RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 LRRFIP1Q32MZ4 808 aaKnown RBP4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 BRDTQ58F21 947 aaPredicted RBP4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 TMEM67Q5HYA8 995 aa4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 SCARA3Q6AZY7 606 aa4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 MRM1Q6IN84 353 aaKnown RBP4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 MRPL14Q6P1L8 145 aaKnown RBP4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 LLGL2Q6P1M3 1020 aa4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 TTC6Q86TZ1 520 aa4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 THNSL2Q86YJ6 484 aa4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 CCAR1Q8IX12 1150 aaKnown RBP4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 EXOC8Q8IYI6 725 aa4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 NINJ1Q92982 152 aa4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 GAL3ST3Q96A11 431 aa4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 SGSM3Q96HU1 749 aa4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 NSUN5Q96P11 429 aaKnown RBP4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 GAS2L1Q99501 681 aaPredicted RBP4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 TM9SF2Q99805 663 aa4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 FAM126AQ9BYI3 521 aaPredicted RBP4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 CLEC4MQ9H2X3 399 aaPredicted RBP4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 STRN4Q9NRL3 753 aa4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 PRR12Q9ULL5 1215 aa4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 POLR3KQ9Y2Y1 108 aaPredicted RBP4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 EID1Q9Y6B2 187 aa4.82□□□□□ -1.64
AMBRA1-208ENST00000529558 SOS2Q07890 1332 aaPredicted RBP4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 FIGNL2A6NMB9 653 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 ZBTB42B2RXF5 422 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 TNFRSF10AO00220 468 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 B3GALT4O96024 378 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 THBS1P07996 1170 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 MAPTP10636 758 aaKnown RBP4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 GUCY2CP25092 1073 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 CNGA1P29973 690 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 STAT3P40763 770 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 TBX4P57082 545 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 PTPN11Q06124 597 aaPredicted RBP4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 SPEM2Q0P670 501 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 ZNF423Q2M1K9 1284 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 ZC3H12BQ5HYM0 836 aaKnown RBP4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 EEPD1Q7L9B9 569 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 SULF2Q8IWU5 870 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 NIM1KQ8IY84 436 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 STK35Q8TDR2 534 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 MORC4Q8TE76 937 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 CHAC2Q8WUX2 184 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 BSNDQ8WZ55 320 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 BHMTQ93088 406 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 MFSD3Q96ES6 412 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 C8orf48Q96LL4 319 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 SLC26A8Q96RN1 970 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 POP1Q99575 1024 aaKnown RBP4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 SPATA9Q9BWV2 254 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 EMILIN2Q9BXX0 1053 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 RASSF4Q9H2L5 321 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 ANTXR1Q9H6X2 564 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 CAAP1Q9H8G2 361 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 MARK1Q9P0L2 795 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 HCN2Q9UL51 889 aa4.81□□□□□ -1.64
AMBRA1-208ENST00000529558 PRR36Q9H6K5 1346 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 A0A087X0B3 334 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 CCDC163A0A0D9SF12 145 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 DCDC2BA2VCK2 349 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 MEIS3P2A8K0S8 358 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 UPK3BL1B0FP48 263 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 UPK3BL2E5RIL1 263 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 J3QW42 95 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 PRC1O43663 620 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 GRIN3BO60391 1043 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 RFPL3O75679 317 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 MYCLP1P12525 358 aaPredicted RBP4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 ATP11AP98196 1134 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 PCDH1Q08174 1060 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 ZNF252P-AS1Q0IIN9 211 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 UBAP2LQ14157 1087 aaKnown RBP4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 IFFO2Q5TF58 517 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 HGSNATQ68CP4 663 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 DDX42Q86XP3 938 aaKnown RBP eCLIP4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 CCDC146Q8IYE0 955 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 TAB3Q8N5C8 712 aaPredicted RBP4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 ZBTB38Q8NAP3 1195 aaPredicted RBP4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 ZSCAN1Q8NBB4 408 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 PMM1Q92871 262 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 CCDC136Q96JN2 1154 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 SLC30A3Q99726 388 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 CBX8Q9HC52 389 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 TCEAL9Q9UHQ7 104 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 SLC12A7Q9Y666 1083 aa4.8□□□□□ -1.64
AMBRA1-208ENST00000529558 WASHC2CQ9Y4E1 1318 aa4.79□□□□□ -1.64
AMBRA1-208ENST00000529558 ALG1L2C9J202 215 aa4.79□□□□□ -1.64
AMBRA1-208ENST00000529558 ADCY3O60266 1144 aa4.79□□□□□ -1.64
AMBRA1-208ENST00000529558 PMLP29590 882 aa4.79□□□□□ -1.64
AMBRA1-208ENST00000529558 GPLD1P80108 840 aa4.79□□□□□ -1.64
AMBRA1-208ENST00000529558 NFKB2Q00653 900 aa4.79□□□□□ -1.64
AMBRA1-208ENST00000529558 PABPC4Q13310 644 aaKnown RBP eCLIP4.79□□□□□ -1.64
AMBRA1-208ENST00000529558 NCAPHQ15003 741 aa4.79□□□□□ -1.64
AMBRA1-208ENST00000529558 PERM1Q5SV97 790 aa4.79□□□□□ -1.64
AMBRA1-208ENST00000529558 INTS3Q68E01 1043 aaKnown RBP4.79□□□□□ -1.64
AMBRA1-208ENST00000529558 VN1R5Q7Z5H4 357 aa4.79□□□□□ -1.64
AMBRA1-208ENST00000529558 CDAN1Q8IWY9 1227 aa4.79□□□□□ -1.64
AMBRA1-208ENST00000529558 SMC5Q8IY18 1101 aa4.79□□□□□ -1.64
AMBRA1-208ENST00000529558 RAVER1Q8IY67 606 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms