RNA–Protein interactions for RNA: ENST00000528729.1

FDFT1-213, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-213ENST00000528729 SHROOM2Q13796 1616 aa8.77□□□□□ -1.01
FDFT1-213ENST00000528729 POTEIP0CG38 1075 aa8.77□□□□□ -1.01
FDFT1-213ENST00000528729 PHKG2P15735 406 aa8.77□□□□□ -1.01
FDFT1-213ENST00000528729 TYRP1P17643 537 aa8.77□□□□□ -1.01
FDFT1-213ENST00000528729 SCTRP47872 440 aa8.77□□□□□ -1.01
FDFT1-213ENST00000528729 PPP2R5EQ16537 467 aa8.77□□□□□ -1.01
FDFT1-213ENST00000528729 LONRF1Q17RB8 773 aa8.77□□□□□ -1.01
FDFT1-213ENST00000528729 TBCELQ5QJ74 424 aa8.77□□□□□ -1.01
FDFT1-213ENST00000528729 TTLL5Q6EMB2 1281 aa8.77□□□□□ -1.01
FDFT1-213ENST00000528729 TTC30BQ8N4P2 665 aa8.77□□□□□ -1.01
FDFT1-213ENST00000528729 JPH3Q8WXH2 748 aaPredicted RBP8.77□□□□□ -1.01
FDFT1-213ENST00000528729 CRBNQ96SW2 442 aa8.77□□□□□ -1.01
FDFT1-213ENST00000528729 YIPF4Q9BSR8 244 aa8.77□□□□□ -1.01
FDFT1-213ENST00000528729 CSRNP2Q9H175 543 aa8.77□□□□□ -1.01
FDFT1-213ENST00000528729 CHMP3Q9Y3E7 222 aa8.77□□□□□ -1.01
FDFT1-213ENST00000528729 CARMIL2Q6F5E8 1435 aa8.77□□□□□ -1.01
FDFT1-213ENST00000528729 DNAJC25-GNG10A0A024R161 153 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 PIP5K1CO60331 668 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 DXOO77932 396 aaKnown RBP8.76□□□□□ -1.01
FDFT1-213ENST00000528729 SERPINB3P29508 390 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 CRKP46108 304 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 CLCN6P51797 869 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 FAM160A1Q05DH4 1040 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 DGKZQ13574 1117 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 ALDH1L2Q3SY69 923 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 RNF219Q5W0B1 726 aaPredicted RBP8.76□□□□□ -1.01
FDFT1-213ENST00000528729 IFNL2Q8IZJ0 200 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 PHC3Q8NDX5 983 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 PI4K2BQ8TCG2 481 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 SNX29Q8TEQ0 813 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 ANKRD24Q8TF21 1146 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 KHSRPQ92945 711 aaKnown RBP eCLIP8.76□□□□□ -1.017e-26■□□□□ 9.3
FDFT1-213ENST00000528729 THAP11Q96EK4 314 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 IFT43Q96FT9 208 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 RHOBTB2Q9BYZ6 727 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 PLCB1Q9NQ66 1216 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 FAM13BQ9NYF5 915 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 PGAP2Q9UHJ9 254 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 EVLQ9UI08 416 aaPredicted RBP8.76□□□□□ -1.01
FDFT1-213ENST00000528729 HDAC9Q9UKV0 1011 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 IPPQ9Y573 584 aa8.76□□□□□ -1.01
FDFT1-213ENST00000528729 TNIKQ9UKE5 1360 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 DHX16O60231 1041 aaKnown RBP8.75□□□□□ -1.01
FDFT1-213ENST00000528729 MICAL2O94851 1124 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 SEC24BO95487 1268 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 CT47B1P0C2W7 299 aaPredicted RBP8.75□□□□□ -1.01
FDFT1-213ENST00000528729 FAM153BP0C7A2 387 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 ZSCAN20P17040 1043 aaPredicted RBP8.75□□□□□ -1.01
FDFT1-213ENST00000528729 RRM1P23921 792 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 WNT7BP56706 349 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 ZNF280AP59817 542 aaPredicted RBP8.75□□□□□ -1.01
FDFT1-213ENST00000528729 FAM193AP78312 1265 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 RTN1Q16799 776 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 SNAP47Q5SQN1 464 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 C1QTNF12Q5T7M4 302 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 PDXDC1Q6P996 788 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 DDX46Q7L014 1031 aaKnown RBP8.75□□□□□ -1.01
FDFT1-213ENST00000528729 WDR66Q8TBY9 1149 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 TIFAQ96CG3 184 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 RUSC1Q9BVN2 902 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 LRRC27Q9C0I9 530 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 TNKS2Q9H2K2 1166 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 ESF1Q9H501 851 aaKnown RBP8.75□□□□□ -1.01
FDFT1-213ENST00000528729 FBRSQ9HAH7 460 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 NPHS2Q9NP85 383 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 FOXD3Q9UJU5 478 aaPredicted RBP8.75□□□□□ -1.01
FDFT1-213ENST00000528729 MAP4K5Q9Y4K4 846 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 ABCC10Q5T3U5 1492 aa8.75□□□□□ -1.01
FDFT1-213ENST00000528729 PRSS47A8MTI9 375 aa8.74□□□□□ -1.01
FDFT1-213ENST00000528729 STAU1O95793 577 aaKnown RBP8.74□□□□□ -1.01
FDFT1-213ENST00000528729 RBP3P10745 1247 aa8.74□□□□□ -1.01
FDFT1-213ENST00000528729 POLD1P28340 1107 aa8.74□□□□□ -1.01
FDFT1-213ENST00000528729 CBX2Q14781 532 aaPredicted RBP8.74□□□□□ -1.01
FDFT1-213ENST00000528729 SAMD7Q7Z3H4 446 aa8.74□□□□□ -1.01
FDFT1-213ENST00000528729 STRA8Q7Z7C7 330 aa8.74□□□□□ -1.01
FDFT1-213ENST00000528729 BPHLQ86WA6 291 aaPredicted RBP8.74□□□□□ -1.01
FDFT1-213ENST00000528729 C3orf58Q8NDZ4 430 aa8.74□□□□□ -1.01
FDFT1-213ENST00000528729 GJA10Q969M2 543 aa8.74□□□□□ -1.01
FDFT1-213ENST00000528729 NGLY1Q96IV0 654 aa8.74□□□□□ -1.01
FDFT1-213ENST00000528729 FERD3LQ96RJ6 166 aa8.74□□□□□ -1.01
FDFT1-213ENST00000528729 KIF2CQ99661 725 aa8.74□□□□□ -1.01
FDFT1-213ENST00000528729 TARS2Q9BW92 718 aaKnown RBP8.74□□□□□ -1.01
FDFT1-213ENST00000528729 ZFYVE28Q9HCC9 887 aa8.74□□□□□ -1.01
FDFT1-213ENST00000528729 GTF2IRD1Q9UHL9 959 aa8.74□□□□□ -1.01
FDFT1-213ENST00000528729 LHX6Q9UPM6 363 aa8.74□□□□□ -1.01
FDFT1-213ENST00000528729 ROBO2Q9HCK4 1378 aa8.73□□□□□ -1.01
FDFT1-213ENST00000528729 POTEB3A0JP26 581 aa8.73□□□□□ -1.01
FDFT1-213ENST00000528729 GADD45BO75293 160 aaPredicted RBP8.73□□□□□ -1.01
FDFT1-213ENST00000528729 DDAH1O94760 285 aa8.73□□□□□ -1.01
FDFT1-213ENST00000528729 PF4P02776 101 aa8.73□□□□□ -1.01
FDFT1-213ENST00000528729 HIRAP54198 1017 aaPredicted RBP8.73□□□□□ -1.01
FDFT1-213ENST00000528729 GPSM2P81274 684 aa8.73□□□□□ -1.01
FDFT1-213ENST00000528729 LMNB2Q03252 620 aa8.73□□□□□ -1.01
FDFT1-213ENST00000528729 TCIRG1Q13488 830 aa8.73□□□□□ -1.01
FDFT1-213ENST00000528729 MTFR1Q15390 333 aa8.73□□□□□ -1.01
FDFT1-213ENST00000528729 CDC37Q16543 378 aaPredicted RBP8.73□□□□□ -1.01
FDFT1-213ENST00000528729 FAM98CQ17RN3 349 aaKnown RBP8.73□□□□□ -1.01
FDFT1-213ENST00000528729 MSS51Q4VC12 460 aa8.73□□□□□ -1.01
FDFT1-213ENST00000528729 ARSIQ5FYB1 569 aa8.73□□□□□ -1.01
FDFT1-213ENST00000528729 POTEBQ6S5H4 581 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms