH6 1393 aaPredicted RBP15.95■□□□□ 0.14
TM9SF1-211ENST00000531406 SEMA3EO15041 775 aa15.94■□□□□ 0.14
TM9SF1-211ENST00000531406 LDHBP07195 334 aaKnown RBP15.94■□□□□ 0.14
TM9SF1-211ENST00000531406 PHKA1P46020 1223 aa15.94■□□□□ 0.14
TM9SF1-211ENST00000531406 RARSP54136 660 aaKnown RBP15.94■□□□□ 0.14
TM9SF1-211ENST00000531406 PPIL2Q13356 520 aa15.94■□□□□ 0.14
TM9SF1-211ENST00000531406 SNAPC2Q13487 334 aa15.94■□□□□ 0.14
TM9SF1-211ENST00000531406 MIGA2Q7L4E1 593 aa15.94■□□□□ 0.14
TM9SF1-211ENST00000531406 MEIS3Q99687 375 aa15.94■□□□□ 0.14
TM9SF1-211ENST00000531406 COPRSQ9NQ92 184 aa15.94■□□□□ 0.14
TM9SF1-211ENST00000531406 DENND2AQ9ULE3 1009 aa15.94■□□□□ 0.14
TM9SF1-211ENST00000531406 LAMB1P07942 1786 aa15.94■□□□□ 0.14
TM9SF1-211ENST00000531406 SALL1Q9NSC2 1324 aa15.94■□□□□ 0.14
TM9SF1-211ENST00000531406 BTBD19C9JJ37 291 aa15.93■□□□□ 0.14
TM9SF1-211ENST00000531406 IRF6O14896 467 aa15.93■□□□□ 0.14
TM9SF1-211ENST00000531406 WDHD1O75717 1129 aaPredicted RBP15.93■□□□□ 0.14
TM9SF1-211ENST00000531406 INPP5BP32019 993 aa15.93■□□□□ 0.14
TM9SF1-211ENST00000531406 TCP10Q12799 353 aa15.93■□□□□ 0.14
TM9SF1-211ENST00000531406 NFIAQ12857 509 aa15.93■□□□□ 0.14
TM9SF1-211ENST00000531406 ARHGEF6Q15052 776 aa15.93■□□□□ 0.14
TM9SF1-211ENST00000531406 ARMC5Q96C12 935 aa15.93■□□□□ 0.14
TM9SF1-211ENST00000531406 ZCCHC17Q9NP64 241 aaKnown RBP15.93■□□□□ 0.14
TM9SF1-211ENST00000531406 USP40Q9NVE5 1235 aa15.93■□□□□ 0.14
TM9SF1-211ENST00000531406 OTOFQ9HC10 1997 aa15.93■□□□□ 0.14
TM9SF1-211ENST00000531406 POTEFA5A3E0 1075 aa15.92■□□□□ 0.14
TM9SF1-211ENST00000531406 ZBTB22O15209 634 aa15.92■□□□□ 0.14
TM9SF1-211ENST00000531406 ADORA1P30542 326 aa15.92■□□□□ 0.14
TM9SF1-211ENST00000531406 PPATQ06203 517 aa15.92■□□□□ 0.14
TM9SF1-211ENST00000531406 ARHGAP45Q92619 1136 aa15.92■□□□□ 0.14
TM9SF1-211ENST00000531406 FAM198AQ9UFP1 575 aa15.92■□□□□ 0.14
TM9SF1-211ENST00000531406 ZNF112Q9UJU3 913 aa15.92■□□□□ 0.14
TM9SF1-211ENST00000531406 TLR2O60603 784 aa15.91■□□□□ 0.14
TM9SF1-211ENST00000531406 CCDC102BQ68D86 513 aa15.91■□□□□ 0.14
TM9SF1-211ENST00000531406 HTTP42858 3142 aa15.9■□□□□ 0.14
TM9SF1-211ENST00000531406 GNAI3P08754 354 aa15.9■□□□□ 0.14
TM9SF1-211ENST00000531406 TIMM10P62072 90 aa15.9■□□□□ 0.14
TM9SF1-211ENST00000531406 ZFPM1Q8IX07 1006 aa15.9■□□□□ 0.14
TM9SF1-211ENST00000531406 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.9■□□□□ 0.14
TM9SF1-211ENST00000531406 PDE4DIPQ5VU43 2346 aa15.89■□□□□ 0.13
TM9SF1-211ENST00000531406 SRGAP3O43295 1099 aa15.89■□□□□ 0.13
TM9SF1-211ENST00000531406 RASGRF1Q13972 1273 aa15.89■□□□□ 0.13
TM9SF1-211ENST00000531406 ZGPATQ8N5A5 531 aaKnown RBP15.89■□□□□ 0.13
TM9SF1-211ENST00000531406 KCNH4Q9UQ05 1017 aa15.89■□□□□ 0.13
TM9SF1-211ENST00000531406 PTCH2Q9Y6C5 1203 aa15.89■□□□□ 0.13
TM9SF1-211ENST00000531406 LACTBP83111 547 aaPredicted RBP15.88■□□□□ 0.13
TM9SF1-211ENST00000531406 TFCP2Q12800 502 aa15.88■□□□□ 0.13
TM9SF1-211ENST00000531406 MTX1Q13505 466 aa15.88■□□□□ 0.13
TM9SF1-211ENST00000531406 NOL9Q5SY16 702 aaKnown RBP15.88■□□□□ 0.13
TM9SF1-211ENST00000531406 ANKRD23Q86SG2 305 aa15.88■□□□□ 0.13
TM9SF1-211ENST00000531406 ZNF333Q96JL9 665 aa15.88■□□□□ 0.13
TM9SF1-211ENST00000531406 IDI2Q9BXS1 227 aa15.88■□□□□ 0.13
TM9SF1-211ENST00000531406 ARHGAP39Q9C0H5 1083 aa15.88■□□□□ 0.13
TM9SF1-211ENST00000531406 AKAP2Q9Y2D5 859 aa15.88■□□□□ 0.13
TM9SF1-211ENST00000531406 GAKO14976 1311 aa15.88■□□□□ 0.13
TM9SF1-211ENST00000531406 PDS5AQ29RF7 1337 aaKnown RBP15.88■□□□□ 0.13
TM9SF1-211ENST00000531406 A0A1B0GUL7 405 aa15.87■□□□□ 0.13
TM9SF1-211ENST00000531406 ENTPD3O75355 529 aa15.87■□□□□ 0.13
TM9SF1-211ENST00000531406 EN2P19622 333 aaPredicted RBP15.87■□□□□ 0.13
TM9SF1-211ENST00000531406 RGS3P49796 1198 aa15.87■□□□□ 0.13
TM9SF1-211ENST00000531406 MOGSQ13724 837 aa15.87■□□□□ 0.13
TM9SF1-211ENST00000531406 KIF22Q14807 665 aa15.87■□□□□ 0.13
TM9SF1-211ENST00000531406 SLC9C1Q4G0N8 1177 aa15.87■□□□□ 0.13
TM9SF1-211ENST00000531406 C17orf99Q6UX52 265 aa15.87■□□□□ 0.13
TM9SF1-211ENST00000531406 NBPF11Q86T75 865 aa15.87■□□□□ 0.13
TM9SF1-211ENST00000531406 DZIP1Q86YF9 867 aaKnown RBP15.87■□□□□ 0.13
TM9SF1-211ENST00000531406 FAM163AQ96GL9 167 aaPredicted RBP15.87■□□□□ 0.13
TM9SF1-211ENST00000531406 XAGE2Q96GT9 111 aa15.87■□□□□ 0.13
TM9SF1-211ENST00000531406 TMEM106CQ9BVX2 250 aa15.87■□□□□ 0.13
TM9SF1-211ENST00000531406 ABCF2Q9UG63 623 aa15.87■□□□□ 0.13
TM9SF1-211ENST00000531406 ATRNL1Q5VV63 1379 aa15.87■□□□□ 0.13
TM9SF1-211ENST00000531406 PHF20L1A8MW92 1017 aa15.86■□□□□ 0.13
TM9SF1-211ENST00000531406 PDHXO00330 501 aa15.86■□□□□ 0.13
TM9SF1-211ENST00000531406 IPO8O15397 1037 aaKnown RBP15.86■□□□□ 0.13
TM9SF1-211ENST00000531406 MVPQ14764 893 aaKnown RBP15.86■□□□□ 0.13
TM9SF1-211ENST00000531406 SPTY2D1Q68D10 685 aaPredicted RBP15.86■□□□□ 0.13
TM9SF1-211ENST00000531406 SLF2Q8IX21 1173 aa15.86■□□□□ 0.13
TM9SF1-211ENST00000531406 CXCL11O14625 94 aa15.85■□□□□ 0.13
TM9SF1-211ENST00000531406 GNRH1P01148 92 aa15.85■□□□□ 0.13
TM9SF1-211ENST00000531406 TRIM27P14373 513 aa15.85■□□□□ 0.13
TM9SF1-211ENST00000531406 SH3BP5LQ7L8J4 393 aa15.85■□□□□ 0.13
TM9SF1-211ENST00000531406 CPA4Q9UI42 421 aa15.85■□□□□ 0.13
TM9SF1-211ENST00000531406 TNNQ9UQP3 1299 aa15.85■□□□□ 0.13
TM9SF1-211ENST00000531406 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.85■□□□□ 0.13
TM9SF1-211ENST00000531406 BCAR3O75815 825 aa15.84■□□□□ 0.13
TM9SF1-211ENST00000531406 GNAI2P04899 355 aa15.84■□□□□ 0.13
TM9SF1-211ENST00000531406 BTDP43251 543 aa15.84■□□□□ 0.13
TM9SF1-211ENST00000531406 PRMT2P55345 433 aa15.84■□□□□ 0.13
TM9SF1-211ENST00000531406 MAP3K10Q02779 954 aa15.84■□□□□ 0.13
TM9SF1-211ENST00000531406 GPAT2Q6NUI2 795 aa15.84■□□□□ 0.13
TM9SF1-211ENST00000531406 ATF7IPQ6VMQ6 1270 aa15.84■□□□□ 0.13
TM9SF1-211ENST00000531406 ZSCAN29Q8IWY8 852 aaPredicted RBP15.84■□□□□ 0.13
TM9SF1-211ENST00000531406 SH3TC2Q8TF17 1288 aa15.84■□□□□ 0.13
TM9SF1-211ENST00000531406 NEUROD6Q96NK8 337 aa15.84■□□□□ 0.13
TM9SF1-211ENST00000531406 DDX4Q9NQI0 724 aaKnown RBP15.84■□□□□ 0.13
TM9SF1-211ENST00000531406 MROH7-TTC4A0A0A0MT08 1334 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms