RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 ZKSCAN1P17029 563 aaPredicted RBP17.19■□□□□ 0.34
TTC39A-216ENST00000530004 HDLBPQ00341 1268 aaKnown RBP17.19■□□□□ 0.34
TTC39A-216ENST00000530004 RNF20Q5VTR2 975 aa17.19■□□□□ 0.34
TTC39A-216ENST00000530004 TMED8Q6PL24 325 aaPredicted RBP17.19■□□□□ 0.34
TTC39A-216ENST00000530004 MRIQ9BWK5 157 aa17.19■□□□□ 0.34
TTC39A-216ENST00000530004 HDAC9Q9UKV0 1011 aa17.19■□□□□ 0.34
TTC39A-216ENST00000530004 DOCK2Q92608 1830 aa17.19■□□□□ 0.34
TTC39A-216ENST00000530004 TCRBV5S4A2TA0A5A2 114 aa17.18■□□□□ 0.34
TTC39A-216ENST00000530004 MMP14P50281 582 aa17.18■□□□□ 0.34
TTC39A-216ENST00000530004 GSTO1P78417 241 aa17.18■□□□□ 0.34
TTC39A-216ENST00000530004 MICALL2Q8IY33 904 aa17.18■□□□□ 0.34
TTC39A-216ENST00000530004 L3MBTL3Q96JM7 780 aaPredicted RBP17.18■□□□□ 0.34
TTC39A-216ENST00000530004 DSCC1Q9BVC3 393 aa17.18■□□□□ 0.34
TTC39A-216ENST00000530004 UPF3BQ9BZI7 483 aaKnown RBP17.18■□□□□ 0.34
TTC39A-216ENST00000530004 GPRC5DQ9NZD1 345 aa17.18■□□□□ 0.34
TTC39A-216ENST00000530004 CNOT7Q9UIV1 285 aaKnown RBP17.18■□□□□ 0.34
TTC39A-216ENST00000530004 SERPINA10Q9UK55 444 aa17.18■□□□□ 0.34
TTC39A-216ENST00000530004 MYO5AQ9Y4I1 1855 aaKnown RBP17.18■□□□□ 0.34
TTC39A-216ENST00000530004 SHTN1A0MZ66 631 aa17.17■□□□□ 0.34
TTC39A-216ENST00000530004 HSPD1P10809 573 aaKnown RBP17.17■□□□□ 0.34
TTC39A-216ENST00000530004 CYP7A1P22680 504 aa17.17■□□□□ 0.34
TTC39A-216ENST00000530004 CRKP46108 304 aa17.17■□□□□ 0.34
TTC39A-216ENST00000530004 ZNF280AP59817 542 aaPredicted RBP17.17■□□□□ 0.34
TTC39A-216ENST00000530004 HHIPL2Q6UWX4 724 aa17.17■□□□□ 0.34
TTC39A-216ENST00000530004 ADGRA1Q86SQ6 560 aa17.17■□□□□ 0.34
TTC39A-216ENST00000530004 SLF2Q8IX21 1173 aa17.17■□□□□ 0.34
TTC39A-216ENST00000530004 SPRYD3Q8NCJ5 442 aa17.17■□□□□ 0.34
TTC39A-216ENST00000530004 TEKT1Q969V4 418 aa17.17■□□□□ 0.34
TTC39A-216ENST00000530004 FAM163AQ96GL9 167 aaPredicted RBP17.17■□□□□ 0.34
TTC39A-216ENST00000530004 GPAA1O43292 621 aa17.17■□□□□ 0.34
TTC39A-216ENST00000530004 LDHCP07864 332 aa17.17■□□□□ 0.34
TTC39A-216ENST00000530004 MROH7-TTC4A0A0A0MT08 1334 aa17.16■□□□□ 0.34
TTC39A-216ENST00000530004 GAKO14976 1311 aa17.16■□□□□ 0.34
TTC39A-216ENST00000530004 ADCK5Q3MIX3 580 aa17.16■□□□□ 0.34
TTC39A-216ENST00000530004 JAKMIP1Q96N16 626 aaKnown RBP17.16■□□□□ 0.34
TTC39A-216ENST00000530004 DAGLAQ9Y4D2 1042 aa17.16■□□□□ 0.34
TTC39A-216ENST00000530004 H7C1D1 291 aa17.15■□□□□ 0.34
TTC39A-216ENST00000530004 CASTP20810 708 aaKnown RBP17.15■□□□□ 0.34
TTC39A-216ENST00000530004 LMOD1P29536 600 aaPredicted RBP17.15■□□□□ 0.34
TTC39A-216ENST00000530004 EPS15P42566 896 aa17.15■□□□□ 0.34
TTC39A-216ENST00000530004 CFAP100Q494V2 611 aa17.15■□□□□ 0.34
TTC39A-216ENST00000530004 SLKQ9H2G2 1235 aaPredicted RBP17.15■□□□□ 0.34
TTC39A-216ENST00000530004 MYOZ2Q9NPC6 264 aa17.15■□□□□ 0.34
TTC39A-216ENST00000530004 RBM5P52756 815 aaKnown RBP eCLIP17.15■□□□□ 0.34
TTC39A-216ENST00000530004 MTMR14Q8NCE2 650 aa17.15■□□□□ 0.34
TTC39A-216ENST00000530004 IL27Q8NEV9 243 aa17.15■□□□□ 0.34
TTC39A-216ENST00000530004 ZDHHC15Q96MV8 337 aa17.15■□□□□ 0.34
TTC39A-216ENST00000530004 TM6SF1Q9BZW5 370 aa17.15■□□□□ 0.34
TTC39A-216ENST00000530004 PCDHAC2Q9Y5I4 1007 aa17.15■□□□□ 0.34
TTC39A-216ENST00000530004 TAF6LQ9Y6J9 622 aa17.15■□□□□ 0.34
TTC39A-216ENST00000530004 MAST2Q6P0Q8 1798 aa17.14■□□□□ 0.33
TTC39A-216ENST00000530004 GPR75-ASB3A0A0A6YYF3 556 aa17.14■□□□□ 0.33
TTC39A-216ENST00000530004 FOXP2O15409 715 aa17.14■□□□□ 0.33
TTC39A-216ENST00000530004 MCM2P49736 904 aa17.14■□□□□ 0.33
TTC39A-216ENST00000530004 TSGA10IPQ3SY00 556 aa17.14■□□□□ 0.33
TTC39A-216ENST00000530004 APOBEC3HQ6NTF7 200 aaKnown RBP17.14■□□□□ 0.33
TTC39A-216ENST00000530004 SAMD7Q7Z3H4 446 aa17.14■□□□□ 0.33
TTC39A-216ENST00000530004 MIGA1Q8NAN2 632 aa17.14■□□□□ 0.33
TTC39A-216ENST00000530004 AATFQ9NY61 560 aaKnown RBP eCLIP17.14■□□□□ 0.33
TTC39A-216ENST00000530004 EGFRP00533 1210 aa17.13■□□□□ 0.33
TTC39A-216ENST00000530004 CYP21A2P08686 494 aa17.13■□□□□ 0.33
TTC39A-216ENST00000530004 BTDP43251 543 aa17.13■□□□□ 0.33
TTC39A-216ENST00000530004 DLGAP5Q15398 846 aa17.13■□□□□ 0.33
TTC39A-216ENST00000530004 AIDAQ96BJ3 306 aa17.13■□□□□ 0.33
TTC39A-216ENST00000530004 ZBED3Q96IU2 234 aaPredicted RBP17.13■□□□□ 0.33
TTC39A-216ENST00000530004 RIOK1Q9BRS2 568 aaKnown RBP17.13■□□□□ 0.33
TTC39A-216ENST00000530004 ZSWIM6Q9HCJ5 1215 aa17.13■□□□□ 0.33
TTC39A-216ENST00000530004 RPAP1Q9BWH6 1393 aaPredicted RBP17.13■□□□□ 0.33
TTC39A-216ENST00000530004 SPDYE2BA6NHP3 402 aa17.12■□□□□ 0.33
TTC39A-216ENST00000530004 POTECB2RU33 542 aa17.12■□□□□ 0.33
TTC39A-216ENST00000530004 BAG3O95817 575 aa17.12■□□□□ 0.33
TTC39A-216ENST00000530004 HSP90AA1P07900 732 aaKnown RBP17.12■□□□□ 0.33
TTC39A-216ENST00000530004 SPDYE6P0CI01 402 aa17.12■□□□□ 0.33
TTC39A-216ENST00000530004 CPA1P15085 419 aa17.12■□□□□ 0.33
TTC39A-216ENST00000530004 PSMA5P28066 241 aa17.12■□□□□ 0.33
TTC39A-216ENST00000530004 PPP4CP60510 307 aa17.12■□□□□ 0.33
TTC39A-216ENST00000530004 RBM26Q5T8P6 1007 aaKnown RBP17.12■□□□□ 0.33
TTC39A-216ENST00000530004 PRMT6Q96LA8 375 aaPredicted RBP17.12■□□□□ 0.33
TTC39A-216ENST00000530004 HACL1Q9UJ83 578 aa17.12■□□□□ 0.33
TTC39A-216ENST00000530004 CYP46A1Q9Y6A2 500 aa17.12■□□□□ 0.33
TTC39A-216ENST00000530004 MAGEB6P1A0A0J9YX57 407 aa17.12■□□□□ 0.33
TTC39A-216ENST00000530004 IQCA1LA6NCM1 817 aa17.12■□□□□ 0.33
TTC39A-216ENST00000530004 WNT10BO00744 389 aa17.12■□□□□ 0.33
TTC39A-216ENST00000530004 MBD4O95243 580 aa17.12■□□□□ 0.33
TTC39A-216ENST00000530004 DYNLL1P63167 89 aaKnown RBP17.12■□□□□ 0.33
TTC39A-216ENST00000530004 KRT32Q14532 448 aa17.12■□□□□ 0.33
TTC39A-216ENST00000530004 KIF4BQ2VIQ3 1234 aa17.12■□□□□ 0.33
TTC39A-216ENST00000530004 TBC1D10BQ4KMP7 808 aaPredicted RBP17.12■□□□□ 0.33
TTC39A-216ENST00000530004 RUFY3Q7L099 469 aa17.12■□□□□ 0.33
TTC39A-216ENST00000530004 TTC14Q96N46 770 aa17.12■□□□□ 0.33
TTC39A-216ENST00000530004 NOL10Q9BSC4 688 aaKnown RBP17.12■□□□□ 0.33
TTC39A-216ENST00000530004 ADARB2Q9NS39 739 aaKnown RBP17.12■□□□□ 0.33
TTC39A-216ENST00000530004 NOL8Q76FK4 1167 aaKnown RBP17.11■□□□□ 0.33
TTC39A-216ENST00000530004 TRPM4Q8TD43 1214 aa17.11■□□□□ 0.33
TTC39A-216ENST00000530004 STRBPQ96SI9 672 aaKnown RBP17.11■□□□□ 0.33
TTC39A-216ENST00000530004 CTNNA3Q9UI47 895 aa17.11■□□□□ 0.33
TTC39A-216ENST00000530004 WDR90Q96KV7 1748 aa17.11■□□□□ 0.33
TTC39A-216ENST00000530004 FGAP02671 866 aa17.1■□□□□ 0.33
TTC39A-216ENST00000530004 EPHX2P34913 555 aa17.1■□□□□ 0.33
TTC39A-216ENST00000530004 RHBDL3P58872 404 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms