RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 OPTNQ96CV9 577 aa14.37□□□□□ -0.11
HIF3A-209ENST00000525854 NEUROD6Q96NK8 337 aa14.37□□□□□ -0.11
HIF3A-209ENST00000525854 ELP3Q9H9T3 547 aa14.37□□□□□ -0.11
HIF3A-209ENST00000525854 RPAP1Q9BWH6 1393 aaPredicted RBP14.36□□□□□ -0.11
HIF3A-209ENST00000525854 VGLL4Q14135 290 aa14.36□□□□□ -0.11
HIF3A-209ENST00000525854 PKN2Q16513 984 aaKnown RBP14.36□□□□□ -0.11
HIF3A-209ENST00000525854 CDC42EP5Q6NZY7 148 aa14.36□□□□□ -0.11
HIF3A-209ENST00000525854 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.36□□□□□ -0.11
HIF3A-209ENST00000525854 DZIP1Q86YF9 867 aaKnown RBP14.36□□□□□ -0.11
HIF3A-209ENST00000525854 ITPRIPQ8IWB1 547 aa14.36□□□□□ -0.11
HIF3A-209ENST00000525854 FAM151AQ8WW52 585 aa14.36□□□□□ -0.11
HIF3A-209ENST00000525854 FKTNO75072 461 aa14.35□□□□□ -0.11
HIF3A-209ENST00000525854 GJA5P36382 358 aa14.35□□□□□ -0.11
HIF3A-209ENST00000525854 WRNIP1Q96S55 665 aa14.35□□□□□ -0.11
HIF3A-209ENST00000525854 USP40Q9NVE5 1235 aa14.35□□□□□ -0.11
HIF3A-209ENST00000525854 ABCF2Q9UG63 623 aa14.35□□□□□ -0.11
HIF3A-209ENST00000525854 TESPA1A2RU30 521 aaPredicted RBP14.34□□□□□ -0.11
HIF3A-209ENST00000525854 IGF2BP3O00425 579 aaKnown RBP eCLIP14.34□□□□□ -0.11
HIF3A-209ENST00000525854 GTF2A2P52657 109 aa14.34□□□□□ -0.11
HIF3A-209ENST00000525854 ATP8B2P98198 1209 aa14.34□□□□□ -0.11
HIF3A-209ENST00000525854 OS9Q13438 667 aaPredicted RBP14.34□□□□□ -0.11
HIF3A-209ENST00000525854 POLA2Q14181 598 aa14.34□□□□□ -0.11
HIF3A-209ENST00000525854 SSH3Q8TE77 659 aa14.34□□□□□ -0.11
HIF3A-209ENST00000525854 ZNF341Q9BYN7 854 aa14.34□□□□□ -0.11
HIF3A-209ENST00000525854 GAKO14976 1311 aa14.34□□□□□ -0.11
HIF3A-209ENST00000525854 MYH13Q9UKX3 1938 aa14.33□□□□□ -0.11
HIF3A-209ENST00000525854 SPDYE5A6NIY4 337 aa14.33□□□□□ -0.12
HIF3A-209ENST00000525854 ZBTB7BO15156 539 aaPredicted RBP14.33□□□□□ -0.12
HIF3A-209ENST00000525854 UQCRFS1P1P0C7P4 283 aa14.33□□□□□ -0.12
HIF3A-209ENST00000525854 MS4A1P11836 297 aa14.33□□□□□ -0.12
HIF3A-209ENST00000525854 TCP10Q12799 353 aa14.33□□□□□ -0.12
HIF3A-209ENST00000525854 ERICH6Q7L0X2 663 aa14.33□□□□□ -0.12
HIF3A-209ENST00000525854 SPATA5Q8NB90 893 aa14.33□□□□□ -0.12
HIF3A-209ENST00000525854 OTUD5Q96G74 571 aa14.33□□□□□ -0.12
HIF3A-209ENST00000525854 FAM163AQ96GL9 167 aaPredicted RBP14.33□□□□□ -0.12
HIF3A-209ENST00000525854 GPR108Q9NPR9 543 aa14.33□□□□□ -0.12
HIF3A-209ENST00000525854 SURF6O75683 361 aaKnown RBP14.32□□□□□ -0.12
HIF3A-209ENST00000525854 RLBP1P12271 317 aa14.32□□□□□ -0.12
HIF3A-209ENST00000525854 GSTO1P78417 241 aa14.32□□□□□ -0.12
HIF3A-209ENST00000525854 NFIAQ12857 509 aa14.32□□□□□ -0.12
HIF3A-209ENST00000525854 MIGA2Q7L4E1 593 aa14.32□□□□□ -0.12
HIF3A-209ENST00000525854 ERO1BQ86YB8 467 aa14.32□□□□□ -0.12
HIF3A-209ENST00000525854 MS4A4AQ96JQ5 239 aa14.32□□□□□ -0.12
HIF3A-209ENST00000525854 IDI2Q9BXS1 227 aa14.32□□□□□ -0.12
HIF3A-209ENST00000525854 R3HDMLQ9H3Y0 253 aa14.32□□□□□ -0.12
HIF3A-209ENST00000525854 HMG20BQ9P0W2 317 aa14.32□□□□□ -0.12
HIF3A-209ENST00000525854 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.32□□□□□ -0.12
HIF3A-209ENST00000525854 CCL15-CCL14A0A0B4J2E2 113 aa14.31□□□□□ -0.12
HIF3A-209ENST00000525854 ENTPD3O75355 529 aa14.31□□□□□ -0.12
HIF3A-209ENST00000525854 WDHD1O75717 1129 aaPredicted RBP14.31□□□□□ -0.12
HIF3A-209ENST00000525854 ARID4AP29374 1257 aaPredicted RBP14.31□□□□□ -0.12
HIF3A-209ENST00000525854 RGS19P49795 217 aa14.31□□□□□ -0.12
HIF3A-209ENST00000525854 CCL15Q16663 113 aa14.31□□□□□ -0.12
HIF3A-209ENST00000525854 CNKSR2Q8WXI2 1034 aa14.31□□□□□ -0.12
HIF3A-209ENST00000525854 ZKSCAN4Q969J2 545 aaPredicted RBP14.31□□□□□ -0.12
HIF3A-209ENST00000525854 PTPN18Q99952 460 aa14.31□□□□□ -0.12
HIF3A-209ENST00000525854 C1orf115Q9H7X2 142 aa14.31□□□□□ -0.12
HIF3A-209ENST00000525854 FAM198AQ9UFP1 575 aa14.31□□□□□ -0.12
HIF3A-209ENST00000525854 SNCAIPQ9Y6H5 919 aa14.31□□□□□ -0.12
HIF3A-209ENST00000525854 LDHCP07864 332 aa14.3□□□□□ -0.12
HIF3A-209ENST00000525854 CETPP11597 493 aa14.3□□□□□ -0.12
HIF3A-209ENST00000525854 BTDP43251 543 aa14.3□□□□□ -0.12
HIF3A-209ENST00000525854 MECOMQ03112 1051 aa14.3□□□□□ -0.12
HIF3A-209ENST00000525854 CRHR2Q13324 411 aa14.3□□□□□ -0.12
HIF3A-209ENST00000525854 PPIL2Q13356 520 aa14.3□□□□□ -0.12
HIF3A-209ENST00000525854 SNAPC2Q13487 334 aa14.3□□□□□ -0.12
HIF3A-209ENST00000525854 TNNI3KQ59H18 835 aa14.3□□□□□ -0.12
HIF3A-209ENST00000525854 CCDC158Q5M9N0 1113 aa14.3□□□□□ -0.12
HIF3A-209ENST00000525854 BRI3BPQ8WY22 251 aa14.3□□□□□ -0.12
HIF3A-209ENST00000525854 ZNF112Q9UJU3 913 aa14.3□□□□□ -0.12
HIF3A-209ENST00000525854 NOP58Q9Y2X3 529 aaKnown RBP14.3□□□□□ -0.12
HIF3A-209ENST00000525854 FPGT-TNNI3KV9GXZ4 949 aa14.3□□□□□ -0.12
HIF3A-209ENST00000525854 MROH7-TTC4A0A0A0MT08 1334 aa14.3□□□□□ -0.12
HIF3A-209ENST00000525854 GPR75-ASB3A0A0A6YYF3 556 aa14.29□□□□□ -0.12
HIF3A-209ENST00000525854 MAP4K4O95819 1239 aaPredicted RBP14.29□□□□□ -0.12
HIF3A-209ENST00000525854 RGS3P49796 1198 aa14.29□□□□□ -0.12
HIF3A-209ENST00000525854 PPATQ06203 517 aa14.29□□□□□ -0.12
HIF3A-209ENST00000525854 TTC39AQ5SRH9 613 aa14.29□□□□□ -0.12
HIF3A-209ENST00000525854 FBXO46Q6PJ61 603 aaPredicted RBP14.29□□□□□ -0.12
HIF3A-209ENST00000525854 ZSCAN29Q8IWY8 852 aaPredicted RBP14.29□□□□□ -0.12
HIF3A-209ENST00000525854 ERO1AQ96HE7 468 aa14.29□□□□□ -0.12
HIF3A-209ENST00000525854 ZFYVE28Q9HCC9 887 aa14.29□□□□□ -0.12
HIF3A-209ENST00000525854 ZCCHC17Q9NP64 241 aaKnown RBP14.29□□□□□ -0.12
HIF3A-209ENST00000525854 RAI14Q9P0K7 980 aa14.29□□□□□ -0.12
HIF3A-209ENST00000525854 HPS5Q9UPZ3 1129 aa14.29□□□□□ -0.12
HIF3A-209ENST00000525854 OTOFQ9HC10 1997 aa14.29□□□□□ -0.12
HIF3A-209ENST00000525854 IRF6O14896 467 aa14.28□□□□□ -0.12
HIF3A-209ENST00000525854 MCAMP43121 646 aa14.28□□□□□ -0.12
HIF3A-209ENST00000525854 MLLT1Q03111 559 aaPredicted RBP14.28□□□□□ -0.12
HIF3A-209ENST00000525854 TAF1CQ15572 869 aaPredicted RBP14.28□□□□□ -0.12
HIF3A-209ENST00000525854 PI16Q6UXB8 463 aa14.28□□□□□ -0.12
HIF3A-209ENST00000525854 TBC1D9Q6ZT07 1266 aa14.28□□□□□ -0.12
HIF3A-209ENST00000525854 PANK1Q8TE04 598 aa14.28□□□□□ -0.12
HIF3A-209ENST00000525854 NSUN4Q96CB9 384 aaKnown RBP14.28□□□□□ -0.12
HIF3A-209ENST00000525854 LRP2BPQ9P2M1 347 aa14.28□□□□□ -0.12
HIF3A-209ENST00000525854 LAMB1P07942 1786 aa14.27□□□□□ -0.12
HIF3A-209ENST00000525854 RFX7Q2KHR2 1363 aa14.27□□□□□ -0.12
HIF3A-209ENST00000525854 IGSF3O75054 1194 aa14.27□□□□□ -0.13
HIF3A-209ENST00000525854 NPM3O75607 178 aaKnown RBP14.27□□□□□ -0.13
HIF3A-209ENST00000525854 INPP5BP32019 993 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms