RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 NBPF12Q5TAG4 269 aaPredicted RBP12.87□□□□□ -0.35
DENND3-220ENST00000523066 HHIPL2Q6UWX4 724 aa12.87□□□□□ -0.35
DENND3-220ENST00000523066 ERICH6Q7L0X2 663 aa12.87□□□□□ -0.35
DENND3-220ENST00000523066 DZIP1Q86YF9 867 aaKnown RBP12.87□□□□□ -0.35
DENND3-220ENST00000523066 MRIQ9BWK5 157 aa12.87□□□□□ -0.35
DENND3-220ENST00000523066 ANTXR1Q9H6X2 564 aa12.87□□□□□ -0.35
DENND3-220ENST00000523066 DCTPP1Q9H773 170 aa12.87□□□□□ -0.35
DENND3-220ENST00000523066 PIH1D3Q9NQM4 214 aaKnown RBP12.87□□□□□ -0.35
DENND3-220ENST00000523066 DOCK2Q92608 1830 aa12.87□□□□□ -0.35
DENND3-220ENST00000523066 MAST2Q6P0Q8 1798 aa12.86□□□□□ -0.35
DENND3-220ENST00000523066 UBE2Q2LH0YL09 131 aa12.86□□□□□ -0.35
DENND3-220ENST00000523066 IFIT2P09913 472 aaKnown RBP12.86□□□□□ -0.35
DENND3-220ENST00000523066 HUNKP57058 714 aa12.86□□□□□ -0.35
DENND3-220ENST00000523066 CDC42EP5Q6NZY7 148 aa12.86□□□□□ -0.35
DENND3-220ENST00000523066 ZGPATQ8N5A5 531 aaKnown RBP12.86□□□□□ -0.35
DENND3-220ENST00000523066 C2orf69Q8N8R5 385 aa12.86□□□□□ -0.35
DENND3-220ENST00000523066 ZNF512BQ96KM6 892 aaPredicted RBP12.86□□□□□ -0.35
DENND3-220ENST00000523066 LRRCC1Q9C099 1032 aa12.86□□□□□ -0.35
DENND3-220ENST00000523066 TMEM39BQ9GZU3 492 aa12.86□□□□□ -0.35
DENND3-220ENST00000523066 RAI14Q9P0K7 980 aa12.86□□□□□ -0.35
DENND3-220ENST00000523066 CDK5RAP2Q96SN8 1893 aa12.86□□□□□ -0.35
DENND3-220ENST00000523066 NFIAQ12857 509 aa12.85□□□□□ -0.35
DENND3-220ENST00000523066 JMYQ8N9B5 988 aa12.85□□□□□ -0.35
DENND3-220ENST00000523066 NSUN4Q96CB9 384 aaKnown RBP12.85□□□□□ -0.35
DENND3-220ENST00000523066 EDC3Q96F86 508 aaKnown RBP12.85□□□□□ -0.35
DENND3-220ENST00000523066 CAPNS2Q96L46 248 aa12.85□□□□□ -0.35
DENND3-220ENST00000523066 TEPSINQ96N21 525 aa12.85□□□□□ -0.35
DENND3-220ENST00000523066 ZIC5Q96T25 663 aa12.85□□□□□ -0.35
DENND3-220ENST00000523066 USP40Q9NVE5 1235 aa12.85□□□□□ -0.35
DENND3-220ENST00000523066 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.85□□□□□ -0.35
DENND3-220ENST00000523066 LRP2BPQ9P2M1 347 aa12.85□□□□□ -0.35
DENND3-220ENST00000523066 CEP350Q5VT06 3117 aa12.85□□□□□ -0.35
DENND3-220ENST00000523066 OTOFQ9HC10 1997 aa12.85□□□□□ -0.35
DENND3-220ENST00000523066 GAKO14976 1311 aa12.85□□□□□ -0.35
DENND3-220ENST00000523066 WDR33Q9C0J8 1336 aaKnown RBP12.85□□□□□ -0.35
DENND3-220ENST00000523066 AOC2O75106 756 aa12.84□□□□□ -0.35
DENND3-220ENST00000523066 BTDP43251 543 aa12.84□□□□□ -0.35
DENND3-220ENST00000523066 TCP10Q12799 353 aa12.84□□□□□ -0.35
DENND3-220ENST00000523066 TTLL12Q14166 644 aaPredicted RBP12.84□□□□□ -0.35
DENND3-220ENST00000523066 TSHZ3Q63HK5 1081 aa12.84□□□□□ -0.35
DENND3-220ENST00000523066 SPTY2D1Q68D10 685 aaPredicted RBP12.84□□□□□ -0.35
DENND3-220ENST00000523066 ADGRA1Q86SQ6 560 aa12.84□□□□□ -0.35
DENND3-220ENST00000523066 MROH7-TTC4A0A0A0MT08 1334 aa12.84□□□□□ -0.35
DENND3-220ENST00000523066 RGMBQ6NW40 437 aa12.83□□□□□ -0.36
DENND3-220ENST00000523066 ZFPM1Q8IX07 1006 aa12.83□□□□□ -0.36
DENND3-220ENST00000523066 SPDYE1Q8NFV5 336 aaPredicted RBP12.83□□□□□ -0.36
DENND3-220ENST00000523066 OTUD7AQ8TE49 926 aaPredicted RBP12.83□□□□□ -0.36
DENND3-220ENST00000523066 BOLA2Q9H3K6 86 aa12.83□□□□□ -0.36
DENND3-220ENST00000523066 FAM198AQ9UFP1 575 aa12.83□□□□□ -0.36
DENND3-220ENST00000523066 ANGEL1Q9UNK9 670 aaKnown RBP12.83□□□□□ -0.36
DENND3-220ENST00000523066 THSD7BQ9C0I4 1608 aa12.83□□□□□ -0.36
DENND3-220ENST00000523066 FAM155AB1AL88 458 aaPredicted RBP12.82□□□□□ -0.36
DENND3-220ENST00000523066 IDH1O75874 414 aaKnown RBP12.82□□□□□ -0.36
DENND3-220ENST00000523066 IGHDP01880 384 aa12.82□□□□□ -0.36
DENND3-220ENST00000523066 SLURP2P0DP57 97 aa12.82□□□□□ -0.36
DENND3-220ENST00000523066 NF2P35240 595 aa12.82□□□□□ -0.36
DENND3-220ENST00000523066 TNFAIP1Q13829 316 aa12.82□□□□□ -0.36
DENND3-220ENST00000523066 FAM163AQ96GL9 167 aaPredicted RBP12.82□□□□□ -0.36
DENND3-220ENST00000523066 DNAJC2Q99543 621 aaKnown RBP12.82□□□□□ -0.36
DENND3-220ENST00000523066 DDX4Q9NQI0 724 aaKnown RBP12.82□□□□□ -0.36
DENND3-220ENST00000523066 TMOD2Q9NZR1 351 aa12.82□□□□□ -0.36
DENND3-220ENST00000523066 PPP2R3BQ9Y5P8 575 aa12.82□□□□□ -0.36
DENND3-220ENST00000523066 MYH7P12883 1935 aa12.82□□□□□ -0.36
DENND3-220ENST00000523066 GPR75-ASB3A0A0A6YYF3 556 aa12.81□□□□□ -0.36
DENND3-220ENST00000523066 GOLIM4O00461 696 aa12.81□□□□□ -0.36
DENND3-220ENST00000523066 USP2O75604 605 aaPredicted RBP12.81□□□□□ -0.36
DENND3-220ENST00000523066 TNNI2P48788 182 aa12.81□□□□□ -0.36
DENND3-220ENST00000523066 ZNF157P51786 506 aaPredicted RBP12.81□□□□□ -0.36
DENND3-220ENST00000523066 RHBDL3P58872 404 aa12.81□□□□□ -0.36
DENND3-220ENST00000523066 SLFNL1Q499Z3 407 aa12.81□□□□□ -0.36
DENND3-220ENST00000523066 NAA16Q6N069 864 aaPredicted RBP12.81□□□□□ -0.36
DENND3-220ENST00000523066 HHIPL1Q96JK4 782 aa12.81□□□□□ -0.36
DENND3-220ENST00000523066 ZBTB47Q9UFB7 747 aaPredicted RBP12.81□□□□□ -0.36
DENND3-220ENST00000523066 FOCADQ5VW36 1801 aa12.81□□□□□ -0.36
DENND3-220ENST00000523066 RFX7Q2KHR2 1363 aa12.81□□□□□ -0.36
DENND3-220ENST00000523066 WDHD1O75717 1129 aaPredicted RBP12.8□□□□□ -0.36
DENND3-220ENST00000523066 CHGBP05060 677 aa12.8□□□□□ -0.36
DENND3-220ENST00000523066 HSPA1AP0DMV8 641 aaKnown RBP12.8□□□□□ -0.36
DENND3-220ENST00000523066 HSPA1BP0DMV9 641 aaKnown RBP12.8□□□□□ -0.36
DENND3-220ENST00000523066 ATP5JP18859 108 aa12.8□□□□□ -0.36
DENND3-220ENST00000523066 ECE1P42892 770 aa12.8□□□□□ -0.36
DENND3-220ENST00000523066 RGS3P49796 1198 aa12.8□□□□□ -0.36
DENND3-220ENST00000523066 DYNLL1P63167 89 aaKnown RBP12.8□□□□□ -0.36
DENND3-220ENST00000523066 FKBP1BP68106 108 aa12.8□□□□□ -0.36
DENND3-220ENST00000523066 MKRN3Q13064 507 aaKnown RBP12.8□□□□□ -0.36
DENND3-220ENST00000523066 PICALMQ13492 652 aa12.8□□□□□ -0.36
DENND3-220ENST00000523066 HDAC1Q13547 482 aaPredicted RBP12.8□□□□□ -0.36
DENND3-220ENST00000523066 SUPT20HL1Q3ZLR7 823 aa12.8□□□□□ -0.36
DENND3-220ENST00000523066 ARMC9Q7Z3E5 817 aa12.8□□□□□ -0.36
DENND3-220ENST00000523066 FAM83AQ86UY5 434 aa12.8□□□□□ -0.36
DENND3-220ENST00000523066 RASAL3Q86YV0 1011 aa12.8□□□□□ -0.36
DENND3-220ENST00000523066 SLF2Q8IX21 1173 aa12.8□□□□□ -0.36
DENND3-220ENST00000523066 MAGEB6Q8N7X4 407 aa12.8□□□□□ -0.36
DENND3-220ENST00000523066 SH3RF3Q8TEJ3 882 aaPredicted RBP12.8□□□□□ -0.36
DENND3-220ENST00000523066 FAM151AQ8WW52 585 aa12.8□□□□□ -0.36
DENND3-220ENST00000523066 CLMNQ96JQ2 1002 aa12.8□□□□□ -0.36
DENND3-220ENST00000523066 AATFQ9NY61 560 aaKnown RBP eCLIP12.8□□□□□ -0.36
DENND3-220ENST00000523066 LDHCP07864 332 aa12.79□□□□□ -0.36
DENND3-220ENST00000523066 SLC10A3P09131 477 aa12.79□□□□□ -0.36
DENND3-220ENST00000523066 CYP7A1P22680 504 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms