RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	DBNL	Q9UJU6	430 aa	Known RBP	14.47	□□□□□ -0.09
PSMC3-205	ENST00000528362	IREB2	P48200	963 aa	Known RBP	14.46	□□□□□ -0.09
PSMC3-205	ENST00000528362	NFIA	Q12857	509 aa		14.46	□□□□□ -0.09
PSMC3-205	ENST00000528362	SPRYD7	Q5W111	196 aa		14.46	□□□□□ -0.09
PSMC3-205	ENST00000528362	SPTY2D1	Q68D10	685 aa	Predicted RBP	14.46	□□□□□ -0.09
PSMC3-205	ENST00000528362	TBC1D9	Q6ZT07	1266 aa		14.46	□□□□□ -0.09
PSMC3-205	ENST00000528362	RPAP2	Q8IXW5	612 aa	Predicted RBP	14.46	□□□□□ -0.09
PSMC3-205	ENST00000528362	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	14.46	□□□□□ -0.09
PSMC3-205	ENST00000528362	EAF2	Q96CJ1	260 aa	Predicted RBP	14.46	□□□□□ -0.09
PSMC3-205	ENST00000528362	RNF186	Q9NXI6	227 aa		14.46	□□□□□ -0.09
PSMC3-205	ENST00000528362	SAGE1	Q9NXZ1	904 aa		14.46	□□□□□ -0.09
PSMC3-205	ENST00000528362	RPAP1	Q9BWH6	1393 aa	Predicted RBP	14.46	□□□□□ -0.1
PSMC3-205	ENST00000528362	UNCX	A6NJT0	531 aa		14.45	□□□□□ -0.1
PSMC3-205	ENST00000528362	MECOM	Q03112	1051 aa		14.45	□□□□□ -0.1
PSMC3-205	ENST00000528362	TTC39A	Q5SRH9	613 aa		14.45	□□□□□ -0.1
PSMC3-205	ENST00000528362	ERICH6	Q7L0X2	663 aa		14.45	□□□□□ -0.1
PSMC3-205	ENST00000528362	REM2	Q8IYK8	340 aa	Predicted RBP	14.45	□□□□□ -0.1
PSMC3-205	ENST00000528362	SLC10A4	Q96EP9	437 aa		14.45	□□□□□ -0.1
PSMC3-205	ENST00000528362	FAM163A	Q96GL9	167 aa	Predicted RBP	14.45	□□□□□ -0.1
PSMC3-205	ENST00000528362	CCDC8	Q9H0W5	538 aa	Predicted RBP	14.45	□□□□□ -0.1
PSMC3-205	ENST00000528362	USP40	Q9NVE5	1235 aa		14.45	□□□□□ -0.1
PSMC3-205	ENST00000528362	FAM198A	Q9UFP1	575 aa		14.45	□□□□□ -0.1
PSMC3-205	ENST00000528362	MROH7-TTC4	A0A0A0MT08	1334 aa		14.44	□□□□□ -0.1
PSMC3-205	ENST00000528362	TRPA1	O75762	1119 aa		14.44	□□□□□ -0.1
PSMC3-205	ENST00000528362	GJA5	P36382	358 aa		14.44	□□□□□ -0.1
PSMC3-205	ENST00000528362	CCDC158	Q5M9N0	1113 aa		14.44	□□□□□ -0.1
PSMC3-205	ENST00000528362	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	14.44	□□□□□ -0.1
PSMC3-205	ENST00000528362	ERC1	Q8IUD2	1116 aa		14.44	□□□□□ -0.1
PSMC3-205	ENST00000528362	ANKRD13A	Q8IZ07	590 aa		14.44	□□□□□ -0.1
PSMC3-205	ENST00000528362	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	14.44	□□□□□ -0.1
PSMC3-205	ENST00000528362	WNK4	Q96J92	1243 aa		14.44	□□□□□ -0.1
PSMC3-205	ENST00000528362	ZNF512B	Q96KM6	892 aa	Predicted RBP	14.44	□□□□□ -0.1
PSMC3-205	ENST00000528362	CHMP4B	Q9H444	224 aa	Known RBP	14.44	□□□□□ -0.1
PSMC3-205	ENST00000528362	SNRK	Q9NRH2	765 aa		14.44	□□□□□ -0.1
PSMC3-205	ENST00000528362	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	14.44	□□□□□ -0.1
PSMC3-205	ENST00000528362	RFX7	Q2KHR2	1363 aa		14.44	□□□□□ -0.1
PSMC3-205	ENST00000528362	ECM29	Q5VYK3	1845 aa		14.43	□□□□□ -0.1
PSMC3-205	ENST00000528362	HMMR	O75330	724 aa		14.43	□□□□□ -0.1
PSMC3-205	ENST00000528362	BTD	P43251	543 aa		14.43	□□□□□ -0.1
PSMC3-205	ENST00000528362	TCP10	Q12799	353 aa		14.43	□□□□□ -0.1
PSMC3-205	ENST00000528362	HSP90AB4P	Q58FF6	505 aa		14.43	□□□□□ -0.1
PSMC3-205	ENST00000528362	SLF2	Q8IX21	1173 aa		14.43	□□□□□ -0.1
PSMC3-205	ENST00000528362	FAM151A	Q8WW52	585 aa		14.43	□□□□□ -0.1
PSMC3-205	ENST00000528362	NSUN4	Q96CB9	384 aa	Known RBP	14.43	□□□□□ -0.1
PSMC3-205	ENST00000528362	YTHDC1	Q96MU7	727 aa	Known RBP	14.43	□□□□□ -0.1
PSMC3-205	ENST00000528362	IL1RAPL2	Q9NP60	686 aa		14.43	□□□□□ -0.1
PSMC3-205	ENST00000528362	GPR75-ASB3	A0A0A6YYF3	556 aa		14.42	□□□□□ -0.1
PSMC3-205	ENST00000528362	ZBTB48	P10074	688 aa	Predicted RBP	14.42	□□□□□ -0.1
PSMC3-205	ENST00000528362	ZAP70	P43403	619 aa		14.42	□□□□□ -0.1
PSMC3-205	ENST00000528362	TM4SF4	P48230	202 aa		14.42	□□□□□ -0.1
PSMC3-205	ENST00000528362	RHBDL3	P58872	404 aa		14.42	□□□□□ -0.1
PSMC3-205	ENST00000528362	SREBF2	Q12772	1141 aa		14.42	□□□□□ -0.1
PSMC3-205	ENST00000528362	VGLL4	Q14135	290 aa		14.42	□□□□□ -0.1
PSMC3-205	ENST00000528362	AACS	Q86V21	672 aa		14.42	□□□□□ -0.1
PSMC3-205	ENST00000528362	ZFPM1	Q8IX07	1006 aa		14.42	□□□□□ -0.1
PSMC3-205	ENST00000528362	RHPN1	Q8TCX5	695 aa		14.42	□□□□□ -0.1
PSMC3-205	ENST00000528362	IDI2	Q9BXS1	227 aa		14.42	□□□□□ -0.1
PSMC3-205	ENST00000528362	RAI14	Q9P0K7	980 aa		14.42	□□□□□ -0.1
PSMC3-205	ENST00000528362	APBB1	O00213	710 aa		14.41	□□□□□ -0.1
PSMC3-205	ENST00000528362	WDHD1	O75717	1129 aa	Predicted RBP	14.41	□□□□□ -0.1
PSMC3-205	ENST00000528362	CYP2E1	P05181	493 aa	Predicted RBP	14.41	□□□□□ -0.1
PSMC3-205	ENST00000528362	RGS3	P49796	1198 aa		14.41	□□□□□ -0.1
PSMC3-205	ENST00000528362	MAP3K9	P80192	1104 aa		14.41	□□□□□ -0.1
PSMC3-205	ENST00000528362	CNKSR2	Q8WXI2	1034 aa		14.41	□□□□□ -0.1
PSMC3-205	ENST00000528362	KIF1BP	Q96EK5	621 aa		14.41	□□□□□ -0.1
PSMC3-205	ENST00000528362	ELP3	Q9H9T3	547 aa		14.41	□□□□□ -0.1
PSMC3-205	ENST00000528362	DDX4	Q9NQI0	724 aa	Known RBP	14.41	□□□□□ -0.1
PSMC3-205	ENST00000528362	PIH1D3	Q9NQM4	214 aa	Known RBP	14.41	□□□□□ -0.1
PSMC3-205	ENST00000528362	LRP2BP	Q9P2M1	347 aa		14.41	□□□□□ -0.1
PSMC3-205	ENST00000528362	MANSC4	A6NHS7	340 aa	Predicted RBP	14.4	□□□□□ -0.1
PSMC3-205	ENST00000528362	ENTPD3	O75355	529 aa		14.4	□□□□□ -0.1
PSMC3-205	ENST00000528362	GSTO1	P78417	241 aa		14.4	□□□□□ -0.1
PSMC3-205	ENST00000528362	DCAF15	Q66K64	600 aa		14.4	□□□□□ -0.1
PSMC3-205	ENST00000528362	MIGA2	Q7L4E1	593 aa		14.4	□□□□□ -0.1
PSMC3-205	ENST00000528362	OPTN	Q96CV9	577 aa		14.4	□□□□□ -0.1
PSMC3-205	ENST00000528362	HOOK2	Q96ED9	719 aa		14.4	□□□□□ -0.1
PSMC3-205	ENST00000528362	WRNIP1	Q96S55	665 aa		14.4	□□□□□ -0.1
PSMC3-205	ENST00000528362	CSAD	Q9Y600	493 aa		14.4	□□□□□ -0.1
PSMC3-205	ENST00000528362	SNCAIP	Q9Y6H5	919 aa		14.4	□□□□□ -0.1
PSMC3-205	ENST00000528362	ATRNL1	Q5VV63	1379 aa		14.39	□□□□□ -0.11
PSMC3-205	ENST00000528362	LDHC	P07864	332 aa		14.39	□□□□□ -0.11
PSMC3-205	ENST00000528362	RRP1	P56182	461 aa	Known RBP	14.39	□□□□□ -0.11
PSMC3-205	ENST00000528362	SH3BP5L	Q7L8J4	393 aa		14.39	□□□□□ -0.11
PSMC3-205	ENST00000528362	ZKSCAN4	Q969J2	545 aa	Predicted RBP	14.39	□□□□□ -0.11
PSMC3-205	ENST00000528362	ZNF341	Q9BYN7	854 aa		14.39	□□□□□ -0.11
PSMC3-205	ENST00000528362	NDUFB9	Q9Y6M9	179 aa		14.39	□□□□□ -0.11
PSMC3-205	ENST00000528362	SPDYE5	A6NIY4	337 aa		14.38	□□□□□ -0.11
PSMC3-205	ENST00000528362	IGF2BP3	O00425	579 aa	Known RBP eCLIP	14.38	□□□□□ -0.11
PSMC3-205	ENST00000528362	RAB11FIP3	O75154	756 aa		14.38	□□□□□ -0.11
PSMC3-205	ENST00000528362	TBC1D8	O95759	1140 aa		14.38	□□□□□ -0.11
PSMC3-205	ENST00000528362	INPP5B	P32019	993 aa		14.38	□□□□□ -0.11
PSMC3-205	ENST00000528362	NAA16	Q6N069	864 aa	Predicted RBP	14.38	□□□□□ -0.11
PSMC3-205	ENST00000528362	ADGRA1	Q86SQ6	560 aa		14.38	□□□□□ -0.11
PSMC3-205	ENST00000528362	IFNL1	Q8IU54	200 aa		14.38	□□□□□ -0.11
PSMC3-205	ENST00000528362	CLASRP	Q8N2M8	674 aa	Known RBP	14.38	□□□□□ -0.11
PSMC3-205	ENST00000528362	MS4A4A	Q96JQ5	239 aa		14.38	□□□□□ -0.11
PSMC3-205	ENST00000528362	ZNF112	Q9UJU3	913 aa		14.38	□□□□□ -0.11
PSMC3-205	ENST00000528362	MYH13	Q9UKX3	1938 aa		14.37	□□□□□ -0.11
PSMC3-205	ENST00000528362	DDTL	A6NHG4	134 aa	Predicted RBP	14.37	□□□□□ -0.11
PSMC3-205	ENST00000528362	MAP4K4	O95819	1239 aa	Predicted RBP	14.37	□□□□□ -0.11

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms