RNA–Protein interactions for RNA: ENST00000529938.1

AP002884.3-204, humanhuman

TSL 1 (best)

Gene AP002884.3, Length 1,166 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002884.3-204ENST00000529938 IFIT1P09914 478 aaKnown RBP18.62■□□□□ 0.57
AP002884.3-204ENST00000529938 RBM5P52756 815 aaKnown RBP eCLIP18.62■□□□□ 0.57
AP002884.3-204ENST00000529938 LACTBP83111 547 aaPredicted RBP18.62■□□□□ 0.57
AP002884.3-204ENST00000529938 KIF22Q14807 665 aa18.62■□□□□ 0.57
AP002884.3-204ENST00000529938 MTFR1Q15390 333 aa18.62■□□□□ 0.57
AP002884.3-204ENST00000529938 TMEM57Q8N5G2 664 aa18.62■□□□□ 0.57
AP002884.3-204ENST00000529938 CNKSR2Q8WXI2 1034 aa18.62■□□□□ 0.57
AP002884.3-204ENST00000529938 AOX1Q06278 1338 aa18.62■□□□□ 0.57
AP002884.3-204ENST00000529938 MNX1P50219 401 aaPredicted RBP18.61■□□□□ 0.57
AP002884.3-204ENST00000529938 PRMT2P55345 433 aa18.61■□□□□ 0.57
AP002884.3-204ENST00000529938 GRIK5Q16478 980 aa18.61■□□□□ 0.57
AP002884.3-204ENST00000529938 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.61■□□□□ 0.57
AP002884.3-204ENST00000529938 UBE2Q1Q7Z7E8 422 aa18.61■□□□□ 0.57
AP002884.3-204ENST00000529938 NKX2-3Q8TAU0 364 aa18.61■□□□□ 0.57
AP002884.3-204ENST00000529938 HTATIP2Q9BUP3 242 aa18.61■□□□□ 0.57
AP002884.3-204ENST00000529938 CEP126Q9P2H0 1117 aa18.61■□□□□ 0.57
AP002884.3-204ENST00000529938 TTF2Q9UNY4 1162 aaKnown RBP18.61■□□□□ 0.57
AP002884.3-204ENST00000529938 ECM29Q5VYK3 1845 aa18.6■□□□□ 0.57
AP002884.3-204ENST00000529938 SRGAP3O43295 1099 aa18.6■□□□□ 0.57
AP002884.3-204ENST00000529938 TLR2O60603 784 aa18.6■□□□□ 0.57
AP002884.3-204ENST00000529938 CIAO1O76071 339 aa18.6■□□□□ 0.57
AP002884.3-204ENST00000529938 SLC5A1P13866 664 aa18.6■□□□□ 0.57
AP002884.3-204ENST00000529938 LPIN2Q92539 896 aa18.6■□□□□ 0.57
AP002884.3-204ENST00000529938 COPRSQ9NQ92 184 aa18.6■□□□□ 0.57
AP002884.3-204ENST00000529938 FBXO3Q9UK99 471 aa18.6■□□□□ 0.57
AP002884.3-204ENST00000529938 NR2E3Q9Y5X4 410 aa18.6■□□□□ 0.57
AP002884.3-204ENST00000529938 WDHD1O75717 1129 aaPredicted RBP18.59■□□□□ 0.57
AP002884.3-204ENST00000529938 GNAI2P04899 355 aa18.59■□□□□ 0.57
AP002884.3-204ENST00000529938 IL15P40933 162 aaPredicted RBP18.59■□□□□ 0.57
AP002884.3-204ENST00000529938 A0A1W2PPC1 479 aa18.58■□□□□ 0.56
AP002884.3-204ENST00000529938 ZBTB7BO15156 539 aaPredicted RBP18.58■□□□□ 0.56
AP002884.3-204ENST00000529938 GJA8P48165 433 aa18.58■□□□□ 0.56
AP002884.3-204ENST00000529938 MAP3K9P80192 1104 aa18.58■□□□□ 0.56
AP002884.3-204ENST00000529938 VGLL4Q14135 290 aa18.58■□□□□ 0.56
AP002884.3-204ENST00000529938 ATP2B3Q16720 1220 aa18.58■□□□□ 0.56
AP002884.3-204ENST00000529938 OTOFQ9HC10 1997 aa18.57■□□□□ 0.56
AP002884.3-204ENST00000529938 SOX1O00570 391 aaPredicted RBP18.57■□□□□ 0.56
AP002884.3-204ENST00000529938 GJB1P08034 283 aa18.57■□□□□ 0.56
AP002884.3-204ENST00000529938 MTX1Q13505 466 aa18.57■□□□□ 0.56
AP002884.3-204ENST00000529938 TNFAIP1Q13829 316 aa18.57■□□□□ 0.56
AP002884.3-204ENST00000529938 ZCCHC17Q9NP64 241 aaKnown RBP18.57■□□□□ 0.56
AP002884.3-204ENST00000529938 ZSWIM8A7E2V4 1837 aa18.56■□□□□ 0.56
AP002884.3-204ENST00000529938 RLBP1P12271 317 aa18.56■□□□□ 0.56
AP002884.3-204ENST00000529938 CRKP46108 304 aa18.56■□□□□ 0.56
AP002884.3-204ENST00000529938 SPDYE2Q495Y8 402 aa18.56■□□□□ 0.56
AP002884.3-204ENST00000529938 FTSJ3Q8IY81 847 aaKnown RBP18.56■□□□□ 0.56
AP002884.3-204ENST00000529938 DZIP1LQ8IYY4 767 aaKnown RBP18.56■□□□□ 0.56
AP002884.3-204ENST00000529938 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.56■□□□□ 0.56
AP002884.3-204ENST00000529938 TBC1D22AQ8WUA7 517 aa18.56■□□□□ 0.56
AP002884.3-204ENST00000529938 LRCH3Q96II8 777 aa18.56■□□□□ 0.56
AP002884.3-204ENST00000529938 TEPSINQ96N21 525 aa18.56■□□□□ 0.56
AP002884.3-204ENST00000529938 TDRD3Q9H7E2 651 aaKnown RBP18.56■□□□□ 0.56
AP002884.3-204ENST00000529938 ZNF70Q9UC06 446 aaPredicted RBP18.56■□□□□ 0.56
AP002884.3-204ENST00000529938 SERPINA10Q9UK55 444 aa18.56■□□□□ 0.56
AP002884.3-204ENST00000529938 LAMA3Q16787 3333 aa18.56■□□□□ 0.56
AP002884.3-204ENST00000529938 PNMA6EA0A0J9YXQ4 647 aa18.55■□□□□ 0.56
AP002884.3-204ENST00000529938 CETPP11597 493 aa18.55■□□□□ 0.56
AP002884.3-204ENST00000529938 TIMM10P62072 90 aa18.55■□□□□ 0.56
AP002884.3-204ENST00000529938 CDAN1Q8IWY9 1227 aa18.55■□□□□ 0.56
AP002884.3-204ENST00000529938 SRRDQ9UH36 339 aa18.55■□□□□ 0.56
AP002884.3-204ENST00000529938 CSADQ9Y600 493 aa18.55■□□□□ 0.56
AP002884.3-204ENST00000529938 BTBD19C9JJ37 291 aa18.54■□□□□ 0.56
AP002884.3-204ENST00000529938 CCL5P13501 91 aa18.54■□□□□ 0.56
AP002884.3-204ENST00000529938 ADORA1P30542 326 aa18.54■□□□□ 0.56
AP002884.3-204ENST00000529938 GRK4P32298 578 aa18.54■□□□□ 0.56
AP002884.3-204ENST00000529938 TFCP2Q12800 502 aa18.54■□□□□ 0.56
AP002884.3-204ENST00000529938 ITPRIPQ8IWB1 547 aa18.54■□□□□ 0.56
AP002884.3-204ENST00000529938 C1orf115Q9H7X2 142 aa18.54■□□□□ 0.56
AP002884.3-204ENST00000529938 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.54■□□□□ 0.56
AP002884.3-204ENST00000529938 SPDYE5A6NIY4 337 aa18.53■□□□□ 0.56
AP002884.3-204ENST00000529938 HOXD10P28358 340 aa18.53■□□□□ 0.56
AP002884.3-204ENST00000529938 CTGFP29279 349 aa18.53■□□□□ 0.56
AP002884.3-204ENST00000529938 PHKA1P46020 1223 aa18.53■□□□□ 0.56
AP002884.3-204ENST00000529938 C17orf99Q6UX52 265 aa18.53■□□□□ 0.56
AP002884.3-204ENST00000529938 RNF208Q9H0X6 261 aa18.53■□□□□ 0.56
AP002884.3-204ENST00000529938 ECM2O94769 699 aaPredicted RBP18.52■□□□□ 0.56
AP002884.3-204ENST00000529938 PSMC4P43686 418 aa18.52■□□□□ 0.56
AP002884.3-204ENST00000529938 WDR66Q8TBY9 1149 aa18.52■□□□□ 0.56
AP002884.3-204ENST00000529938 RAET1EQ8TD07 263 aa18.52■□□□□ 0.56
AP002884.3-204ENST00000529938 TRIM47Q96LD4 638 aa18.52■□□□□ 0.56
AP002884.3-204ENST00000529938 GNL3LQ9NVN8 582 aaKnown RBP18.52■□□□□ 0.56
AP002884.3-204ENST00000529938 TCP10L2B9ZVM9 353 aa18.51■□□□□ 0.55
AP002884.3-204ENST00000529938 FARP2O94887 1054 aaPredicted RBP18.51■□□□□ 0.55
AP002884.3-204ENST00000529938 OSBPP22059 807 aa18.51■□□□□ 0.55
AP002884.3-204ENST00000529938 HDLBPQ00341 1268 aaKnown RBP18.51■□□□□ 0.55
AP002884.3-204ENST00000529938 SNAPC2Q13487 334 aa18.51■□□□□ 0.55
AP002884.3-204ENST00000529938 CCDC102BQ68D86 513 aa18.51■□□□□ 0.55
AP002884.3-204ENST00000529938 ERO1BQ86YB8 467 aa18.51■□□□□ 0.55
AP002884.3-204ENST00000529938 PANK1Q8TE04 598 aa18.51■□□□□ 0.55
AP002884.3-204ENST00000529938 TEKT1Q969V4 418 aa18.51■□□□□ 0.55
AP002884.3-204ENST00000529938 TMEM39BQ9GZU3 492 aa18.51■□□□□ 0.55
AP002884.3-204ENST00000529938 STAP2Q9UGK3 403 aa18.51■□□□□ 0.55
AP002884.3-204ENST00000529938 A0A1B0GUL7 405 aa18.5■□□□□ 0.55
AP002884.3-204ENST00000529938 IRF6O14896 467 aa18.5■□□□□ 0.55
AP002884.3-204ENST00000529938 EVI5O60447 810 aa18.5■□□□□ 0.55
AP002884.3-204ENST00000529938 ATP8B2P98198 1209 aa18.5■□□□□ 0.55
AP002884.3-204ENST00000529938 G3BP1Q13283 466 aaKnown RBP eCLIP18.5■□□□□ 0.55
AP002884.3-204ENST00000529938 U2AF1L4Q8WU68 220 aaKnown RBP18.5■□□□□ 0.55
AP002884.3-204ENST00000529938 NEUROD6Q96NK8 337 aa18.5■□□□□ 0.55
AP002884.3-204ENST00000529938 BIN2Q9UBW5 565 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms