RNA–Protein interactions for RNA: ENST00000527646.5

VPS51-204, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS51, Length 2,144 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-204ENST00000527646 CARMIL3Q8ND23 1372 aa21.91■■□□□ 1.1
VPS51-204ENST00000527646 KRT85P78386 507 aa21.91■■□□□ 1.1
VPS51-204ENST00000527646 FAM173BQ6P4H8 233 aa21.91■■□□□ 1.1
VPS51-204ENST00000527646 GYG1P46976 350 aa21.9■■□□□ 1.1
VPS51-204ENST00000527646 MB21D2Q8IYB1 491 aaPredicted RBP21.9■■□□□ 1.1
VPS51-204ENST00000527646 ANKRD2Q9GZV1 360 aa21.9■■□□□ 1.1
VPS51-204ENST00000527646 NUP62CLQ9H1M0 184 aa21.9■■□□□ 1.1
VPS51-204ENST00000527646 ZMYM6O95789 1325 aa21.9■■□□□ 1.1
VPS51-204ENST00000527646 WDR19Q8NEZ3 1342 aa21.9■■□□□ 1.1
VPS51-204ENST00000527646 PATL2C9JE40 543 aaKnown RBP21.89■■□□□ 1.1
VPS51-204ENST00000527646 PRC1O43663 620 aa21.89■■□□□ 1.1
VPS51-204ENST00000527646 MBD4O95243 580 aa21.89■■□□□ 1.1
VPS51-204ENST00000527646 GNAT2P19087 354 aa21.89■■□□□ 1.1
VPS51-204ENST00000527646 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.89■■□□□ 1.1
VPS51-204ENST00000527646 ALX1Q15699 326 aa21.89■■□□□ 1.09
VPS51-204ENST00000527646 LRRC4BQ9NT99 713 aa21.89■■□□□ 1.09
VPS51-204ENST00000527646 SMTNL1A8MU46 457 aa21.88■■□□□ 1.09
VPS51-204ENST00000527646 H3BQV1 296 aa21.88■■□□□ 1.09
VPS51-204ENST00000527646 PDIA3P30101 505 aaKnown RBP21.88■■□□□ 1.09
VPS51-204ENST00000527646 EVCP57679 992 aa21.88■■□□□ 1.09
VPS51-204ENST00000527646 TYRO3Q06418 890 aa21.88■■□□□ 1.09
VPS51-204ENST00000527646 IFFO2Q5TF58 517 aa21.88■■□□□ 1.09
VPS51-204ENST00000527646 SMARCC2Q8TAQ2 1214 aa21.88■■□□□ 1.09
VPS51-204ENST00000527646 NAPBQ9H115 298 aa21.88■■□□□ 1.09
VPS51-204ENST00000527646 DENND2AQ9ULE3 1009 aa21.88■■□□□ 1.09
VPS51-204ENST00000527646 IQSEC3Q9UPP2 1182 aaPredicted RBP21.88■■□□□ 1.09
VPS51-204ENST00000527646 SLC27A3Q5K4L6 730 aa21.88■■□□□ 1.09
VPS51-204ENST00000527646 TTC6Q86TZ1 520 aa21.88■■□□□ 1.09
VPS51-204ENST00000527646 CCDC24Q8N4L8 307 aa21.88■■□□□ 1.09
VPS51-204ENST00000527646 NACAP1Q9BZK3 213 aa21.88■■□□□ 1.09
VPS51-204ENST00000527646 OGFRQ9NZT2 677 aa21.88■■□□□ 1.09
VPS51-204ENST00000527646 ABCF2Q9UG63 623 aa21.88■■□□□ 1.09
VPS51-204ENST00000527646 MRVI1Q9Y6F6 885 aa21.88■■□□□ 1.09
VPS51-204ENST00000527646 PTGS1P23219 599 aa21.87■■□□□ 1.09
VPS51-204ENST00000527646 CCT2P78371 535 aaKnown RBP21.87■■□□□ 1.09
VPS51-204ENST00000527646 NSUN7Q8NE18 718 aaKnown RBP21.87■■□□□ 1.09
VPS51-204ENST00000527646 DDX11Q96FC9 970 aa21.87■■□□□ 1.09
VPS51-204ENST00000527646 ARMT1Q9H993 441 aa21.87■■□□□ 1.09
VPS51-204ENST00000527646 PAXBP1Q9Y5B6 917 aa21.87■■□□□ 1.09
VPS51-204ENST00000527646 PNPLA7Q6ZV29 1317 aa21.86■■□□□ 1.09
VPS51-204ENST00000527646 KRT27Q7Z3Y8 459 aa21.86■■□□□ 1.09
VPS51-204ENST00000527646 IFNL3Q8IZI9 196 aa21.86■■□□□ 1.09
VPS51-204ENST00000527646 CNBD1Q8NA66 436 aa21.86■■□□□ 1.09
VPS51-204ENST00000527646 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.86■■□□□ 1.09
VPS51-204ENST00000527646 SEMA3EO15041 775 aa21.86■■□□□ 1.09
VPS51-204ENST00000527646 DHX16O60231 1041 aaKnown RBP21.86■■□□□ 1.09
VPS51-204ENST00000527646 U2AF2P26368 475 aaKnown RBP eCLIP21.86■■□□□ 1.09
VPS51-204ENST00000527646 NFIXQ14938 502 aa21.86■■□□□ 1.09
VPS51-204ENST00000527646 FAM84BQ96KN1 310 aaPredicted RBP21.86■■□□□ 1.09
VPS51-204ENST00000527646 RAI14Q9P0K7 980 aa21.86■■□□□ 1.09
VPS51-204ENST00000527646 PTPDC1A2A3K4 754 aa21.85■■□□□ 1.09
VPS51-204ENST00000527646 SPDYE4A6NLX3 237 aa21.85■■□□□ 1.09
VPS51-204ENST00000527646 TBC1D10CQ8IV04 446 aa21.85■■□□□ 1.09
VPS51-204ENST00000527646 DDX19AQ9NUU7 478 aaKnown RBP21.85■■□□□ 1.09
VPS51-204ENST00000527646 SCAND2PQ9GZW5 306 aaPredicted RBP21.85■■□□□ 1.09
VPS51-204ENST00000527646 NBPF3Q9H094 633 aa21.85■■□□□ 1.09
VPS51-204ENST00000527646 CYP7A1P22680 504 aa21.84■■□□□ 1.09
VPS51-204ENST00000527646 HMGB2P26583 209 aaKnown RBP21.84■■□□□ 1.09
VPS51-204ENST00000527646 ANTXR2P58335 489 aa21.84■■□□□ 1.09
VPS51-204ENST00000527646 NCBP1Q09161 790 aaKnown RBP21.84■■□□□ 1.09
VPS51-204ENST00000527646 TNMDQ9H2S6 317 aa21.84■■□□□ 1.09
VPS51-204ENST00000527646 NCOA5Q9HCD5 579 aaKnown RBP21.84■■□□□ 1.09
VPS51-204ENST00000527646 SLC4A4Q9Y6R1 1079 aa21.84■■□□□ 1.09
VPS51-204ENST00000527646 KLF18A0A0U1RQI7 1052 aa21.83■■□□□ 1.09
VPS51-204ENST00000527646 TDO2P48775 406 aa21.83■■□□□ 1.09
VPS51-204ENST00000527646 CCDC186Q7Z3E2 898 aa21.83■■□□□ 1.09
VPS51-204ENST00000527646 PLA2G4DQ86XP0 818 aa21.83■■□□□ 1.09
VPS51-204ENST00000527646 LCORLQ8N3X6 602 aa21.83■■□□□ 1.09
VPS51-204ENST00000527646 ZSCAN16Q9H4T2 348 aaPredicted RBP21.83■■□□□ 1.09
VPS51-204ENST00000527646 CGNQ9P2M7 1197 aaKnown RBP21.83■■□□□ 1.09
VPS51-204ENST00000527646 WTIPA6NIX2 430 aaPredicted RBP21.83■■□□□ 1.08
VPS51-204ENST00000527646 CTDNEP1O95476 244 aa21.83■■□□□ 1.08
VPS51-204ENST00000527646 CAVIN2O95810 425 aa21.83■■□□□ 1.08
VPS51-204ENST00000527646 TM4SF1P30408 202 aa21.83■■□□□ 1.08
VPS51-204ENST00000527646 RBM43Q6ZSC3 357 aaKnown RBP21.83■■□□□ 1.08
VPS51-204ENST00000527646 FBXO33Q7Z6M2 555 aa21.83■■□□□ 1.08
VPS51-204ENST00000527646 LUZP1Q86V48 1076 aa21.83■■□□□ 1.08
VPS51-204ENST00000527646 DRC7Q8IY82 874 aa21.83■■□□□ 1.08
VPS51-204ENST00000527646 EPB41L4AQ9HCS5 686 aaPredicted RBP21.83■■□□□ 1.08
VPS51-204ENST00000527646 GOLGA8BA8MQT2 603 aa21.82■■□□□ 1.08
VPS51-204ENST00000527646 GSG1L2A8MUP6 293 aa21.82■■□□□ 1.08
VPS51-204ENST00000527646 MIGA1Q8NAN2 632 aa21.82■■□□□ 1.08
VPS51-204ENST00000527646 TDRD7Q8NHU6 1098 aaKnown RBP21.82■■□□□ 1.08
VPS51-204ENST00000527646 CNNM2Q9H8M5 875 aa21.82■■□□□ 1.08
VPS51-204ENST00000527646 CBX8Q9HC52 389 aa21.82■■□□□ 1.08
VPS51-204ENST00000527646 GPHNQ9NQX3 736 aaPredicted RBP21.82■■□□□ 1.08
VPS51-204ENST00000527646 ANGEL1Q9UNK9 670 aaKnown RBP21.82■■□□□ 1.08
VPS51-204ENST00000527646 GOLGA6L4A6NEF3 574 aa21.82■■□□□ 1.08
VPS51-204ENST00000527646 TRIM37O94972 964 aa21.82■■□□□ 1.08
VPS51-204ENST00000527646 HIBADHP31937 336 aaKnown RBP21.82■■□□□ 1.08
VPS51-204ENST00000527646 ZNF75DP51815 510 aa21.82■■□□□ 1.08
VPS51-204ENST00000527646 TAF3Q5VWG9 929 aa21.82■■□□□ 1.08
VPS51-204ENST00000527646 NAA16Q6N069 864 aaPredicted RBP21.82■■□□□ 1.08
VPS51-204ENST00000527646 TFIP11Q9UBB9 837 aaKnown RBP21.82■■□□□ 1.08
VPS51-204ENST00000527646 UBR3Q6ZT12 1888 aa21.82■■□□□ 1.08
VPS51-204ENST00000527646 EP400Q96L91 3159 aa21.82■■□□□ 1.08
VPS51-204ENST00000527646 LIG1P18858 919 aa21.81■■□□□ 1.08
VPS51-204ENST00000527646 RESTQ13127 1097 aa21.81■■□□□ 1.08
VPS51-204ENST00000527646 ANO6Q4KMQ2 910 aa21.81■■□□□ 1.08
VPS51-204ENST00000527646 TMEM87BQ96K49 555 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms