RNA–Protein interactions for RNA: ENST00000525617.2

LRRK1-204, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-204ENST00000525617 SNRKQ9NRH2 765 aa17.62■□□□□ 0.41
LRRK1-204ENST00000525617 WBP1LQ9NX94 342 aa17.62■□□□□ 0.41
LRRK1-204ENST00000525617 TLR7Q9NYK1 1049 aaKnown RBP17.62■□□□□ 0.41
LRRK1-204ENST00000525617 THSD7BQ9C0I4 1608 aa17.61■□□□□ 0.41
LRRK1-204ENST00000525617 SLC10A3P09131 477 aa17.61■□□□□ 0.41
LRRK1-204ENST00000525617 IFIT2P09913 472 aaKnown RBP17.61■□□□□ 0.41
LRRK1-204ENST00000525617 IREB2P48200 963 aaKnown RBP17.61■□□□□ 0.41
LRRK1-204ENST00000525617 MECOMQ03112 1051 aa17.61■□□□□ 0.41
LRRK1-204ENST00000525617 CDC42EP5Q6NZY7 148 aa17.61■□□□□ 0.41
LRRK1-204ENST00000525617 FAM163AQ96GL9 167 aaPredicted RBP17.61■□□□□ 0.41
LRRK1-204ENST00000525617 TMEM39BQ9GZU3 492 aa17.61■□□□□ 0.41
LRRK1-204ENST00000525617 USP40Q9NVE5 1235 aa17.61■□□□□ 0.41
LRRK1-204ENST00000525617 FAM155AB1AL88 458 aaPredicted RBP17.6■□□□□ 0.41
LRRK1-204ENST00000525617 IGSF3O75054 1194 aa17.6■□□□□ 0.41
LRRK1-204ENST00000525617 MAP3K11Q16584 847 aa17.6■□□□□ 0.41
LRRK1-204ENST00000525617 MROH7-TTC4A0A0A0MT08 1334 aa17.6■□□□□ 0.41
LRRK1-204ENST00000525617 GAKO14976 1311 aa17.6■□□□□ 0.41
LRRK1-204ENST00000525617 UNCXA6NJT0 531 aa17.59■□□□□ 0.41
LRRK1-204ENST00000525617 ZAP70P43403 619 aa17.59■□□□□ 0.41
LRRK1-204ENST00000525617 LDLRAD1Q5T700 205 aa17.59■□□□□ 0.41
LRRK1-204ENST00000525617 RASAL3Q86YV0 1011 aa17.59■□□□□ 0.41
LRRK1-204ENST00000525617 FAM151AQ8WW52 585 aa17.59■□□□□ 0.41
LRRK1-204ENST00000525617 NSUN4Q96CB9 384 aaKnown RBP17.59■□□□□ 0.41
LRRK1-204ENST00000525617 TEPSINQ96N21 525 aa17.59■□□□□ 0.41
LRRK1-204ENST00000525617 NOL10Q9BSC4 688 aaKnown RBP17.59■□□□□ 0.41
LRRK1-204ENST00000525617 LRRCC1Q9C099 1032 aa17.59■□□□□ 0.41
LRRK1-204ENST00000525617 AKAP11Q9UKA4 1901 aa17.59■□□□□ 0.41
LRRK1-204ENST00000525617 SSC5DA1L4H1 1573 aa17.58■□□□□ 0.41
LRRK1-204ENST00000525617 CYP2E1P05181 493 aaPredicted RBP17.58■□□□□ 0.4
LRRK1-204ENST00000525617 BTDP43251 543 aa17.58■□□□□ 0.4
LRRK1-204ENST00000525617 KIF23Q02241 960 aaPredicted RBP17.58■□□□□ 0.4
LRRK1-204ENST00000525617 REM2Q8IYK8 340 aaPredicted RBP17.58■□□□□ 0.4
LRRK1-204ENST00000525617 SLC10A4Q96EP9 437 aa17.58■□□□□ 0.4
LRRK1-204ENST00000525617 CRBNQ96SW2 442 aa17.58■□□□□ 0.4
LRRK1-204ENST00000525617 FZD1Q9UP38 647 aa17.58■□□□□ 0.4
LRRK1-204ENST00000525617 GPR75-ASB3A0A0A6YYF3 556 aa17.57■□□□□ 0.4
LRRK1-204ENST00000525617 FOXN1O15353 648 aa17.57■□□□□ 0.4
LRRK1-204ENST00000525617 USP2O75604 605 aaPredicted RBP17.57■□□□□ 0.4
LRRK1-204ENST00000525617 CTCFP49711 727 aaPredicted RBP17.57■□□□□ 0.4
LRRK1-204ENST00000525617 TCP10Q12799 353 aa17.57■□□□□ 0.4
LRRK1-204ENST00000525617 NAA16Q6N069 864 aaPredicted RBP17.57■□□□□ 0.4
LRRK1-204ENST00000525617 ANKRD13AQ8IZ07 590 aa17.57■□□□□ 0.4
LRRK1-204ENST00000525617 RPAP1Q9BWH6 1393 aaPredicted RBP17.56■□□□□ 0.4
LRRK1-204ENST00000525617 CA12O43570 354 aa17.56■□□□□ 0.4
LRRK1-204ENST00000525617 MAP4K4O95819 1239 aaPredicted RBP17.56■□□□□ 0.4
LRRK1-204ENST00000525617 DCAF15Q66K64 600 aa17.56■□□□□ 0.4
LRRK1-204ENST00000525617 CDAN1Q8IWY9 1227 aa17.56■□□□□ 0.4
LRRK1-204ENST00000525617 ZIC5Q96T25 663 aa17.56■□□□□ 0.4
LRRK1-204ENST00000525617 IDI2Q9BXS1 227 aa17.56■□□□□ 0.4
LRRK1-204ENST00000525617 DCTPP1Q9H773 170 aa17.56■□□□□ 0.4
LRRK1-204ENST00000525617 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.56■□□□□ 0.4
LRRK1-204ENST00000525617 AK9Q5TCS8 1911 aa17.55■□□□□ 0.4
LRRK1-204ENST00000525617 ENTPD3O75355 529 aa17.55■□□□□ 0.4
LRRK1-204ENST00000525617 BAG3O95817 575 aa17.55■□□□□ 0.4
LRRK1-204ENST00000525617 NFIAQ12857 509 aa17.55■□□□□ 0.4
LRRK1-204ENST00000525617 AAMPQ13685 434 aa17.55■□□□□ 0.4
LRRK1-204ENST00000525617 TTF1Q15361 905 aaPredicted RBP17.55■□□□□ 0.4
LRRK1-204ENST00000525617 ZNF384Q8TF68 577 aa17.55■□□□□ 0.4
LRRK1-204ENST00000525617 PCDHB15Q9Y5E8 787 aa17.55■□□□□ 0.4
LRRK1-204ENST00000525617 IDH1O75874 414 aaKnown RBP17.54■□□□□ 0.4
LRRK1-204ENST00000525617 RGS3P49796 1198 aa17.54■□□□□ 0.4
LRRK1-204ENST00000525617 MAP3K12Q12852 859 aa17.54■□□□□ 0.4
LRRK1-204ENST00000525617 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.54■□□□□ 0.4
LRRK1-204ENST00000525617 PIH1D3Q9NQM4 214 aaKnown RBP17.54■□□□□ 0.4
LRRK1-204ENST00000525617 FAM198AQ9UFP1 575 aa17.54■□□□□ 0.4
LRRK1-204ENST00000525617 MAST2Q6P0Q8 1798 aa17.53■□□□□ 0.4
LRRK1-204ENST00000525617 PLCG2P16885 1265 aa17.53■□□□□ 0.4
LRRK1-204ENST00000525617 MAP3K9P80192 1104 aa17.53■□□□□ 0.4
LRRK1-204ENST00000525617 PICALMQ13492 652 aa17.53■□□□□ 0.4
LRRK1-204ENST00000525617 SPRYD7Q5W111 196 aa17.53■□□□□ 0.4
LRRK1-204ENST00000525617 ZSCAN29Q8IWY8 852 aaPredicted RBP17.53■□□□□ 0.4
LRRK1-204ENST00000525617 CLMNQ96JQ2 1002 aa17.53■□□□□ 0.4
LRRK1-204ENST00000525617 CSRNP1Q96S65 589 aa17.53■□□□□ 0.4
LRRK1-204ENST00000525617 CSADQ9Y600 493 aa17.53■□□□□ 0.4
LRRK1-204ENST00000525617 SMARCA5O60264 1052 aaPredicted RBP17.52■□□□□ 0.4
LRRK1-204ENST00000525617 WDHD1O75717 1129 aaPredicted RBP17.52■□□□□ 0.4
LRRK1-204ENST00000525617 ZBTB48P10074 688 aaPredicted RBP17.52■□□□□ 0.4
LRRK1-204ENST00000525617 LBX1P52954 281 aa17.52■□□□□ 0.4
LRRK1-204ENST00000525617 RHBDL3P58872 404 aa17.52■□□□□ 0.4
LRRK1-204ENST00000525617 SREBF2Q12772 1141 aa17.52■□□□□ 0.4
LRRK1-204ENST00000525617 MKRN3Q13064 507 aaKnown RBP17.52■□□□□ 0.4
LRRK1-204ENST00000525617 TMED8Q6PL24 325 aaPredicted RBP17.52■□□□□ 0.4
LRRK1-204ENST00000525617 ZNF341Q9BYN7 854 aa17.52■□□□□ 0.4
LRRK1-204ENST00000525617 NDUFB9Q9Y6M9 179 aa17.52■□□□□ 0.4
LRRK1-204ENST00000525617 NPM3O75607 178 aaKnown RBP17.51■□□□□ 0.39
LRRK1-204ENST00000525617 ATP5JP18859 108 aa17.51■□□□□ 0.39
LRRK1-204ENST00000525617 CYP7A1P22680 504 aa17.51■□□□□ 0.39
LRRK1-204ENST00000525617 MIGA2Q7L4E1 593 aa17.51■□□□□ 0.39
LRRK1-204ENST00000525617 TEX11Q8IYF3 940 aa17.51■□□□□ 0.39
LRRK1-204ENST00000525617 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.51■□□□□ 0.39
LRRK1-204ENST00000525617 GPATCH3Q96I76 525 aa17.51■□□□□ 0.39
LRRK1-204ENST00000525617 WRNIP1Q96S55 665 aa17.51■□□□□ 0.39
LRRK1-204ENST00000525617 DNAJC2Q99543 621 aaKnown RBP17.51■□□□□ 0.39
LRRK1-204ENST00000525617 ANTXR1Q9H6X2 564 aa17.51■□□□□ 0.39
LRRK1-204ENST00000525617 PRDM10Q9NQV6 1147 aa17.51■□□□□ 0.39
LRRK1-204ENST00000525617 AATFQ9NY61 560 aaKnown RBP eCLIP17.51■□□□□ 0.39
LRRK1-204ENST00000525617 ZBTB47Q9UFB7 747 aaPredicted RBP17.51■□□□□ 0.39
LRRK1-204ENST00000525617 MYO5AQ9Y4I1 1855 aaKnown RBP17.51■□□□□ 0.39
LRRK1-204ENST00000525617 SUPT16HQ9Y5B9 1047 aaKnown RBP17.51■□□□□ 0.39
LRRK1-204ENST00000525617 MANSC4A6NHS7 340 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms