RNA–Protein interactions for RNA: ENST00000526080.1

PTPRU-209, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 424 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-209ENST00000526080 ALDH1L1O75891 902 aa17.46■□□□□ 0.39
PTPRU-209ENST00000526080 INPP5BP32019 993 aa17.46■□□□□ 0.39
PTPRU-209ENST00000526080 EXOSC9Q06265 439 aaKnown RBP17.46■□□□□ 0.39
PTPRU-209ENST00000526080 CHAF1AQ13111 956 aaPredicted RBP17.46■□□□□ 0.39
PTPRU-209ENST00000526080 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.46■□□□□ 0.39
PTPRU-209ENST00000526080 DPF3Q92784 378 aa17.46■□□□□ 0.39
PTPRU-209ENST00000526080 ZNF341Q9BYN7 854 aa17.46■□□□□ 0.39
PTPRU-209ENST00000526080 ZNF112Q9UJU3 913 aa17.46■□□□□ 0.39
PTPRU-209ENST00000526080 MYPNQ86TC9 1320 aa17.46■□□□□ 0.38
PTPRU-209ENST00000526080 PDHXO00330 501 aa17.45■□□□□ 0.38
PTPRU-209ENST00000526080 CCL5P13501 91 aa17.45■□□□□ 0.38
PTPRU-209ENST00000526080 RABL6Q3YEC7 729 aaPredicted RBP17.45■□□□□ 0.38
PTPRU-209ENST00000526080 DCAF15Q66K64 600 aa17.45■□□□□ 0.38
PTPRU-209ENST00000526080 TMOD2Q9NZR1 351 aa17.45■□□□□ 0.38
PTPRU-209ENST00000526080 SUGT1Q9Y2Z0 365 aa17.45■□□□□ 0.38
PTPRU-209ENST00000526080 UTYO14607 1347 aa17.45■□□□□ 0.38
PTPRU-209ENST00000526080 BCRP11274 1271 aa17.44■□□□□ 0.38
PTPRU-209ENST00000526080 HHIPL2Q6UWX4 724 aa17.44■□□□□ 0.38
PTPRU-209ENST00000526080 RAET1EQ8TD07 263 aa17.44■□□□□ 0.38
PTPRU-209ENST00000526080 HTATIP2Q9BUP3 242 aa17.44■□□□□ 0.38
PTPRU-209ENST00000526080 C9orf78Q9NZ63 289 aaPredicted RBP17.44■□□□□ 0.38
PTPRU-209ENST00000526080 MAST3O60307 1309 aa17.44■□□□□ 0.38
PTPRU-209ENST00000526080 KIF16BQ96L93 1317 aa17.44■□□□□ 0.38
PTPRU-209ENST00000526080 MGAMO43451 1857 aa17.44■□□□□ 0.38
PTPRU-209ENST00000526080 ZBTB7BO15156 539 aaPredicted RBP17.43■□□□□ 0.38
PTPRU-209ENST00000526080 ECM2O94769 699 aaPredicted RBP17.43■□□□□ 0.38
PTPRU-209ENST00000526080 NBPF7P0C2Y1 421 aaPredicted RBP17.43■□□□□ 0.38
PTPRU-209ENST00000526080 HOXD10P28358 340 aa17.43■□□□□ 0.38
PTPRU-209ENST00000526080 PRKCZQ05513 592 aa17.43■□□□□ 0.38
PTPRU-209ENST00000526080 LRRC24Q50LG9 513 aa17.43■□□□□ 0.38
PTPRU-209ENST00000526080 NOL9Q5SY16 702 aaKnown RBP17.43■□□□□ 0.38
PTPRU-209ENST00000526080 MIGA2Q7L4E1 593 aa17.43■□□□□ 0.38
PTPRU-209ENST00000526080 VPS37DQ86XT2 251 aa17.43■□□□□ 0.38
PTPRU-209ENST00000526080 WDR63Q8IWG1 891 aa17.43■□□□□ 0.38
PTPRU-209ENST00000526080 A0A1W2PPC1 479 aa17.42■□□□□ 0.38
PTPRU-209ENST00000526080 PDE8BO95263 885 aa17.42■□□□□ 0.38
PTPRU-209ENST00000526080 FMNL1O95466 1100 aaPredicted RBP17.42■□□□□ 0.38
PTPRU-209ENST00000526080 BCAMP50895 628 aa17.42■□□□□ 0.38
PTPRU-209ENST00000526080 CAVIN4Q5BKX8 364 aa17.42■□□□□ 0.38
PTPRU-209ENST00000526080 GPAT2Q6NUI2 795 aa17.42■□□□□ 0.38
PTPRU-209ENST00000526080 ANKRD44Q8N8A2 993 aa17.42■□□□□ 0.38
PTPRU-209ENST00000526080 FAM151AQ8WW52 585 aa17.42■□□□□ 0.38
PTPRU-209ENST00000526080 SRCIN1Q9C0H9 1055 aa17.42■□□□□ 0.38
PTPRU-209ENST00000526080 RNF208Q9H0X6 261 aa17.42■□□□□ 0.38
PTPRU-209ENST00000526080 CUL9Q8IWT3 2517 aa17.42■□□□□ 0.38
PTPRU-209ENST00000526080 ATRNL1Q5VV63 1379 aa17.41■□□□□ 0.38
PTPRU-209ENST00000526080 FGFR2P21802 821 aa17.41■□□□□ 0.38
PTPRU-209ENST00000526080 SLAIN1Q8ND83 568 aa17.41■□□□□ 0.38
PTPRU-209ENST00000526080 U2AF1L4Q8WU68 220 aaKnown RBP17.41■□□□□ 0.38
PTPRU-209ENST00000526080 PARK7Q99497 189 aaKnown RBP17.41■□□□□ 0.38
PTPRU-209ENST00000526080 BICC1Q9H694 974 aaKnown RBP17.41■□□□□ 0.38
PTPRU-209ENST00000526080 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
PTPRU-209ENST00000526080 LAMA2P24043 3122 aaKnown RBP17.4■□□□□ 0.38
PTPRU-209ENST00000526080 FRAT2O75474 233 aaPredicted RBP17.4■□□□□ 0.38
PTPRU-209ENST00000526080 FARP2O94887 1054 aaPredicted RBP17.4■□□□□ 0.38
PTPRU-209ENST00000526080 UBXN2AP68543 259 aa17.4■□□□□ 0.38
PTPRU-209ENST00000526080 METTL24Q5JXM2 366 aa17.4■□□□□ 0.38
PTPRU-209ENST00000526080 UNC93B1Q9H1C4 597 aa17.4■□□□□ 0.38
PTPRU-209ENST00000526080 GABRQQ9UN88 632 aa17.4■□□□□ 0.38
PTPRU-209ENST00000526080 NR2E3Q9Y5X4 410 aa17.4■□□□□ 0.38
PTPRU-209ENST00000526080 MYH13Q9UKX3 1938 aa17.4■□□□□ 0.38
PTPRU-209ENST00000526080 SOX1O00570 391 aaPredicted RBP17.39■□□□□ 0.37
PTPRU-209ENST00000526080 CYP2C8P10632 490 aa17.39■□□□□ 0.37
PTPRU-209ENST00000526080 FCGRTP55899 365 aa17.39■□□□□ 0.37
PTPRU-209ENST00000526080 NFIAQ12857 509 aa17.39■□□□□ 0.37
PTPRU-209ENST00000526080 DAGLAQ9Y4D2 1042 aa17.39■□□□□ 0.37
PTPRU-209ENST00000526080 ALPK3Q96L96 1907 aa17.39■□□□□ 0.37
PTPRU-209ENST00000526080 DOCK2Q92608 1830 aa17.38■□□□□ 0.37
PTPRU-209ENST00000526080 CXCL11O14625 94 aa17.38■□□□□ 0.37
PTPRU-209ENST00000526080 SGPL1O95470 568 aa17.38■□□□□ 0.37
PTPRU-209ENST00000526080 CDC42EP5Q6NZY7 148 aa17.38■□□□□ 0.37
PTPRU-209ENST00000526080 SLC4A10Q6U841 1118 aa17.38■□□□□ 0.37
PTPRU-209ENST00000526080 FAM198AQ9UFP1 575 aa17.38■□□□□ 0.37
PTPRU-209ENST00000526080 PTPRFP10586 1907 aa17.37■□□□□ 0.37
PTPRU-209ENST00000526080 A0A0G2JLL6 359 aaPredicted RBP17.37■□□□□ 0.37
PTPRU-209ENST00000526080 DLL1O00548 723 aa17.37■□□□□ 0.37
PTPRU-209ENST00000526080 PUM3Q15397 648 aaKnown RBP17.37■□□□□ 0.37
PTPRU-209ENST00000526080 PRRT2Q7Z6L0 340 aaPredicted RBP17.37■□□□□ 0.37
PTPRU-209ENST00000526080 RFX7Q2KHR2 1363 aa17.37■□□□□ 0.37
PTPRU-209ENST00000526080 PHF20L1A8MW92 1017 aa17.36■□□□□ 0.37
PTPRU-209ENST00000526080 CAPN2P17655 700 aa17.36■□□□□ 0.37
PTPRU-209ENST00000526080 DIXDC1Q155Q3 683 aa17.36■□□□□ 0.37
PTPRU-209ENST00000526080 SLC17A8Q8NDX2 589 aa17.36■□□□□ 0.37
PTPRU-209ENST00000526080 KLHDC4Q8TBB5 520 aa17.36■□□□□ 0.37
PTPRU-209ENST00000526080 PXYLP1Q8TE99 480 aa17.36■□□□□ 0.37
PTPRU-209ENST00000526080 PAK6Q9NQU5 681 aaPredicted RBP17.36■□□□□ 0.37
PTPRU-209ENST00000526080 BIN2Q9UBW5 565 aaPredicted RBP17.36■□□□□ 0.37
PTPRU-209ENST00000526080 VCANP13611 3396 aa17.36■□□□□ 0.37
PTPRU-209ENST00000526080 PHIPQ8WWQ0 1821 aa17.35■□□□□ 0.37
PTPRU-209ENST00000526080 ADCY3O60266 1144 aa17.35■□□□□ 0.37
PTPRU-209ENST00000526080 INHAP05111 366 aa17.35■□□□□ 0.37
PTPRU-209ENST00000526080 TCP10Q12799 353 aa17.35■□□□□ 0.37
PTPRU-209ENST00000526080 IRF5Q13568 498 aa17.35■□□□□ 0.37
PTPRU-209ENST00000526080 WDR66Q8TBY9 1149 aa17.35■□□□□ 0.37
PTPRU-209ENST00000526080 LRCH3Q96II8 777 aa17.35■□□□□ 0.37
PTPRU-209ENST00000526080 CRISPLD2Q9H0B8 497 aa17.35■□□□□ 0.37
PTPRU-209ENST00000526080 SLC45A1Q9Y2W3 748 aa17.35■□□□□ 0.37
PTPRU-209ENST00000526080 SPTBN5Q9NRC6 3674 aaKnown RBP17.35■□□□□ 0.37
PTPRU-209ENST00000526080 IFIT1P09914 478 aaKnown RBP17.34■□□□□ 0.37
PTPRU-209ENST00000526080 ELNP15502 786 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms