RNA–Protein interactions for RNA: ENST00000528824.1

SNX7-204, Transcript of sorting nexin 7, humanhuman

TSL 1 (best)

Gene SNX7, Length 1,562 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX7-204ENST00000528824 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.79□□□□□ -0.84
SNX7-204ENST00000528824 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.79□□□□□ -0.84
SNX7-204ENST00000528824 PLA2G12BQ9BX93 195 aa9.79□□□□□ -0.84
SNX7-204ENST00000528824 MBIPQ9NS73 344 aa9.79□□□□□ -0.84
SNX7-204ENST00000528824 IFT57Q9NWB7 429 aa9.79□□□□□ -0.84
SNX7-204ENST00000528824 ZNF70Q9UC06 446 aaPredicted RBP9.79□□□□□ -0.84
SNX7-204ENST00000528824 MYPNQ86TC9 1320 aa9.78□□□□□ -0.84
SNX7-204ENST00000528824 PI4KAP2A4QPH2 592 aa9.78□□□□□ -0.84
SNX7-204ENST00000528824 IFIT5Q13325 482 aaKnown RBP9.78□□□□□ -0.84
SNX7-204ENST00000528824 PPIL2Q13356 520 aa9.78□□□□□ -0.84
SNX7-204ENST00000528824 UBE3BQ7Z3V4 1068 aa9.78□□□□□ -0.84
SNX7-204ENST00000528824 PI4KAP1Q8N8J0 262 aa9.78□□□□□ -0.84
SNX7-204ENST00000528824 U2AF1L4Q8WU68 220 aaKnown RBP9.78□□□□□ -0.84
SNX7-204ENST00000528824 PRO3102Q9H379 93 aa9.78□□□□□ -0.84
SNX7-204ENST00000528824 TTF2Q9UNY4 1162 aaKnown RBP9.78□□□□□ -0.84
SNX7-204ENST00000528824 ZNF646O15015 1829 aaPredicted RBP9.77□□□□□ -0.84
SNX7-204ENST00000528824 ECM29Q5VYK3 1845 aa9.77□□□□□ -0.84
SNX7-204ENST00000528824 H7C1W4 665 aa9.77□□□□□ -0.85
SNX7-204ENST00000528824 ELL2O00472 640 aaPredicted RBP9.77□□□□□ -0.85
SNX7-204ENST00000528824 PPP1R37O75864 691 aa9.77□□□□□ -0.85
SNX7-204ENST00000528824 SGPL1O95470 568 aa9.77□□□□□ -0.85
SNX7-204ENST00000528824 TFRCP02786 760 aaKnown RBP9.77□□□□□ -0.85
SNX7-204ENST00000528824 PPATQ06203 517 aa9.77□□□□□ -0.85
SNX7-204ENST00000528824 MTFR1Q15390 333 aa9.77□□□□□ -0.85
SNX7-204ENST00000528824 TAF7LQ5H9L4 462 aa9.77□□□□□ -0.85
SNX7-204ENST00000528824 MFSD14BQ5SR56 506 aa9.77□□□□□ -0.85
SNX7-204ENST00000528824 C17orf99Q6UX52 265 aa9.77□□□□□ -0.85
SNX7-204ENST00000528824 ANKRD23Q86SG2 305 aa9.77□□□□□ -0.85
SNX7-204ENST00000528824 CCDC146Q8IYE0 955 aa9.77□□□□□ -0.85
SNX7-204ENST00000528824 CERS5Q8N5B7 392 aa9.77□□□□□ -0.85
SNX7-204ENST00000528824 PARK7Q99497 189 aaKnown RBP9.77□□□□□ -0.85
SNX7-204ENST00000528824 TDRD3Q9H7E2 651 aaKnown RBP9.77□□□□□ -0.85
SNX7-204ENST00000528824 STXBP5LQ9Y2K9 1186 aa9.77□□□□□ -0.85
SNX7-204ENST00000528824 NEURL1BA8MQ27 555 aa9.76□□□□□ -0.85
SNX7-204ENST00000528824 TCP10L2B9ZVM9 353 aa9.76□□□□□ -0.85
SNX7-204ENST00000528824 BTBD19C9JJ37 291 aa9.76□□□□□ -0.85
SNX7-204ENST00000528824 OSBPP22059 807 aa9.76□□□□□ -0.85
SNX7-204ENST00000528824 BMP8BP34820 402 aa9.76□□□□□ -0.85
SNX7-204ENST00000528824 HDLBPQ00341 1268 aaKnown RBP9.76□□□□□ -0.85
SNX7-204ENST00000528824 DZIP1LQ8IYY4 767 aaKnown RBP9.76□□□□□ -0.85
SNX7-204ENST00000528824 TBC1D22AQ8WUA7 517 aa9.76□□□□□ -0.85
SNX7-204ENST00000528824 SHISA4Q96DD7 197 aa9.76□□□□□ -0.85
SNX7-204ENST00000528824 WRNIP1Q96S55 665 aa9.76□□□□□ -0.85
SNX7-204ENST00000528824 ARHGAP39Q9C0H5 1083 aa9.76□□□□□ -0.85
SNX7-204ENST00000528824 TRIOBPQ9H2D6 2365 aa9.76□□□□□ -0.85
SNX7-204ENST00000528824 IGKV5-2P06315 115 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 CSF1RP07333 972 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 KLRK1P26718 216 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 NECAB2Q7Z6G3 386 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 UBE2Q1Q7Z7E8 422 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 VPS37DQ86XT2 251 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 DEFB123Q8N688 67 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 CHMP3Q9Y3E7 222 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 FAM205AQ6ZU69 1335 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 MYH3P11055 1940 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 PDHXO00330 501 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 IRF6O14896 467 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 FRAT2O75474 233 aaPredicted RBP9.75□□□□□ -0.85
SNX7-204ENST00000528824 TAF5LO75529 589 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 CAP1Q01518 475 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 CCDC57Q2TAC2 916 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 CWF19L2Q2TBE0 894 aaKnown RBP9.75□□□□□ -0.85
SNX7-204ENST00000528824 FKBP1CQ5VVH2 108 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 FAM83AQ86UY5 434 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 PXYLP1Q8TE99 480 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 TEPSINQ96N21 525 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 ZNF341Q9BYN7 854 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 TMEM39BQ9GZU3 492 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 CNNM1Q9NRU3 951 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 CPA4Q9UI42 421 aa9.75□□□□□ -0.85
SNX7-204ENST00000528824 MAST3O60307 1309 aa9.74□□□□□ -0.85
SNX7-204ENST00000528824 ZNF853P0CG23 659 aa9.74□□□□□ -0.85
SNX7-204ENST00000528824 HIBADHP31937 336 aaKnown RBP9.74□□□□□ -0.85
SNX7-204ENST00000528824 CRKP46108 304 aa9.74□□□□□ -0.85
SNX7-204ENST00000528824 GCKRQ14397 625 aa9.74□□□□□ -0.85
SNX7-204ENST00000528824 LRIT3Q3SXY7 679 aa9.74□□□□□ -0.85
SNX7-204ENST00000528824 LDHAL6AQ6ZMR3 332 aa9.74□□□□□ -0.85
SNX7-204ENST00000528824 FASTKD5Q7L8L6 764 aaKnown RBP9.74□□□□□ -0.85
SNX7-204ENST00000528824 ANKLE1Q8NAG6 615 aa9.74□□□□□ -0.85
SNX7-204ENST00000528824 TEKT1Q969V4 418 aa9.74□□□□□ -0.85
SNX7-204ENST00000528824 TSHZ2Q9NRE2 1034 aa9.74□□□□□ -0.85
SNX7-204ENST00000528824 STAP2Q9UGK3 403 aa9.74□□□□□ -0.85
SNX7-204ENST00000528824 PCDHAC2Q9Y5I4 1007 aa9.74□□□□□ -0.85
SNX7-204ENST00000528824 ADCY3O60266 1144 aa9.73□□□□□ -0.85
SNX7-204ENST00000528824 UBE4AQ14139 1066 aa9.73□□□□□ -0.85
SNX7-204ENST00000528824 CAVIN4Q5BKX8 364 aa9.73□□□□□ -0.85
SNX7-204ENST00000528824 LINS1Q8NG48 757 aa9.73□□□□□ -0.85
SNX7-204ENST00000528824 LRCH3Q96II8 777 aa9.73□□□□□ -0.85
SNX7-204ENST00000528824 MRIQ9BWK5 157 aa9.73□□□□□ -0.85
SNX7-204ENST00000528824 SNCAIPQ9Y6H5 919 aa9.73□□□□□ -0.85
SNX7-204ENST00000528824 MKI67P46013 3256 aaKnown RBP9.73□□□□□ -0.85
SNX7-204ENST00000528824 PLIN1O60240 522 aa9.72□□□□□ -0.85
SNX7-204ENST00000528824 TMEM92Q6UXU6 159 aa9.72□□□□□ -0.85
SNX7-204ENST00000528824 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.72□□□□□ -0.85
SNX7-204ENST00000528824 TDRD7Q8NHU6 1098 aaKnown RBP9.72□□□□□ -0.85
SNX7-204ENST00000528824 COA7Q96BR5 231 aa9.72□□□□□ -0.85
SNX7-204ENST00000528824 SUGT1Q9Y2Z0 365 aa9.72□□□□□ -0.85
SNX7-204ENST00000528824 ADGRA2Q96PE1 1338 aa9.72□□□□□ -0.85
SNX7-204ENST00000528824 MYBBP1AQ9BQG0 1328 aaKnown RBP9.72□□□□□ -0.85
SNX7-204ENST00000528824 SPEF2Q9C093 1822 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms