RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 TBC1D2Q9BYX2 928 aa10.42□□□□□ -0.74
PVT1-213ENST00000522414 CNTNAP3Q9BZ76 1288 aa10.42□□□□□ -0.74
PVT1-213ENST00000522414 TMX4Q9H1E5 349 aaPredicted RBP10.42□□□□□ -0.74
PVT1-213ENST00000522414 MBIPQ9NS73 344 aa10.42□□□□□ -0.74
PVT1-213ENST00000522414 PPIP5K2O43314 1243 aa10.41□□□□□ -0.74
PVT1-213ENST00000522414 GDF11O95390 407 aa10.41□□□□□ -0.74
PVT1-213ENST00000522414 GJA5P36382 358 aa10.41□□□□□ -0.74
PVT1-213ENST00000522414 SCNN1DP51172 638 aa10.41□□□□□ -0.74
PVT1-213ENST00000522414 AMHR2Q16671 573 aa10.41□□□□□ -0.74
PVT1-213ENST00000522414 PNMA8AQ86V59 439 aaPredicted RBP10.41□□□□□ -0.74
PVT1-213ENST00000522414 SP8Q8IXZ3 490 aa10.41□□□□□ -0.74
PVT1-213ENST00000522414 PLBD2Q8NHP8 589 aa10.41□□□□□ -0.74
PVT1-213ENST00000522414 SH3TC1Q8TE82 1336 aa10.4□□□□□ -0.74
PVT1-213ENST00000522414 TMEM88BA6NKF7 163 aa10.4□□□□□ -0.74
PVT1-213ENST00000522414 ZNF853P0CG23 659 aa10.4□□□□□ -0.74
PVT1-213ENST00000522414 CXCL9Q07325 125 aa10.4□□□□□ -0.74
PVT1-213ENST00000522414 AGERQ15109 404 aa10.4□□□□□ -0.74
PVT1-213ENST00000522414 CCDC184Q52MB2 194 aa10.4□□□□□ -0.74
PVT1-213ENST00000522414 DPP8Q6V1X1 898 aaPredicted RBP10.4□□□□□ -0.74
PVT1-213ENST00000522414 DDX46Q7L014 1031 aaKnown RBP10.4□□□□□ -0.74
PVT1-213ENST00000522414 NIM1KQ8IY84 436 aa10.4□□□□□ -0.74
PVT1-213ENST00000522414 JARID2Q92833 1246 aaPredicted RBP10.4□□□□□ -0.74
PVT1-213ENST00000522414 ISCA1Q9BUE6 129 aa10.4□□□□□ -0.74
PVT1-213ENST00000522414 PHAXQ9H814 394 aaKnown RBP10.4□□□□□ -0.74
PVT1-213ENST00000522414 DBF4Q9UBU7 674 aaPredicted RBP10.4□□□□□ -0.74
PVT1-213ENST00000522414 SCN4AP35499 1836 aa10.4□□□□□ -0.75
PVT1-213ENST00000522414 ADAMTSL1Q8N6G6 1762 aa10.39□□□□□ -0.75
PVT1-213ENST00000522414 UPP2O95045 317 aa10.39□□□□□ -0.75
PVT1-213ENST00000522414 LMOD1P29536 600 aaPredicted RBP10.39□□□□□ -0.75
PVT1-213ENST00000522414 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.39□□□□□ -0.75
PVT1-213ENST00000522414 C8orf58Q8NAV2 365 aa10.39□□□□□ -0.75
PVT1-213ENST00000522414 RTFDC1Q9BY42 306 aaPredicted RBP10.39□□□□□ -0.75
PVT1-213ENST00000522414 HYPKQ9NX55 129 aa10.39□□□□□ -0.75
PVT1-213ENST00000522414 ZNRF3Q9ULT6 936 aa10.39□□□□□ -0.75
PVT1-213ENST00000522414 TRAF5O00463 557 aa10.38□□□□□ -0.75
PVT1-213ENST00000522414 SPTLC1O15269 473 aa10.38□□□□□ -0.75
PVT1-213ENST00000522414 RAD17O75943 681 aa10.38□□□□□ -0.75
PVT1-213ENST00000522414 GRAPQ13588 217 aa10.38□□□□□ -0.75
PVT1-213ENST00000522414 RIC3Q7Z5B4 369 aa10.38□□□□□ -0.75
PVT1-213ENST00000522414 BPHLQ86WA6 291 aaPredicted RBP10.38□□□□□ -0.75
PVT1-213ENST00000522414 TNS4Q8IZW8 715 aa10.38□□□□□ -0.75
PVT1-213ENST00000522414 GRAPLQ8TC17 118 aaPredicted RBP10.38□□□□□ -0.75
PVT1-213ENST00000522414 CELF1Q92879 486 aaKnown RBP10.38□□□□□ -0.75
PVT1-213ENST00000522414 C1QTNF2Q9BXJ5 285 aa10.38□□□□□ -0.75
PVT1-213ENST00000522414 NSFL1CQ9UNZ2 370 aaKnown RBP10.38□□□□□ -0.75
PVT1-213ENST00000522414 LAMB2P55268 1798 aa10.38□□□□□ -0.75
PVT1-213ENST00000522414 SHTN1A0MZ66 631 aa10.37□□□□□ -0.75
PVT1-213ENST00000522414 HOXB7P09629 217 aa10.37□□□□□ -0.75
PVT1-213ENST00000522414 TAF1P21675 1872 aa10.37□□□□□ -0.75
PVT1-213ENST00000522414 FSHRP23945 695 aa10.37□□□□□ -0.75
PVT1-213ENST00000522414 GMPSP49915 693 aaPredicted RBP10.37□□□□□ -0.75
PVT1-213ENST00000522414 PTSQ03393 145 aa10.37□□□□□ -0.75
PVT1-213ENST00000522414 TRIM28Q13263 835 aaKnown RBP10.37□□□□□ -0.75
PVT1-213ENST00000522414 SF3B3Q15393 1217 aaKnown RBP10.37□□□□□ -0.75
PVT1-213ENST00000522414 DEFB115Q30KQ5 88 aa10.37□□□□□ -0.75
PVT1-213ENST00000522414 CST9Q5W186 159 aa10.37□□□□□ -0.75
PVT1-213ENST00000522414 SH3RF1Q7Z6J0 888 aa10.37□□□□□ -0.75
PVT1-213ENST00000522414 SUPT20HQ8NEM7 779 aa10.37□□□□□ -0.75
PVT1-213ENST00000522414 COL25A1Q9BXS0 654 aaPredicted RBP10.37□□□□□ -0.75
PVT1-213ENST00000522414 VPS33BQ9H267 617 aa10.37□□□□□ -0.75
PVT1-213ENST00000522414 KCNQ5Q9NR82 932 aa10.37□□□□□ -0.75
PVT1-213ENST00000522414 GPRC5DQ9NZD1 345 aa10.37□□□□□ -0.75
PVT1-213ENST00000522414 CNTNAP1P78357 1384 aa10.37□□□□□ -0.75
PVT1-213ENST00000522414 LRRC37AA6NMS7 1700 aa10.36□□□□□ -0.75
PVT1-213ENST00000522414 YDJCA8MPS7 323 aa10.36□□□□□ -0.75
PVT1-213ENST00000522414 IRS4O14654 1257 aaPredicted RBP10.36□□□□□ -0.75
PVT1-213ENST00000522414 FOXN1O15353 648 aa10.36□□□□□ -0.75
PVT1-213ENST00000522414 HIRAP54198 1017 aaPredicted RBP10.36□□□□□ -0.75
PVT1-213ENST00000522414 GNAI1P63096 354 aa10.36□□□□□ -0.75
PVT1-213ENST00000522414 GPSM2P81274 684 aa10.36□□□□□ -0.75
PVT1-213ENST00000522414 KIAA2012Q0VF49 1180 aa10.36□□□□□ -0.75
PVT1-213ENST00000522414 RNFT1Q5M7Z0 435 aa10.36□□□□□ -0.75
PVT1-213ENST00000522414 ZNF385CQ66K41 422 aaPredicted RBP10.36□□□□□ -0.75
PVT1-213ENST00000522414 USP50Q70EL3 339 aaPredicted RBP10.36□□□□□ -0.75
PVT1-213ENST00000522414 TSPYL6Q8N831 410 aa10.36□□□□□ -0.75
PVT1-213ENST00000522414 GPR101Q96P66 508 aaPredicted RBP10.36□□□□□ -0.75
PVT1-213ENST00000522414 MYD88Q99836 296 aa10.36□□□□□ -0.75
PVT1-213ENST00000522414 SEC31BQ9NQW1 1179 aa10.36□□□□□ -0.75
PVT1-213ENST00000522414 IFT57Q9NWB7 429 aa10.36□□□□□ -0.75
PVT1-213ENST00000522414 POLLQ9UGP5 575 aa10.36□□□□□ -0.75
PVT1-213ENST00000522414 ABT1Q9ULW3 272 aaKnown RBP10.36□□□□□ -0.75
PVT1-213ENST00000522414 RPS8P62241 208 aaKnown RBP10.35□□□□□ -0.75
PVT1-213ENST00000522414 CIAPIN1Q6FI81 312 aa10.35□□□□□ -0.75
PVT1-213ENST00000522414 DLK2Q6UY11 383 aa10.35□□□□□ -0.75
PVT1-213ENST00000522414 WHAMMQ8TF30 809 aa10.35□□□□□ -0.75
PVT1-213ENST00000522414 CCDC85AQ96PX6 553 aaPredicted RBP10.35□□□□□ -0.75
PVT1-213ENST00000522414 TSEN34Q9BSV6 310 aaKnown RBP10.35□□□□□ -0.75
PVT1-213ENST00000522414 BCL2L13Q9BXK5 485 aa10.35□□□□□ -0.75
PVT1-213ENST00000522414 ADARB2Q9NS39 739 aaKnown RBP10.35□□□□□ -0.75
PVT1-213ENST00000522414 CNOT7Q9UIV1 285 aaKnown RBP10.35□□□□□ -0.75
PVT1-213ENST00000522414 LTBP1Q14766 1721 aa10.35□□□□□ -0.75
PVT1-213ENST00000522414 DDX60Q8IY21 1712 aaKnown RBP10.35□□□□□ -0.75
PVT1-213ENST00000522414 RASSF10A6NK89 507 aa10.34□□□□□ -0.75
PVT1-213ENST00000522414 TTLL8A6PVC2 850 aa10.34□□□□□ -0.75
PVT1-213ENST00000522414 GRM1Q13255 1194 aa10.34□□□□□ -0.75
PVT1-213ENST00000522414 TNIP1Q15025 636 aa10.34□□□□□ -0.75
PVT1-213ENST00000522414 WASHC4Q2M389 1173 aa10.34□□□□□ -0.75
PVT1-213ENST00000522414 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.34□□□□□ -0.75
PVT1-213ENST00000522414 ZBTB38Q8NAP3 1195 aaPredicted RBP10.34□□□□□ -0.75
PVT1-213ENST00000522414 TSR2Q969E8 191 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms