RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 F8W031 263 aaPredicted RBP10.65□□□□□ -0.7
CD44-232ENST00000531118 TNFAIP1Q13829 316 aa10.65□□□□□ -0.7
CD44-232ENST00000531118 PPP1R15BQ5SWA1 713 aa10.65□□□□□ -0.7
CD44-232ENST00000531118 TRIM47Q96LD4 638 aa10.65□□□□□ -0.7
CD44-232ENST00000531118 GREM2Q9H772 168 aa10.65□□□□□ -0.7
CD44-232ENST00000531118 MTMR10Q9NXD2 777 aa10.65□□□□□ -0.7
CD44-232ENST00000531118 IRS2Q9Y4H2 1338 aa10.64□□□□□ -0.71
CD44-232ENST00000531118 CHL1O00533 1208 aa10.64□□□□□ -0.71
CD44-232ENST00000531118 PSMC4P43686 418 aa10.64□□□□□ -0.71
CD44-232ENST00000531118 UBXN2AP68543 259 aa10.64□□□□□ -0.71
CD44-232ENST00000531118 PRMT6Q96LA8 375 aaPredicted RBP10.64□□□□□ -0.71
CD44-232ENST00000531118 TEPSINQ96N21 525 aa10.64□□□□□ -0.71
CD44-232ENST00000531118 GDF15Q99988 308 aa10.64□□□□□ -0.71
CD44-232ENST00000531118 UNC93B1Q9H1C4 597 aa10.64□□□□□ -0.71
CD44-232ENST00000531118 PNNQ9H307 717 aaKnown RBP10.64□□□□□ -0.71
CD44-232ENST00000531118 CD209Q9NNX6 404 aa10.64□□□□□ -0.71
CD44-232ENST00000531118 CSADQ9Y600 493 aa10.64□□□□□ -0.71
CD44-232ENST00000531118 SNCAIPQ9Y6H5 919 aa10.64□□□□□ -0.71
CD44-232ENST00000531118 PTPRFP10586 1907 aa10.63□□□□□ -0.71
CD44-232ENST00000531118 CETPP11597 493 aa10.63□□□□□ -0.71
CD44-232ENST00000531118 BMP8BP34820 402 aa10.63□□□□□ -0.71
CD44-232ENST00000531118 PRKCZQ05513 592 aa10.63□□□□□ -0.71
CD44-232ENST00000531118 DSG2Q14126 1118 aa10.63□□□□□ -0.71
CD44-232ENST00000531118 LRIT3Q3SXY7 679 aa10.63□□□□□ -0.71
CD44-232ENST00000531118 C17orf99Q6UX52 265 aa10.63□□□□□ -0.71
CD44-232ENST00000531118 TTLL11Q8NHH1 800 aa10.63□□□□□ -0.71
CD44-232ENST00000531118 CPA4Q9UI42 421 aa10.63□□□□□ -0.71
CD44-232ENST00000531118 DOCK3Q8IZD9 2030 aa10.63□□□□□ -0.71
CD44-232ENST00000531118 COL2A1P02458 1487 aaPredicted RBP10.62□□□□□ -0.71
CD44-232ENST00000531118 RPTORQ8N122 1335 aa10.62□□□□□ -0.71
CD44-232ENST00000531118 HOXD10P28358 340 aa10.62□□□□□ -0.71
CD44-232ENST00000531118 IGHMBP2P38935 993 aaKnown RBP10.62□□□□□ -0.71
CD44-232ENST00000531118 TMPOP42166 694 aaKnown RBP10.62□□□□□ -0.71
CD44-232ENST00000531118 KCNJ4P48050 445 aa10.62□□□□□ -0.71
CD44-232ENST00000531118 BCAMP50895 628 aa10.62□□□□□ -0.71
CD44-232ENST00000531118 FKBP1AP62942 108 aaKnown RBP10.62□□□□□ -0.71
CD44-232ENST00000531118 MAP3K9P80192 1104 aa10.62□□□□□ -0.71
CD44-232ENST00000531118 SNAPC2Q13487 334 aa10.62□□□□□ -0.71
CD44-232ENST00000531118 C7orf61Q8IZ16 206 aa10.62□□□□□ -0.71
CD44-232ENST00000531118 PCGF6Q9BYE7 350 aa10.62□□□□□ -0.71
CD44-232ENST00000531118 ANKRD2Q9GZV1 360 aa10.62□□□□□ -0.71
CD44-232ENST00000531118 PHAXQ9H814 394 aaKnown RBP10.62□□□□□ -0.71
CD44-232ENST00000531118 BIN2Q9UBW5 565 aaPredicted RBP10.62□□□□□ -0.71
CD44-232ENST00000531118 ZNF70Q9UC06 446 aaPredicted RBP10.62□□□□□ -0.71
CD44-232ENST00000531118 IRF6O14896 467 aa10.61□□□□□ -0.71
CD44-232ENST00000531118 FMNL1O95466 1100 aaPredicted RBP10.61□□□□□ -0.71
CD44-232ENST00000531118 SGPL1O95470 568 aa10.61□□□□□ -0.71
CD44-232ENST00000531118 RBM5P52756 815 aaKnown RBP eCLIP10.61□□□□□ -0.71
CD44-232ENST00000531118 PPIL2Q13356 520 aa10.61□□□□□ -0.71
CD44-232ENST00000531118 DUSP27Q5VZP5 1158 aa10.61□□□□□ -0.71
CD44-232ENST00000531118 PLPP6Q8IY26 295 aa10.61□□□□□ -0.71
CD44-232ENST00000531118 TMEM39BQ9GZU3 492 aa10.61□□□□□ -0.71
CD44-232ENST00000531118 PRDM6Q9NQX0 595 aa10.61□□□□□ -0.71
CD44-232ENST00000531118 ZMYND8Q9ULU4 1186 aaPredicted RBP10.61□□□□□ -0.71
CD44-232ENST00000531118 JAG2Q9Y219 1238 aa10.61□□□□□ -0.71
CD44-232ENST00000531118 LAS1LQ9Y4W2 734 aaKnown RBP10.61□□□□□ -0.71
CD44-232ENST00000531118 INHAP05111 366 aa10.6□□□□□ -0.71
CD44-232ENST00000531118 CHRNDQ07001 517 aa10.6□□□□□ -0.71
CD44-232ENST00000531118 TRIM26Q12899 539 aaPredicted RBP10.6□□□□□ -0.71
CD44-232ENST00000531118 ERO1BQ86YB8 467 aa10.6□□□□□ -0.71
CD44-232ENST00000531118 TDHQ8IZJ6 230 aa10.6□□□□□ -0.71
CD44-232ENST00000531118 HELBQ8NG08 1087 aaPredicted RBP10.6□□□□□ -0.71
CD44-232ENST00000531118 DIS3LQ8TF46 1054 aaKnown RBP10.6□□□□□ -0.71
CD44-232ENST00000531118 METTL22Q9BUU2 404 aaPredicted RBP10.6□□□□□ -0.71
CD44-232ENST00000531118 RPAP1Q9BWH6 1393 aaPredicted RBP10.6□□□□□ -0.71
CD44-232ENST00000531118 MAST2Q6P0Q8 1798 aa10.6□□□□□ -0.71
CD44-232ENST00000531118 DOCK2Q92608 1830 aa10.59□□□□□ -0.71
CD44-232ENST00000531118 TCP10L2B9ZVM9 353 aa10.59□□□□□ -0.71
CD44-232ENST00000531118 SNAP23O00161 211 aa10.59□□□□□ -0.71
CD44-232ENST00000531118 IL1R1P14778 569 aa10.59□□□□□ -0.71
CD44-232ENST00000531118 ITGA6P23229 1130 aa10.59□□□□□ -0.71
CD44-232ENST00000531118 MAGEA10P43363 369 aaPredicted RBP10.59□□□□□ -0.71
CD44-232ENST00000531118 FCGRTP55899 365 aa10.59□□□□□ -0.71
CD44-232ENST00000531118 C15orf52Q6ZUT6 534 aaKnown RBP10.59□□□□□ -0.71
CD44-232ENST00000531118 ZNF804AQ7Z570 1209 aa10.59□□□□□ -0.71
CD44-232ENST00000531118 ANKRD23Q86SG2 305 aa10.59□□□□□ -0.71
CD44-232ENST00000531118 GUCD1Q96NT3 240 aa10.59□□□□□ -0.71
CD44-232ENST00000531118 WRNIP1Q96S55 665 aa10.59□□□□□ -0.71
CD44-232ENST00000531118 TDRD3Q9H7E2 651 aaKnown RBP10.59□□□□□ -0.71
CD44-232ENST00000531118 FAM205AQ6ZU69 1335 aa10.58□□□□□ -0.71
CD44-232ENST00000531118 PDHXO00330 501 aa10.58□□□□□ -0.72
CD44-232ENST00000531118 SNPHO15079 494 aa10.58□□□□□ -0.72
CD44-232ENST00000531118 IGKV5-2P06315 115 aa10.58□□□□□ -0.72
CD44-232ENST00000531118 BCRP11274 1271 aa10.58□□□□□ -0.72
CD44-232ENST00000531118 TNNI2P48788 182 aa10.58□□□□□ -0.72
CD44-232ENST00000531118 PAWRQ96IZ0 340 aaKnown RBP10.58□□□□□ -0.72
CD44-232ENST00000531118 DEFB118Q96PH6 123 aa10.58□□□□□ -0.72
CD44-232ENST00000531118 MPHOSPH8Q99549 860 aa10.58□□□□□ -0.72
CD44-232ENST00000531118 PAK6Q9NQU5 681 aaPredicted RBP10.58□□□□□ -0.72
CD44-232ENST00000531118 GABRQQ9UN88 632 aa10.58□□□□□ -0.72
CD44-232ENST00000531118 AK9Q5TCS8 1911 aa10.58□□□□□ -0.72
CD44-232ENST00000531118 MYH13Q9UKX3 1938 aa10.58□□□□□ -0.72
CD44-232ENST00000531118 FRMPD3Q5JV73 1810 aa10.58□□□□□ -0.72
CD44-232ENST00000531118 EYSQ5T1H1 3165 aa10.57□□□□□ -0.72
CD44-232ENST00000531118 ADCY3O60266 1144 aa10.57□□□□□ -0.72
CD44-232ENST00000531118 TFRCP02786 760 aaKnown RBP10.57□□□□□ -0.72
CD44-232ENST00000531118 ELNP15502 786 aa10.57□□□□□ -0.72
CD44-232ENST00000531118 SYN1P17600 705 aa10.57□□□□□ -0.72
CD44-232ENST00000531118 CAPN2P17655 700 aa10.57□□□□□ -0.72
CD44-232ENST00000531118 CAMK2BQ13554 666 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms