RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 SUGT1Q9Y2Z0 365 aa11.17□□□□□ -0.62
CMTM1-210ENST00000528441 THSD7BQ9C0I4 1608 aa11.17□□□□□ -0.62
CMTM1-210ENST00000528441 TRPA1O75762 1119 aa11.16□□□□□ -0.62
CMTM1-210ENST00000528441 RLBP1P12271 317 aa11.16□□□□□ -0.62
CMTM1-210ENST00000528441 PRDX5P30044 214 aa11.16□□□□□ -0.62
CMTM1-210ENST00000528441 ATP8B2P98198 1209 aa11.16□□□□□ -0.62
CMTM1-210ENST00000528441 HDLBPQ00341 1268 aaKnown RBP11.16□□□□□ -0.62
CMTM1-210ENST00000528441 SREBF2Q12772 1141 aa11.16□□□□□ -0.62
CMTM1-210ENST00000528441 DIXDC1Q155Q3 683 aa11.16□□□□□ -0.62
CMTM1-210ENST00000528441 ERICH6Q7L0X2 663 aa11.16□□□□□ -0.62
CMTM1-210ENST00000528441 ZSCAN29Q8IWY8 852 aaPredicted RBP11.16□□□□□ -0.62
CMTM1-210ENST00000528441 HOOK2Q96ED9 719 aa11.16□□□□□ -0.62
CMTM1-210ENST00000528441 ZBED3Q96IU2 234 aaPredicted RBP11.16□□□□□ -0.62
CMTM1-210ENST00000528441 ZIC5Q96T25 663 aa11.16□□□□□ -0.62
CMTM1-210ENST00000528441 TMEM39BQ9GZU3 492 aa11.16□□□□□ -0.62
CMTM1-210ENST00000528441 RAI14Q9P0K7 980 aa11.16□□□□□ -0.62
CMTM1-210ENST00000528441 DDX19BQ9UMR2 479 aa11.16□□□□□ -0.62
CMTM1-210ENST00000528441 CSADQ9Y600 493 aa11.16□□□□□ -0.62
CMTM1-210ENST00000528441 HMMRO75330 724 aa11.15□□□□□ -0.62
CMTM1-210ENST00000528441 UQCRFS1P1P0C7P4 283 aa11.15□□□□□ -0.62
CMTM1-210ENST00000528441 VASPP50552 380 aaPredicted RBP11.15□□□□□ -0.62
CMTM1-210ENST00000528441 TCP10Q12799 353 aa11.15□□□□□ -0.62
CMTM1-210ENST00000528441 ZDHHC15Q96MV8 337 aa11.15□□□□□ -0.62
CMTM1-210ENST00000528441 USP40Q9NVE5 1235 aa11.15□□□□□ -0.62
CMTM1-210ENST00000528441 LRP2BPQ9P2M1 347 aa11.15□□□□□ -0.62
CMTM1-210ENST00000528441 AOX1Q06278 1338 aa11.14□□□□□ -0.63
CMTM1-210ENST00000528441 FAM155AB1AL88 458 aaPredicted RBP11.14□□□□□ -0.63
CMTM1-210ENST00000528441 PICALMQ13492 652 aa11.14□□□□□ -0.63
CMTM1-210ENST00000528441 RASGRF1Q13972 1273 aa11.14□□□□□ -0.63
CMTM1-210ENST00000528441 DCAF15Q66K64 600 aa11.14□□□□□ -0.63
CMTM1-210ENST00000528441 HHIPL2Q6UWX4 724 aa11.14□□□□□ -0.63
CMTM1-210ENST00000528441 ERC1Q8IUD2 1116 aa11.14□□□□□ -0.63
CMTM1-210ENST00000528441 ANKRD13AQ8IZ07 590 aa11.14□□□□□ -0.63
CMTM1-210ENST00000528441 ELP3Q9H9T3 547 aa11.14□□□□□ -0.63
CMTM1-210ENST00000528441 ZBTB47Q9UFB7 747 aaPredicted RBP11.14□□□□□ -0.63
CMTM1-210ENST00000528441 EXOC6BQ9Y2D4 811 aa11.14□□□□□ -0.63
CMTM1-210ENST00000528441 MYH2Q9UKX2 1941 aa11.13□□□□□ -0.63
CMTM1-210ENST00000528441 ZBTB7BO15156 539 aaPredicted RBP11.13□□□□□ -0.63
CMTM1-210ENST00000528441 GSTO1P78417 241 aa11.13□□□□□ -0.63
CMTM1-210ENST00000528441 HSP90AB4PQ58FF6 505 aa11.13□□□□□ -0.63
CMTM1-210ENST00000528441 TNNI3KQ59H18 835 aa11.13□□□□□ -0.63
CMTM1-210ENST00000528441 CEP85Q6P2H3 762 aa11.13□□□□□ -0.63
CMTM1-210ENST00000528441 SPATA5Q8NB90 893 aa11.13□□□□□ -0.63
CMTM1-210ENST00000528441 CCDC8Q9H0W5 538 aaPredicted RBP11.13□□□□□ -0.63
CMTM1-210ENST00000528441 SNRKQ9NRH2 765 aa11.13□□□□□ -0.63
CMTM1-210ENST00000528441 RNF186Q9NXI6 227 aa11.13□□□□□ -0.63
CMTM1-210ENST00000528441 DAGLAQ9Y4D2 1042 aa11.13□□□□□ -0.63
CMTM1-210ENST00000528441 FPGT-TNNI3KV9GXZ4 949 aa11.13□□□□□ -0.63
CMTM1-210ENST00000528441 MANSC4A6NHS7 340 aaPredicted RBP11.12□□□□□ -0.63
CMTM1-210ENST00000528441 LDHCP07864 332 aa11.12□□□□□ -0.63
CMTM1-210ENST00000528441 BTDP43251 543 aa11.12□□□□□ -0.63
CMTM1-210ENST00000528441 DGKZQ13574 1117 aa11.12□□□□□ -0.63
CMTM1-210ENST00000528441 OTUD7BQ6GQQ9 843 aa11.12□□□□□ -0.63
CMTM1-210ENST00000528441 AACSQ86V21 672 aa11.12□□□□□ -0.63
CMTM1-210ENST00000528441 SSH3Q8TE77 659 aa11.12□□□□□ -0.63
CMTM1-210ENST00000528441 WNK4Q96J92 1243 aa11.12□□□□□ -0.63
CMTM1-210ENST00000528441 CLMNQ96JQ2 1002 aa11.12□□□□□ -0.63
CMTM1-210ENST00000528441 WRNIP1Q96S55 665 aa11.12□□□□□ -0.63
CMTM1-210ENST00000528441 CSRNP1Q96S65 589 aa11.12□□□□□ -0.63
CMTM1-210ENST00000528441 DBNDD2Q9BQY9 259 aa11.12□□□□□ -0.63
CMTM1-210ENST00000528441 SAGE1Q9NXZ1 904 aa11.12□□□□□ -0.63
CMTM1-210ENST00000528441 CASP8AP2Q9UKL3 1982 aa11.12□□□□□ -0.63
CMTM1-210ENST00000528441 SALL1Q9NSC2 1324 aa11.11□□□□□ -0.63
CMTM1-210ENST00000528441 USP2O75604 605 aaPredicted RBP11.11□□□□□ -0.63
CMTM1-210ENST00000528441 WDHD1O75717 1129 aaPredicted RBP11.11□□□□□ -0.63
CMTM1-210ENST00000528441 TBC1D8O95759 1140 aa11.11□□□□□ -0.63
CMTM1-210ENST00000528441 MAP3K9P80192 1104 aa11.11□□□□□ -0.63
CMTM1-210ENST00000528441 SPRYD7Q5W111 196 aa11.11□□□□□ -0.63
CMTM1-210ENST00000528441 APOBEC3HQ6NTF7 200 aaKnown RBP11.11□□□□□ -0.63
CMTM1-210ENST00000528441 CDC42EP5Q6NZY7 148 aa11.11□□□□□ -0.63
CMTM1-210ENST00000528441 PI16Q6UXB8 463 aa11.11□□□□□ -0.63
CMTM1-210ENST00000528441 TBC1D9Q6ZT07 1266 aa11.11□□□□□ -0.63
CMTM1-210ENST00000528441 MIGA2Q7L4E1 593 aa11.11□□□□□ -0.63
CMTM1-210ENST00000528441 FAM83AQ86UY5 434 aa11.11□□□□□ -0.63
CMTM1-210ENST00000528441 OPTNQ96CV9 577 aa11.11□□□□□ -0.63
CMTM1-210ENST00000528441 OTUD5Q96G74 571 aa11.11□□□□□ -0.63
CMTM1-210ENST00000528441 TRIM34Q9BYJ4 488 aa11.11□□□□□ -0.63
CMTM1-210ENST00000528441 ZNF341Q9BYN7 854 aa11.11□□□□□ -0.63
CMTM1-210ENST00000528441 IL1RAPL2Q9NP60 686 aa11.11□□□□□ -0.63
CMTM1-210ENST00000528441 HMG20BQ9P0W2 317 aa11.11□□□□□ -0.63
CMTM1-210ENST00000528441 SSC5DA1L4H1 1573 aa11.11□□□□□ -0.63
CMTM1-210ENST00000528441 MROH7-TTC4A0A0A0MT08 1334 aa11.1□□□□□ -0.63
CMTM1-210ENST00000528441 CCDC85CA6NKD9 419 aa11.1□□□□□ -0.63
CMTM1-210ENST00000528441 IFIT2P09913 472 aaKnown RBP11.1□□□□□ -0.63
CMTM1-210ENST00000528441 ZBTB48P10074 688 aaPredicted RBP11.1□□□□□ -0.63
CMTM1-210ENST00000528441 NAA16Q6N069 864 aaPredicted RBP11.1□□□□□ -0.63
CMTM1-210ENST00000528441 CDAN1Q8IWY9 1227 aa11.1□□□□□ -0.63
CMTM1-210ENST00000528441 CLASRPQ8N2M8 674 aaKnown RBP11.1□□□□□ -0.63
CMTM1-210ENST00000528441 FAM151AQ8WW52 585 aa11.1□□□□□ -0.63
CMTM1-210ENST00000528441 MRIQ9BWK5 157 aa11.1□□□□□ -0.63
CMTM1-210ENST00000528441 IDH1O75874 414 aaKnown RBP11.09□□□□□ -0.63
CMTM1-210ENST00000528441 BAG3O95817 575 aa11.09□□□□□ -0.63
CMTM1-210ENST00000528441 ALDH1A1P00352 501 aa11.09□□□□□ -0.63
CMTM1-210ENST00000528441 ARID4AP29374 1257 aaPredicted RBP11.09□□□□□ -0.63
CMTM1-210ENST00000528441 MCAMP43121 646 aa11.09□□□□□ -0.63
CMTM1-210ENST00000528441 RGS3P49796 1198 aa11.09□□□□□ -0.63
CMTM1-210ENST00000528441 MECOMQ03112 1051 aa11.09□□□□□ -0.63
CMTM1-210ENST00000528441 NFIAQ12857 509 aa11.09□□□□□ -0.63
CMTM1-210ENST00000528441 VGLL4Q14135 290 aa11.09□□□□□ -0.63
CMTM1-210ENST00000528441 MAP3K11Q16584 847 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms