RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 RALBP1Q15311 655 aa4.51□□□□□ -1.69
PTPRC-213ENST00000529828 CCDC30Q5VVM6 783 aa4.51□□□□□ -1.69
PTPRC-213ENST00000529828 MTMR14Q8NCE2 650 aa4.51□□□□□ -1.69
PTPRC-213ENST00000529828 SLC17A8Q8NDX2 589 aa4.51□□□□□ -1.69
PTPRC-213ENST00000529828 ZNF594Q96JF6 807 aaPredicted RBP4.51□□□□□ -1.69
PTPRC-213ENST00000529828 ZNF70Q9UC06 446 aaPredicted RBP4.51□□□□□ -1.69
PTPRC-213ENST00000529828 CDH23Q9H251 3354 aa4.51□□□□□ -1.69
PTPRC-213ENST00000529828 MYBBP1AQ9BQG0 1328 aaKnown RBP4.51□□□□□ -1.69
PTPRC-213ENST00000529828 H7C1W4 665 aa4.51□□□□□ -1.69
PTPRC-213ENST00000529828 RGS20O76081 388 aa4.51□□□□□ -1.69
PTPRC-213ENST00000529828 CTGFP29279 349 aa4.51□□□□□ -1.69
PTPRC-213ENST00000529828 LACTBP83111 547 aaPredicted RBP4.51□□□□□ -1.69
PTPRC-213ENST00000529828 GRIK5Q16478 980 aa4.51□□□□□ -1.69
PTPRC-213ENST00000529828 ZNF804AQ7Z570 1209 aa4.51□□□□□ -1.69
PTPRC-213ENST00000529828 TEPSINQ96N21 525 aa4.51□□□□□ -1.69
PTPRC-213ENST00000529828 CPA4Q9UI42 421 aa4.51□□□□□ -1.69
PTPRC-213ENST00000529828 TTF2Q9UNY4 1162 aaKnown RBP4.51□□□□□ -1.69
PTPRC-213ENST00000529828 CSADQ9Y600 493 aa4.51□□□□□ -1.69
PTPRC-213ENST00000529828 MYH3P11055 1940 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 ANKRD18BA2A2Z9 1011 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 BTBD19C9JJ37 291 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 SOX1O00570 391 aaPredicted RBP4.5□□□□□ -1.69
PTPRC-213ENST00000529828 IL1R1P14778 569 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 GYG1P46976 350 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 MMP14P50281 582 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 GTF2A2P52657 109 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 CASP7P55210 303 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 MAP3K9P80192 1104 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 GCKRQ14397 625 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 MFSD14BQ5SR56 506 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.5□□□□□ -1.69
PTPRC-213ENST00000529828 ZKSCAN4Q969J2 545 aaPredicted RBP4.5□□□□□ -1.69
PTPRC-213ENST00000529828 LRCH3Q96II8 777 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 WRNIP1Q96S55 665 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 STK31Q9BXU1 1019 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 IQSEC3Q9UPP2 1182 aaPredicted RBP4.5□□□□□ -1.69
PTPRC-213ENST00000529828 SNCAIPQ9Y6H5 919 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 TLR2O60603 784 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 CSF1RP07333 972 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 CHAF1AQ13111 956 aaPredicted RBP4.5□□□□□ -1.69
PTPRC-213ENST00000529828 DDX10Q13206 875 aaKnown RBP4.5□□□□□ -1.69
PTPRC-213ENST00000529828 PDAP1Q13442 181 aaKnown RBP4.5□□□□□ -1.69
PTPRC-213ENST00000529828 TNFAIP1Q13829 316 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 KIF22Q14807 665 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 ARHGEF6Q15052 776 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 DZIP1LQ8IYY4 767 aaKnown RBP4.5□□□□□ -1.69
PTPRC-213ENST00000529828 TRIM47Q96LD4 638 aa4.5□□□□□ -1.69
PTPRC-213ENST00000529828 RTN4Q9NQC3 1192 aaKnown RBP4.5□□□□□ -1.69
PTPRC-213ENST00000529828 BIN2Q9UBW5 565 aaPredicted RBP4.5□□□□□ -1.69
PTPRC-213ENST00000529828 LAMB1P07942 1786 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 ECM29Q5VYK3 1845 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 PRUNE2Q8WUY3 3088 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 SPDYE5A6NIY4 337 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 UNCXA6NJT0 531 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 IRF6O14896 467 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 FMNL1O95466 1100 aaPredicted RBP4.49□□□□□ -1.69
PTPRC-213ENST00000529828 CCL5P13501 91 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 OSBPP22059 807 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 PBX2P40425 430 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 PSMC4P43686 418 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 CRKP46108 304 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 FLIIQ13045 1269 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 IFIT5Q13325 482 aaKnown RBP4.49□□□□□ -1.69
PTPRC-213ENST00000529828 FKBP5Q13451 457 aaPredicted RBP4.49□□□□□ -1.69
PTPRC-213ENST00000529828 TAF7LQ5H9L4 462 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 EPHA10Q5JZY3 1008 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 RAET1EQ8TD07 263 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 PLA2G12BQ9BX93 195 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 CNNM1Q9NRU3 951 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 MYPNQ86TC9 1320 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 MUC3AQ02505 3323 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 A0A1B0GUL6 1792 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 F6X3S4 739 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 WDHD1O75717 1129 aaPredicted RBP4.49□□□□□ -1.69
PTPRC-213ENST00000529828 CETPP11597 493 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 GRK4P32298 578 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 FOXO4P98177 505 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 PRKCZQ05513 592 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 CALD1Q05682 793 aaKnown RBP4.49□□□□□ -1.69
PTPRC-213ENST00000529828 SNAPC2Q13487 334 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 TWISTNBQ3B726 338 aaPredicted RBP4.49□□□□□ -1.69
PTPRC-213ENST00000529828 LMBR1LQ6UX01 489 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 C15orf52Q6ZUT6 534 aaKnown RBP4.49□□□□□ -1.69
PTPRC-213ENST00000529828 MIGA2Q7L4E1 593 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.49□□□□□ -1.69
PTPRC-213ENST00000529828 DNAAF4Q8WXU2 420 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 RNF208Q9H0X6 261 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 UNC93B1Q9H1C4 597 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 MYH16Q9H6N6 1097 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 SRRDQ9UH36 339 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 SERPINA10Q9UK55 444 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 RIPOR2Q9Y4F9 1068 aa4.49□□□□□ -1.69
PTPRC-213ENST00000529828 PDHXO00330 501 aa4.48□□□□□ -1.69
PTPRC-213ENST00000529828 ZBTB7BO15156 539 aaPredicted RBP4.48□□□□□ -1.69
PTPRC-213ENST00000529828 FARP2O94887 1054 aaPredicted RBP4.48□□□□□ -1.69
PTPRC-213ENST00000529828 HIBADHP31937 336 aaKnown RBP4.48□□□□□ -1.69
PTPRC-213ENST00000529828 INPP5BP32019 993 aa4.48□□□□□ -1.69
PTPRC-213ENST00000529828 TNNI2P48788 182 aa4.48□□□□□ -1.69
PTPRC-213ENST00000529828 FKBP1AP62942 108 aaKnown RBP4.48□□□□□ -1.69
PTPRC-213ENST00000529828 C17orf99Q6UX52 265 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms