RNA–Protein interactions for RNA: ENST00000525506.1

RBBP4-216, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

TSL 2

Gene RBBP4, Length 501 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-216ENST00000525506 MYO5AQ9Y4I1 1855 aaKnown RBP12.91□□□□□ -0.34
RBBP4-216ENST00000525506 TCP10Q12799 353 aa12.91□□□□□ -0.34
RBBP4-216ENST00000525506 RASGRF1Q13972 1273 aa12.91□□□□□ -0.34
RBBP4-216ENST00000525506 CDC42EP5Q6NZY7 148 aa12.91□□□□□ -0.34
RBBP4-216ENST00000525506 CEP85Q6P2H3 762 aa12.91□□□□□ -0.34
RBBP4-216ENST00000525506 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.91□□□□□ -0.34
RBBP4-216ENST00000525506 ZNF296Q8WUU4 475 aaPredicted RBP12.91□□□□□ -0.34
RBBP4-216ENST00000525506 GPR108Q9NPR9 543 aa12.91□□□□□ -0.34
RBBP4-216ENST00000525506 ZBTB40Q9NUA8 1239 aa12.91□□□□□ -0.34
RBBP4-216ENST00000525506 MANSC4A6NHS7 340 aaPredicted RBP12.9□□□□□ -0.34
RBBP4-216ENST00000525506 GPR25O00155 361 aa12.9□□□□□ -0.34
RBBP4-216ENST00000525506 IGF2BP3O00425 579 aaKnown RBP eCLIP12.9□□□□□ -0.34
RBBP4-216ENST00000525506 ZBTB48P10074 688 aaPredicted RBP12.9□□□□□ -0.34
RBBP4-216ENST00000525506 MAP3K9P80192 1104 aa12.9□□□□□ -0.34
RBBP4-216ENST00000525506 G3BP1Q13283 466 aaKnown RBP eCLIP12.9□□□□□ -0.34
RBBP4-216ENST00000525506 VGLL4Q14135 290 aa12.9□□□□□ -0.34
RBBP4-216ENST00000525506 PI16Q6UXB8 463 aa12.9□□□□□ -0.34
RBBP4-216ENST00000525506 MIGA2Q7L4E1 593 aa12.9□□□□□ -0.34
RBBP4-216ENST00000525506 IFNL1Q8IU54 200 aa12.9□□□□□ -0.34
RBBP4-216ENST00000525506 RPAP2Q8IXW5 612 aaPredicted RBP12.9□□□□□ -0.34
RBBP4-216ENST00000525506 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.9□□□□□ -0.34
RBBP4-216ENST00000525506 OPTNQ96CV9 577 aa12.9□□□□□ -0.34
RBBP4-216ENST00000525506 SALL1Q9NSC2 1324 aa12.89□□□□□ -0.35
RBBP4-216ENST00000525506 NFIAQ12857 509 aa12.89□□□□□ -0.35
RBBP4-216ENST00000525506 CTU1Q7Z7A3 348 aaKnown RBP12.89□□□□□ -0.35
RBBP4-216ENST00000525506 FAM83AQ86UY5 434 aa12.89□□□□□ -0.35
RBBP4-216ENST00000525506 ZFPM1Q8IX07 1006 aa12.89□□□□□ -0.35
RBBP4-216ENST00000525506 PTPN18Q99952 460 aa12.89□□□□□ -0.35
RBBP4-216ENST00000525506 USP40Q9NVE5 1235 aa12.89□□□□□ -0.35
RBBP4-216ENST00000525506 ABCF2Q9UG63 623 aa12.89□□□□□ -0.35
RBBP4-216ENST00000525506 COG6Q9Y2V7 657 aa12.89□□□□□ -0.35
RBBP4-216ENST00000525506 UNCXA6NJT0 531 aa12.88□□□□□ -0.35
RBBP4-216ENST00000525506 HMMRO75330 724 aa12.88□□□□□ -0.35
RBBP4-216ENST00000525506 HSP90AB4PQ58FF6 505 aa12.88□□□□□ -0.35
RBBP4-216ENST00000525506 FKBP1CQ5VVH2 108 aa12.88□□□□□ -0.35
RBBP4-216ENST00000525506 TBC1D9Q6ZT07 1266 aa12.88□□□□□ -0.35
RBBP4-216ENST00000525506 ERC1Q8IUD2 1116 aa12.88□□□□□ -0.35
RBBP4-216ENST00000525506 ZKSCAN4Q969J2 545 aaPredicted RBP12.88□□□□□ -0.35
RBBP4-216ENST00000525506 MS4A4AQ96JQ5 239 aa12.88□□□□□ -0.35
RBBP4-216ENST00000525506 WRNIP1Q96S55 665 aa12.88□□□□□ -0.35
RBBP4-216ENST00000525506 FAM198AQ9UFP1 575 aa12.88□□□□□ -0.35
RBBP4-216ENST00000525506 INHBEP58166 350 aa12.87□□□□□ -0.35
RBBP4-216ENST00000525506 GORABQ5T7V8 394 aa12.87□□□□□ -0.35
RBBP4-216ENST00000525506 DZIP1Q86YF9 867 aaKnown RBP12.87□□□□□ -0.35
RBBP4-216ENST00000525506 FAM151AQ8WW52 585 aa12.87□□□□□ -0.35
RBBP4-216ENST00000525506 OTUD5Q96G74 571 aa12.87□□□□□ -0.35
RBBP4-216ENST00000525506 HMG20BQ9P0W2 317 aa12.87□□□□□ -0.35
RBBP4-216ENST00000525506 CSADQ9Y600 493 aa12.87□□□□□ -0.35
RBBP4-216ENST00000525506 SNCAIPQ9Y6H5 919 aa12.87□□□□□ -0.35
RBBP4-216ENST00000525506 DOCK2Q92608 1830 aa12.87□□□□□ -0.35
RBBP4-216ENST00000525506 IGSF3O75054 1194 aa12.86□□□□□ -0.35
RBBP4-216ENST00000525506 FKTNO75072 461 aa12.86□□□□□ -0.35
RBBP4-216ENST00000525506 SURF6O75683 361 aaKnown RBP12.86□□□□□ -0.35
RBBP4-216ENST00000525506 SLURP2P0DP57 97 aa12.86□□□□□ -0.35
RBBP4-216ENST00000525506 INPP5BP32019 993 aa12.86□□□□□ -0.35
RBBP4-216ENST00000525506 RRP1P56182 461 aaKnown RBP12.86□□□□□ -0.35
RBBP4-216ENST00000525506 CRHR2Q13324 411 aa12.86□□□□□ -0.35
RBBP4-216ENST00000525506 OS9Q13438 667 aaPredicted RBP12.86□□□□□ -0.35
RBBP4-216ENST00000525506 ERICH6Q7L0X2 663 aa12.86□□□□□ -0.35
RBBP4-216ENST00000525506 ZGPATQ8N5A5 531 aaKnown RBP12.86□□□□□ -0.35
RBBP4-216ENST00000525506 ZNF384Q8TF68 577 aa12.86□□□□□ -0.35
RBBP4-216ENST00000525506 BRI3BPQ8WY22 251 aa12.86□□□□□ -0.35
RBBP4-216ENST00000525506 YTHDC1Q96MU7 727 aaKnown RBP12.86□□□□□ -0.35
RBBP4-216ENST00000525506 CFHR5Q9BXR6 569 aa12.86□□□□□ -0.35
RBBP4-216ENST00000525506 GAKO14976 1311 aa12.86□□□□□ -0.35
RBBP4-216ENST00000525506 RPAP1Q9BWH6 1393 aaPredicted RBP12.85□□□□□ -0.35
RBBP4-216ENST00000525506 TESPA1A2RU30 521 aaPredicted RBP12.85□□□□□ -0.35
RBBP4-216ENST00000525506 ALDH1A1P00352 501 aa12.85□□□□□ -0.35
RBBP4-216ENST00000525506 ARID4AP29374 1257 aaPredicted RBP12.85□□□□□ -0.35
RBBP4-216ENST00000525506 MCAMP43121 646 aa12.85□□□□□ -0.35
RBBP4-216ENST00000525506 RGS3P49796 1198 aa12.85□□□□□ -0.35
RBBP4-216ENST00000525506 MECOMQ03112 1051 aa12.85□□□□□ -0.35
RBBP4-216ENST00000525506 C20orf194Q5TEA3 1177 aa12.85□□□□□ -0.35
RBBP4-216ENST00000525506 SPTY2D1Q68D10 685 aaPredicted RBP12.85□□□□□ -0.35
RBBP4-216ENST00000525506 SPATA5Q8NB90 893 aa12.85□□□□□ -0.35
RBBP4-216ENST00000525506 ZNF512BQ96KM6 892 aaPredicted RBP12.85□□□□□ -0.35
RBBP4-216ENST00000525506 DBNDD2Q9BQY9 259 aa12.85□□□□□ -0.35
RBBP4-216ENST00000525506 ZNF341Q9BYN7 854 aa12.85□□□□□ -0.35
RBBP4-216ENST00000525506 SNRKQ9NRH2 765 aa12.85□□□□□ -0.35
RBBP4-216ENST00000525506 ZSWIM8A7E2V4 1837 aa12.84□□□□□ -0.35
RBBP4-216ENST00000525506 CCL15-CCL14A0A0B4J2E2 113 aa12.84□□□□□ -0.35
RBBP4-216ENST00000525506 SPDYE5A6NIY4 337 aa12.84□□□□□ -0.35
RBBP4-216ENST00000525506 BTDP43251 543 aa12.84□□□□□ -0.35
RBBP4-216ENST00000525506 SOX10P56693 466 aa12.84□□□□□ -0.35
RBBP4-216ENST00000525506 CCL15Q16663 113 aa12.84□□□□□ -0.35
RBBP4-216ENST00000525506 TNNI3KQ59H18 835 aa12.84□□□□□ -0.35
RBBP4-216ENST00000525506 NOM1Q5C9Z4 860 aaKnown RBP12.84□□□□□ -0.35
RBBP4-216ENST00000525506 DCAF15Q66K64 600 aa12.84□□□□□ -0.35
RBBP4-216ENST00000525506 SH3BP5LQ7L8J4 393 aa12.84□□□□□ -0.35
RBBP4-216ENST00000525506 FAM43AQ8N2R8 423 aa12.84□□□□□ -0.35
RBBP4-216ENST00000525506 HOOK2Q96ED9 719 aa12.84□□□□□ -0.35
RBBP4-216ENST00000525506 DDX4Q9NQI0 724 aaKnown RBP12.84□□□□□ -0.35
RBBP4-216ENST00000525506 HPS5Q9UPZ3 1129 aa12.84□□□□□ -0.35
RBBP4-216ENST00000525506 FPGT-TNNI3KV9GXZ4 949 aa12.84□□□□□ -0.35
RBBP4-216ENST00000525506 CDK5RAP2Q96SN8 1893 aa12.84□□□□□ -0.35
RBBP4-216ENST00000525506 MROH7-TTC4A0A0A0MT08 1334 aa12.84□□□□□ -0.35
RBBP4-216ENST00000525506 IRF6O14896 467 aa12.83□□□□□ -0.36
RBBP4-216ENST00000525506 WDHD1O75717 1129 aaPredicted RBP12.83□□□□□ -0.36
RBBP4-216ENST00000525506 UQCRFS1P1P0C7P4 283 aa12.83□□□□□ -0.36
RBBP4-216ENST00000525506 GTF2A2P52657 109 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms