RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 PPIL2Q13356 520 aa29.97■■■□□ 2.39
USP47-205ENST00000525257 MIGA2Q7L4E1 593 aa29.97■■■□□ 2.39
USP47-205ENST00000525257 WDR66Q8TBY9 1149 aa29.97■■■□□ 2.39
USP47-205ENST00000525257 LPIN2Q92539 896 aa29.97■■■□□ 2.39
USP47-205ENST00000525257 TLR2O60603 784 aa29.96■■■□□ 2.39
USP47-205ENST00000525257 ZNF341Q9BYN7 854 aa29.96■■■□□ 2.39
USP47-205ENST00000525257 ARHGAP39Q9C0H5 1083 aa29.96■■■□□ 2.39
USP47-205ENST00000525257 NBPF11Q86T75 865 aa29.95■■■□□ 2.39
USP47-205ENST00000525257 ZCCHC17Q9NP64 241 aaKnown RBP29.95■■■□□ 2.39
USP47-205ENST00000525257 INPP5BP32019 993 aa29.94■■■□□ 2.38
USP47-205ENST00000525257 DIXDC1Q155Q3 683 aa29.94■■■□□ 2.38
USP47-205ENST00000525257 ATG9AQ7Z3C6 839 aa29.94■■■□□ 2.38
USP47-205ENST00000525257 MYCP01106 439 aaPredicted RBP29.93■■■□□ 2.38
USP47-205ENST00000525257 LACTBP83111 547 aaPredicted RBP29.93■■■□□ 2.38
USP47-205ENST00000525257 KIF22Q14807 665 aa29.93■■■□□ 2.38
USP47-205ENST00000525257 FAM151AQ8WW52 585 aa29.93■■■□□ 2.38
USP47-205ENST00000525257 SIL1Q9H173 461 aa29.93■■■□□ 2.38
USP47-205ENST00000525257 DAGLAQ9Y4D2 1042 aa29.93■■■□□ 2.38
USP47-205ENST00000525257 AK9Q5TCS8 1911 aa29.92■■■□□ 2.38
USP47-205ENST00000525257 ECM2O94769 699 aaPredicted RBP29.92■■■□□ 2.38
USP47-205ENST00000525257 SLFN5Q08AF3 891 aa29.92■■■□□ 2.38
USP47-205ENST00000525257 TCP10Q12799 353 aa29.92■■■□□ 2.38
USP47-205ENST00000525257 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.92■■■□□ 2.38
USP47-205ENST00000525257 PRDX5P30044 214 aa29.91■■■□□ 2.38
USP47-205ENST00000525257 PPATQ06203 517 aa29.91■■■□□ 2.38
USP47-205ENST00000525257 SLC4A8Q2Y0W8 1093 aa29.91■■■□□ 2.38
USP47-205ENST00000525257 CDC42EP5Q6NZY7 148 aa29.91■■■□□ 2.38
USP47-205ENST00000525257 SH3TC2Q8TF17 1288 aa29.91■■■□□ 2.38
USP47-205ENST00000525257 SMC4Q9NTJ3 1288 aa29.91■■■□□ 2.38
USP47-205ENST00000525257 NFIAQ12857 509 aa29.9■■■□□ 2.38
USP47-205ENST00000525257 ATP2B3Q16720 1220 aa29.9■■■□□ 2.38
USP47-205ENST00000525257 ALDH1L2Q3SY69 923 aa29.9■■■□□ 2.38
USP47-205ENST00000525257 HABP4Q5JVS0 413 aaKnown RBP29.9■■■□□ 2.38
USP47-205ENST00000525257 LDHBP07195 334 aaKnown RBP29.88■■■□□ 2.37
USP47-205ENST00000525257 UBTFL1P0CB47 393 aaPredicted RBP29.88■■■□□ 2.37
USP47-205ENST00000525257 CPA4Q9UI42 421 aa29.88■■■□□ 2.37
USP47-205ENST00000525257 CDCA7LQ96GN5 454 aa29.87■■■□□ 2.37
USP47-205ENST00000525257 GNL3LQ9NVN8 582 aaKnown RBP29.87■■■□□ 2.37
USP47-205ENST00000525257 CEP126Q9P2H0 1117 aa29.87■■■□□ 2.37
USP47-205ENST00000525257 ZNF112Q9UJU3 913 aa29.87■■■□□ 2.37
USP47-205ENST00000525257 CIAO1O76071 339 aa29.86■■■□□ 2.37
USP47-205ENST00000525257 C17orf99Q6UX52 265 aa29.86■■■□□ 2.37
USP47-205ENST00000525257 ANKRD23Q86SG2 305 aa29.86■■■□□ 2.37
USP47-205ENST00000525257 USP40Q9NVE5 1235 aa29.86■■■□□ 2.37
USP47-205ENST00000525257 FAM198AQ9UFP1 575 aa29.86■■■□□ 2.37
USP47-205ENST00000525257 PDHXO00330 501 aa29.85■■■□□ 2.37
USP47-205ENST00000525257 GNRH1P01148 92 aa29.85■■■□□ 2.37
USP47-205ENST00000525257 FBXO3Q9UK99 471 aa29.85■■■□□ 2.37
USP47-205ENST00000525257 KCNH4Q9UQ05 1017 aa29.85■■■□□ 2.37
USP47-205ENST00000525257 PHKA1P46020 1223 aa29.84■■■□□ 2.37
USP47-205ENST00000525257 SALL1Q9NSC2 1324 aa29.83■■■□□ 2.37
USP47-205ENST00000525257 CTGFP29279 349 aa29.83■■■□□ 2.37
USP47-205ENST00000525257 ZFPM1Q8IX07 1006 aa29.83■■■□□ 2.37
USP47-205ENST00000525257 DENND2AQ9ULE3 1009 aa29.83■■■□□ 2.37
USP47-205ENST00000525257 PA2G4Q9UQ80 394 aaKnown RBP29.83■■■□□ 2.37
USP47-205ENST00000525257 DOCK2Q92608 1830 aa29.82■■■□□ 2.36
USP47-205ENST00000525257 ADGRA2Q96PE1 1338 aa29.82■■■□□ 2.36
USP47-205ENST00000525257 PSMC4P43686 418 aa29.82■■■□□ 2.36
USP47-205ENST00000525257 PRMT2P55345 433 aa29.82■■■□□ 2.36
USP47-205ENST00000525257 NOL9Q5SY16 702 aaKnown RBP29.82■■■□□ 2.36
USP47-205ENST00000525257 TRIM47Q96LD4 638 aa29.82■■■□□ 2.36
USP47-205ENST00000525257 LRRFIP2Q9Y608 721 aaKnown RBP29.82■■■□□ 2.36
USP47-205ENST00000525257 MYH2Q9UKX2 1941 aa29.81■■■□□ 2.36
USP47-205ENST00000525257 MOGSQ13724 837 aa29.81■■■□□ 2.36
USP47-205ENST00000525257 NOB1Q9ULX3 412 aaKnown RBP29.81■■■□□ 2.36
USP47-205ENST00000525257 SEMA3EO15041 775 aa29.8■■■□□ 2.36
USP47-205ENST00000525257 ADORA1P30542 326 aa29.8■■■□□ 2.36
USP47-205ENST00000525257 IL15P40933 162 aaPredicted RBP29.8■■■□□ 2.36
USP47-205ENST00000525257 SRRDQ9UH36 339 aa29.8■■■□□ 2.36
USP47-205ENST00000525257 CEP290O15078 2479 aa29.79■■■□□ 2.36
USP47-205ENST00000525257 FMNL1O95466 1100 aaPredicted RBP29.78■■■□□ 2.36
USP47-205ENST00000525257 OSBPP22059 807 aa29.78■■■□□ 2.36
USP47-205ENST00000525257 RGS3P49796 1198 aa29.78■■■□□ 2.36
USP47-205ENST00000525257 MTFR1Q15390 333 aa29.78■■■□□ 2.36
USP47-205ENST00000525257 ATRNL1Q5VV63 1379 aa29.77■■■□□ 2.36
USP47-205ENST00000525257 CCDC102BQ68D86 513 aa29.77■■■□□ 2.36
USP47-205ENST00000525257 RAET1EQ8TD07 263 aa29.77■■■□□ 2.36
USP47-205ENST00000525257 PARK7Q99497 189 aaKnown RBP29.77■■■□□ 2.36
USP47-205ENST00000525257 GPAT2Q6NUI2 795 aa29.76■■■□□ 2.35
USP47-205ENST00000525257 ZGPATQ8N5A5 531 aaKnown RBP29.76■■■□□ 2.35
USP47-205ENST00000525257 API5Q9BZZ5 524 aaKnown RBP29.76■■■□□ 2.35
USP47-205ENST00000525257 GAKO14976 1311 aa29.75■■■□□ 2.35
USP47-205ENST00000525257 MYPNQ86TC9 1320 aa29.75■■■□□ 2.35
USP47-205ENST00000525257 CXCL11O14625 94 aa29.75■■■□□ 2.35
USP47-205ENST00000525257 CYP2C8P10632 490 aa29.75■■■□□ 2.35
USP47-205ENST00000525257 HOXD10P28358 340 aa29.75■■■□□ 2.35
USP47-205ENST00000525257 RASGRF1Q13972 1273 aa29.75■■■□□ 2.35
USP47-205ENST00000525257 DZIP1Q86YF9 867 aaKnown RBP29.75■■■□□ 2.35
USP47-205ENST00000525257 ZSCAN29Q8IWY8 852 aaPredicted RBP29.75■■■□□ 2.35
USP47-205ENST00000525257 TRMT2AQ8IZ69 625 aaKnown RBP29.75■■■□□ 2.35
USP47-205ENST00000525257 MEIS3Q99687 375 aa29.75■■■□□ 2.35
USP47-205ENST00000525257 IDI2Q9BXS1 227 aa29.75■■■□□ 2.35
USP47-205ENST00000525257 COPRSQ9NQ92 184 aa29.75■■■□□ 2.35
USP47-205ENST00000525257 RFX7Q2KHR2 1363 aa29.75■■■□□ 2.35
USP47-205ENST00000525257 PHF20L1A8MW92 1017 aa29.74■■■□□ 2.35
USP47-205ENST00000525257 ENTPD3O75355 529 aa29.74■■■□□ 2.35
USP47-205ENST00000525257 SCYL3Q8IZE3 742 aa29.74■■■□□ 2.35
USP47-205ENST00000525257 SHISA4Q96DD7 197 aa29.74■■■□□ 2.35
USP47-205ENST00000525257 PICK1Q9NRD5 415 aa29.74■■■□□ 2.35
USP47-205ENST00000525257 ABCF2Q9UG63 623 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms