RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 YTHDC1Q96MU7 727 aaKnown RBP20.92■□□□□ 0.94
CCS-203ENST00000526058 IREB2P48200 963 aaKnown RBP20.91■□□□□ 0.94
CCS-203ENST00000526058 SPTY2D1Q68D10 685 aaPredicted RBP20.91■□□□□ 0.94
CCS-203ENST00000526058 FAM83AQ86UY5 434 aa20.91■□□□□ 0.94
CCS-203ENST00000526058 DZIP1Q86YF9 867 aaKnown RBP20.91■□□□□ 0.94
CCS-203ENST00000526058 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.91■□□□□ 0.94
CCS-203ENST00000526058 EAF2Q96CJ1 260 aaPredicted RBP20.91■□□□□ 0.94
CCS-203ENST00000526058 SLC10A4Q96EP9 437 aa20.91■□□□□ 0.94
CCS-203ENST00000526058 CCDC8Q9H0W5 538 aaPredicted RBP20.91■□□□□ 0.94
CCS-203ENST00000526058 USP40Q9NVE5 1235 aa20.91■□□□□ 0.94
CCS-203ENST00000526058 RNF186Q9NXI6 227 aa20.91■□□□□ 0.94
CCS-203ENST00000526058 TLR7Q9NYK1 1049 aaKnown RBP20.91■□□□□ 0.94
CCS-203ENST00000526058 CASP8AP2Q9UKL3 1982 aa20.91■□□□□ 0.94
CCS-203ENST00000526058 TRPA1O75762 1119 aa20.9■□□□□ 0.94
CCS-203ENST00000526058 UQCRFS1P1P0C7P4 283 aa20.9■□□□□ 0.94
CCS-203ENST00000526058 NFIAQ12857 509 aa20.9■□□□□ 0.94
CCS-203ENST00000526058 CCDC158Q5M9N0 1113 aa20.9■□□□□ 0.94
CCS-203ENST00000526058 TTC39AQ5SRH9 613 aa20.9■□□□□ 0.94
CCS-203ENST00000526058 SPRYD7Q5W111 196 aa20.9■□□□□ 0.94
CCS-203ENST00000526058 ERICH6Q7L0X2 663 aa20.9■□□□□ 0.94
CCS-203ENST00000526058 RPAP2Q8IXW5 612 aaPredicted RBP20.9■□□□□ 0.94
CCS-203ENST00000526058 ZNF384Q8TF68 577 aa20.9■□□□□ 0.94
CCS-203ENST00000526058 SNRKQ9NRH2 765 aa20.9■□□□□ 0.94
CCS-203ENST00000526058 DBNLQ9UJU6 430 aaKnown RBP20.9■□□□□ 0.94
CCS-203ENST00000526058 AK9Q5TCS8 1911 aa20.9■□□□□ 0.94
CCS-203ENST00000526058 GAKO14976 1311 aa20.89■□□□□ 0.93
CCS-203ENST00000526058 MECOMQ03112 1051 aa20.89■□□□□ 0.93
CCS-203ENST00000526058 MYO5AQ9Y4I1 1855 aaKnown RBP20.88■□□□□ 0.93
CCS-203ENST00000526058 TCP10Q12799 353 aa20.88■□□□□ 0.93
CCS-203ENST00000526058 REM2Q8IYK8 340 aaPredicted RBP20.88■□□□□ 0.93
CCS-203ENST00000526058 ANKRD13AQ8IZ07 590 aa20.88■□□□□ 0.93
CCS-203ENST00000526058 CHMP4BQ9H444 224 aaKnown RBP20.88■□□□□ 0.93
CCS-203ENST00000526058 FAM198AQ9UFP1 575 aa20.88■□□□□ 0.93
CCS-203ENST00000526058 UNCXA6NJT0 531 aa20.87■□□□□ 0.93
CCS-203ENST00000526058 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.87■□□□□ 0.93
CCS-203ENST00000526058 ERC1Q8IUD2 1116 aa20.87■□□□□ 0.93
CCS-203ENST00000526058 FAM151AQ8WW52 585 aa20.87■□□□□ 0.93
CCS-203ENST00000526058 NSUN4Q96CB9 384 aaKnown RBP20.87■□□□□ 0.93
CCS-203ENST00000526058 FAM163AQ96GL9 167 aaPredicted RBP20.87■□□□□ 0.93
CCS-203ENST00000526058 WNK4Q96J92 1243 aa20.87■□□□□ 0.93
CCS-203ENST00000526058 SAGE1Q9NXZ1 904 aa20.87■□□□□ 0.93
CCS-203ENST00000526058 RAI14Q9P0K7 980 aa20.87■□□□□ 0.93
CCS-203ENST00000526058 RPAP1Q9BWH6 1393 aaPredicted RBP20.86■□□□□ 0.93
CCS-203ENST00000526058 MROH7-TTC4A0A0A0MT08 1334 aa20.86■□□□□ 0.93
CCS-203ENST00000526058 TM4SF4P48230 202 aa20.86■□□□□ 0.93
CCS-203ENST00000526058 ZFPM1Q8IX07 1006 aa20.86■□□□□ 0.93
CCS-203ENST00000526058 SLF2Q8IX21 1173 aa20.86■□□□□ 0.93
CCS-203ENST00000526058 RHPN1Q8TCX5 695 aa20.86■□□□□ 0.93
CCS-203ENST00000526058 ZNF512BQ96KM6 892 aaPredicted RBP20.86■□□□□ 0.93
CCS-203ENST00000526058 ELP3Q9H9T3 547 aa20.86■□□□□ 0.93
CCS-203ENST00000526058 IL1RAPL2Q9NP60 686 aa20.86■□□□□ 0.93
CCS-203ENST00000526058 APBB1O00213 710 aa20.85■□□□□ 0.93
CCS-203ENST00000526058 HMMRO75330 724 aa20.85■□□□□ 0.93
CCS-203ENST00000526058 GJA5P36382 358 aa20.85■□□□□ 0.93
CCS-203ENST00000526058 BTDP43251 543 aa20.85■□□□□ 0.93
CCS-203ENST00000526058 MAP3K9P80192 1104 aa20.85■□□□□ 0.93
CCS-203ENST00000526058 HSP90AB4PQ58FF6 505 aa20.85■□□□□ 0.93
CCS-203ENST00000526058 MIGA2Q7L4E1 593 aa20.85■□□□□ 0.93
CCS-203ENST00000526058 AACSQ86V21 672 aa20.85■□□□□ 0.93
CCS-203ENST00000526058 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.85■□□□□ 0.936e-6■□□□□ 9
CCS-203ENST00000526058 LRP2BPQ9P2M1 347 aa20.85■□□□□ 0.93
CCS-203ENST00000526058 GPR75-ASB3A0A0A6YYF3 556 aa20.84■□□□□ 0.93
CCS-203ENST00000526058 CYP2E1P05181 493 aaPredicted RBP20.84■□□□□ 0.93
CCS-203ENST00000526058 ZBTB48P10074 688 aaPredicted RBP20.84■□□□□ 0.93
CCS-203ENST00000526058 ZAP70P43403 619 aa20.84■□□□□ 0.93
CCS-203ENST00000526058 RGS3P49796 1198 aa20.84■□□□□ 0.93
CCS-203ENST00000526058 LAMB1P07942 1786 aa20.83■□□□□ 0.93
CCS-203ENST00000526058 GSTO1P78417 241 aa20.83■□□□□ 0.93
CCS-203ENST00000526058 SREBF2Q12772 1141 aa20.83■□□□□ 0.93
CCS-203ENST00000526058 VGLL4Q14135 290 aa20.83■□□□□ 0.93
CCS-203ENST00000526058 CNKSR2Q8WXI2 1034 aa20.83■□□□□ 0.93
CCS-203ENST00000526058 IDI2Q9BXS1 227 aa20.83■□□□□ 0.93
CCS-203ENST00000526058 RFX7Q2KHR2 1363 aa20.83■□□□□ 0.92
CCS-203ENST00000526058 WDHD1O75717 1129 aaPredicted RBP20.82■□□□□ 0.92
CCS-203ENST00000526058 LDHCP07864 332 aa20.82■□□□□ 0.92
CCS-203ENST00000526058 RHBDL3P58872 404 aa20.82■□□□□ 0.92
CCS-203ENST00000526058 OPTNQ96CV9 577 aa20.82■□□□□ 0.92
CCS-203ENST00000526058 HOOK2Q96ED9 719 aa20.82■□□□□ 0.92
CCS-203ENST00000526058 KIF1BPQ96EK5 621 aa20.82■□□□□ 0.92
CCS-203ENST00000526058 DDX4Q9NQI0 724 aaKnown RBP20.82■□□□□ 0.92
CCS-203ENST00000526058 MANSC4A6NHS7 340 aaPredicted RBP20.81■□□□□ 0.92
CCS-203ENST00000526058 TBC1D8O95759 1140 aa20.81■□□□□ 0.92
CCS-203ENST00000526058 DCAF15Q66K64 600 aa20.81■□□□□ 0.92
CCS-203ENST00000526058 ZKSCAN4Q969J2 545 aaPredicted RBP20.81■□□□□ 0.92
CCS-203ENST00000526058 WRNIP1Q96S55 665 aa20.81■□□□□ 0.92
CCS-203ENST00000526058 BCL11AQ9H165 835 aa20.81■□□□□ 0.92
CCS-203ENST00000526058 PIH1D3Q9NQM4 214 aaKnown RBP20.81■□□□□ 0.92
CCS-203ENST00000526058 NDUFB9Q9Y6M9 179 aa20.81■□□□□ 0.92
CCS-203ENST00000526058 MAST2Q6P0Q8 1798 aa20.81■□□□□ 0.92
CCS-203ENST00000526058 ENTPD3O75355 529 aa20.8■□□□□ 0.92
CCS-203ENST00000526058 CAPN15O75808 1086 aa20.8■□□□□ 0.92
CCS-203ENST00000526058 PICALMQ13492 652 aa20.8■□□□□ 0.92
CCS-203ENST00000526058 SH3BP5LQ7L8J4 393 aa20.8■□□□□ 0.92
CCS-203ENST00000526058 ZNF341Q9BYN7 854 aa20.8■□□□□ 0.92
CCS-203ENST00000526058 CSADQ9Y600 493 aa20.8■□□□□ 0.92
CCS-203ENST00000526058 SNCAIPQ9Y6H5 919 aa20.8■□□□□ 0.92
CCS-203ENST00000526058 DOCK2Q92608 1830 aa20.8■□□□□ 0.92
CCS-203ENST00000526058 RAB11FIP3O75154 756 aa20.79■□□□□ 0.92
CCS-203ENST00000526058 INHBEP58166 350 aa20.79■□□□□ 0.92
CCS-203ENST00000526058 NAA16Q6N069 864 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms