RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 SURF6O75683 361 aaKnown RBP23.77■■□□□ 1.4
CAPN1-211ENST00000527739 INHBEP58166 350 aa23.77■■□□□ 1.4
CAPN1-211ENST00000527739 MAP3K9P80192 1104 aa23.77■■□□□ 1.4
CAPN1-211ENST00000527739 TCP10Q12799 353 aa23.77■■□□□ 1.4
CAPN1-211ENST00000527739 FKBP1CQ5VVH2 108 aa23.77■■□□□ 1.4
CAPN1-211ENST00000527739 CDC42EP5Q6NZY7 148 aa23.77■■□□□ 1.4
CAPN1-211ENST00000527739 FAM83AQ86UY5 434 aa23.77■■□□□ 1.4
CAPN1-211ENST00000527739 PANK1Q8TE04 598 aa23.77■■□□□ 1.4
CAPN1-211ENST00000527739 CSADQ9Y600 493 aa23.77■■□□□ 1.4
CAPN1-211ENST00000527739 POLA2Q14181 598 aa23.76■■□□□ 1.39
CAPN1-211ENST00000527739 SPTY2D1Q68D10 685 aaPredicted RBP23.76■■□□□ 1.39
CAPN1-211ENST00000527739 OPTNQ96CV9 577 aa23.76■■□□□ 1.39
CAPN1-211ENST00000527739 HOOK2Q96ED9 719 aa23.76■■□□□ 1.39
CAPN1-211ENST00000527739 SSH3Q8TE77 659 aa23.75■■□□□ 1.39
CAPN1-211ENST00000527739 ARAP2Q8WZ64 1704 aa23.75■■□□□ 1.39
CAPN1-211ENST00000527739 ECM29Q5VYK3 1845 aa23.75■■□□□ 1.39
CAPN1-211ENST00000527739 ALDH1A1P00352 501 aa23.74■■□□□ 1.39
CAPN1-211ENST00000527739 GJA5P36382 358 aa23.74■■□□□ 1.39
CAPN1-211ENST00000527739 PKN2Q16513 984 aaKnown RBP23.74■■□□□ 1.39
CAPN1-211ENST00000527739 NOM1Q5C9Z4 860 aaKnown RBP23.74■■□□□ 1.39
CAPN1-211ENST00000527739 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.74■■□□□ 1.39
CAPN1-211ENST00000527739 ERICH6Q7L0X2 663 aa23.74■■□□□ 1.39
CAPN1-211ENST00000527739 MIGA2Q7L4E1 593 aa23.74■■□□□ 1.39
CAPN1-211ENST00000527739 IFNL1Q8IU54 200 aa23.74■■□□□ 1.39
CAPN1-211ENST00000527739 SLF2Q8IX21 1173 aa23.74■■□□□ 1.39
CAPN1-211ENST00000527739 FAM151AQ8WW52 585 aa23.74■■□□□ 1.39
CAPN1-211ENST00000527739 CFHR5Q9BXR6 569 aa23.74■■□□□ 1.39
CAPN1-211ENST00000527739 PDE4DIPQ5VU43 2346 aa23.73■■□□□ 1.39
CAPN1-211ENST00000527739 NFIAQ12857 509 aa23.73■■□□□ 1.39
CAPN1-211ENST00000527739 VGLL4Q14135 290 aa23.73■■□□□ 1.39
CAPN1-211ENST00000527739 DCAF15Q66K64 600 aa23.73■■□□□ 1.39
CAPN1-211ENST00000527739 SPATA5Q8NB90 893 aa23.73■■□□□ 1.39
CAPN1-211ENST00000527739 WRNIP1Q96S55 665 aa23.73■■□□□ 1.39
CAPN1-211ENST00000527739 HMG20BQ9P0W2 317 aa23.73■■□□□ 1.39
CAPN1-211ENST00000527739 FKTNO75072 461 aa23.72■■□□□ 1.39
CAPN1-211ENST00000527739 MS4A1P11836 297 aa23.72■■□□□ 1.39
CAPN1-211ENST00000527739 OTUD7BQ6GQQ9 843 aa23.72■■□□□ 1.39
CAPN1-211ENST00000527739 PI16Q6UXB8 463 aa23.72■■□□□ 1.39
CAPN1-211ENST00000527739 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.72■■□□□ 1.39
CAPN1-211ENST00000527739 CNKSR2Q8WXI2 1034 aa23.72■■□□□ 1.39
CAPN1-211ENST00000527739 PDS5AQ29RF7 1337 aaKnown RBP23.71■■□□□ 1.39
CAPN1-211ENST00000527739 TNNI3KQ59H18 835 aa23.71■■□□□ 1.39
CAPN1-211ENST00000527739 TTC39AQ5SRH9 613 aa23.71■■□□□ 1.39
CAPN1-211ENST00000527739 TBC1D9Q6ZT07 1266 aa23.71■■□□□ 1.39
CAPN1-211ENST00000527739 ZKSCAN4Q969J2 545 aaPredicted RBP23.71■■□□□ 1.39
CAPN1-211ENST00000527739 OTUD5Q96G74 571 aa23.71■■□□□ 1.39
CAPN1-211ENST00000527739 RAI14Q9P0K7 980 aa23.71■■□□□ 1.39
CAPN1-211ENST00000527739 FPGT-TNNI3KV9GXZ4 949 aa23.71■■□□□ 1.39
CAPN1-211ENST00000527739 IGF2BP3O00425 579 aaKnown RBP eCLIP23.7■■□□□ 1.38
CAPN1-211ENST00000527739 ZBTB22O15209 634 aa23.7■■□□□ 1.38
CAPN1-211ENST00000527739 UQCRFS1P1P0C7P4 283 aa23.7■■□□□ 1.38
CAPN1-211ENST00000527739 CCDC158Q5M9N0 1113 aa23.7■■□□□ 1.38
CAPN1-211ENST00000527739 FBXO46Q6PJ61 603 aaPredicted RBP23.7■■□□□ 1.38
CAPN1-211ENST00000527739 ZNF341Q9BYN7 854 aa23.7■■□□□ 1.38
CAPN1-211ENST00000527739 BTDP43251 543 aa23.69■■□□□ 1.38
CAPN1-211ENST00000527739 MECOMQ03112 1051 aa23.69■■□□□ 1.38
CAPN1-211ENST00000527739 ZSCAN29Q8IWY8 852 aaPredicted RBP23.69■■□□□ 1.38
CAPN1-211ENST00000527739 DBNDD2Q9BQY9 259 aa23.69■■□□□ 1.38
CAPN1-211ENST00000527739 GPR108Q9NPR9 543 aa23.69■■□□□ 1.38
CAPN1-211ENST00000527739 SNRKQ9NRH2 765 aa23.69■■□□□ 1.38
CAPN1-211ENST00000527739 FAM198AQ9UFP1 575 aa23.69■■□□□ 1.38
CAPN1-211ENST00000527739 ARID4AP29374 1257 aaPredicted RBP23.68■■□□□ 1.38
CAPN1-211ENST00000527739 CEP85Q6P2H3 762 aa23.68■■□□□ 1.38
CAPN1-211ENST00000527739 ZFPM1Q8IX07 1006 aa23.68■■□□□ 1.38
CAPN1-211ENST00000527739 LRP2BPQ9P2M1 347 aa23.68■■□□□ 1.38
CAPN1-211ENST00000527739 RCAN3Q9UKA8 241 aa23.68■■□□□ 1.38
CAPN1-211ENST00000527739 MCAMP43121 646 aa23.67■■□□□ 1.38
CAPN1-211ENST00000527739 RGS3P49796 1198 aa23.67■■□□□ 1.38
CAPN1-211ENST00000527739 GTF2A2P52657 109 aa23.67■■□□□ 1.38
CAPN1-211ENST00000527739 GSTO1P78417 241 aa23.67■■□□□ 1.38
CAPN1-211ENST00000527739 PICALMQ13492 652 aa23.67■■□□□ 1.38
CAPN1-211ENST00000527739 COG6Q9Y2V7 657 aa23.67■■□□□ 1.38
CAPN1-211ENST00000527739 NOP58Q9Y2X3 529 aaKnown RBP23.67■■□□□ 1.38
CAPN1-211ENST00000527739 SNCAIPQ9Y6H5 919 aa23.67■■□□□ 1.38
CAPN1-211ENST00000527739 MROH7-TTC4A0A0A0MT08 1334 aa23.66■■□□□ 1.38
CAPN1-211ENST00000527739 GAKO14976 1311 aa23.66■■□□□ 1.38
CAPN1-211ENST00000527739 LAMB1P07942 1786 aa23.66■■□□□ 1.38
CAPN1-211ENST00000527739 CCL15-CCL14A0A0B4J2E2 113 aa23.66■■□□□ 1.38
CAPN1-211ENST00000527739 LDHCP07864 332 aa23.66■■□□□ 1.38
CAPN1-211ENST00000527739 CCL15Q16663 113 aa23.66■■□□□ 1.38
CAPN1-211ENST00000527739 ERO1BQ86YB8 467 aa23.66■■□□□ 1.38
CAPN1-211ENST00000527739 FAM163AQ96GL9 167 aaPredicted RBP23.66■■□□□ 1.38
CAPN1-211ENST00000527739 PTPN18Q99952 460 aa23.66■■□□□ 1.38
CAPN1-211ENST00000527739 CCDC8Q9H0W5 538 aaPredicted RBP23.66■■□□□ 1.38
CAPN1-211ENST00000527739 RPAP1Q9BWH6 1393 aaPredicted RBP23.65■■□□□ 1.38
CAPN1-211ENST00000527739 MYH13Q9UKX3 1938 aa23.65■■□□□ 1.38
CAPN1-211ENST00000527739 SPDYE5A6NIY4 337 aa23.65■■□□□ 1.38
CAPN1-211ENST00000527739 INPP5BP32019 993 aa23.65■■□□□ 1.38
CAPN1-211ENST00000527739 MS4A4AQ96JQ5 239 aa23.65■■□□□ 1.38
CAPN1-211ENST00000527739 EXOC6BQ9Y2D4 811 aa23.65■■□□□ 1.38
CAPN1-211ENST00000527739 OTOFQ9HC10 1997 aa23.65■■□□□ 1.38
CAPN1-211ENST00000527739 TESPA1A2RU30 521 aaPredicted RBP23.64■■□□□ 1.37
CAPN1-211ENST00000527739 ENTPD3O75355 529 aa23.64■■□□□ 1.37
CAPN1-211ENST00000527739 BRI3BPQ8WY22 251 aa23.64■■□□□ 1.37
CAPN1-211ENST00000527739 NSUN4Q96CB9 384 aaKnown RBP23.64■■□□□ 1.37
CAPN1-211ENST00000527739 IDI2Q9BXS1 227 aa23.64■■□□□ 1.37
CAPN1-211ENST00000527739 BCL11AQ9H165 835 aa23.64■■□□□ 1.37
CAPN1-211ENST00000527739 TRIM17Q9Y577 477 aa23.64■■□□□ 1.37
CAPN1-211ENST00000527739 GPR75-ASB3A0A0A6YYF3 556 aa23.63■■□□□ 1.37
CAPN1-211ENST00000527739 CRHR2Q13324 411 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms