RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 AK9Q5TCS8 1911 aa25.61■■□□□ 1.69
SDCBP-209ENST00000522243 TCP10Q12799 353 aa25.61■■□□□ 1.69
SDCBP-209ENST00000522243 FTSJ3Q8IY81 847 aaKnown RBP25.61■■□□□ 1.69
SDCBP-209ENST00000522243 CFHR5Q9BXR6 569 aa25.61■■□□□ 1.69
SDCBP-209ENST00000522243 C1orf115Q9H7X2 142 aa25.61■■□□□ 1.69
SDCBP-209ENST00000522243 ABCF2Q9UG63 623 aa25.61■■□□□ 1.69
SDCBP-209ENST00000522243 CSADQ9Y600 493 aa25.61■■□□□ 1.69
SDCBP-209ENST00000522243 ZBED9Q6R2W3 1325 aa25.61■■□□□ 1.69
SDCBP-209ENST00000522243 MVPQ14764 893 aaKnown RBP25.6■■□□□ 1.69
SDCBP-209ENST00000522243 MIGA2Q7L4E1 593 aa25.6■■□□□ 1.69
SDCBP-209ENST00000522243 USP40Q9NVE5 1235 aa25.6■■□□□ 1.69
SDCBP-209ENST00000522243 FKTNO75072 461 aa25.59■■□□□ 1.69
SDCBP-209ENST00000522243 RLBP1P12271 317 aa25.59■■□□□ 1.69
SDCBP-209ENST00000522243 NFIAQ12857 509 aa25.59■■□□□ 1.69
SDCBP-209ENST00000522243 ITPRIPQ8IWB1 547 aa25.59■■□□□ 1.69
SDCBP-209ENST00000522243 ZGPATQ8N5A5 531 aaKnown RBP25.59■■□□□ 1.69
SDCBP-209ENST00000522243 PTPN18Q99952 460 aa25.59■■□□□ 1.69
SDCBP-209ENST00000522243 NOM1Q5C9Z4 860 aaKnown RBP25.58■■□□□ 1.69
SDCBP-209ENST00000522243 FAM151AQ8WW52 585 aa25.58■■□□□ 1.69
SDCBP-209ENST00000522243 OTUD5Q96G74 571 aa25.58■■□□□ 1.69
SDCBP-209ENST00000522243 WRNIP1Q96S55 665 aa25.58■■□□□ 1.69
SDCBP-209ENST00000522243 RPAP1Q9BWH6 1393 aaPredicted RBP25.57■■□□□ 1.68
SDCBP-209ENST00000522243 GORABQ5T7V8 394 aa25.57■■□□□ 1.68
SDCBP-209ENST00000522243 DZIP1Q86YF9 867 aaKnown RBP25.57■■□□□ 1.68
SDCBP-209ENST00000522243 ZKSCAN4Q969J2 545 aaPredicted RBP25.57■■□□□ 1.68
SDCBP-209ENST00000522243 HOOK2Q96ED9 719 aa25.57■■□□□ 1.68
SDCBP-209ENST00000522243 MS4A4AQ96JQ5 239 aa25.57■■□□□ 1.68
SDCBP-209ENST00000522243 TESPA1A2RU30 521 aaPredicted RBP25.56■■□□□ 1.68
SDCBP-209ENST00000522243 ZBTB22O15209 634 aa25.56■■□□□ 1.68
SDCBP-209ENST00000522243 ATP8B2P98198 1209 aa25.56■■□□□ 1.68
SDCBP-209ENST00000522243 POLA2Q14181 598 aa25.56■■□□□ 1.68
SDCBP-209ENST00000522243 DCAF15Q66K64 600 aa25.56■■□□□ 1.68
SDCBP-209ENST00000522243 OTUD7BQ6GQQ9 843 aa25.56■■□□□ 1.68
SDCBP-209ENST00000522243 FAM198AQ9UFP1 575 aa25.56■■□□□ 1.68
SDCBP-209ENST00000522243 SNCAIPQ9Y6H5 919 aa25.56■■□□□ 1.68
SDCBP-209ENST00000522243 CRHR2Q13324 411 aa25.55■■□□□ 1.68
SDCBP-209ENST00000522243 PI16Q6UXB8 463 aa25.55■■□□□ 1.68
SDCBP-209ENST00000522243 ZFPM1Q8IX07 1006 aa25.55■■□□□ 1.68
SDCBP-209ENST00000522243 ZNF341Q9BYN7 854 aa25.55■■□□□ 1.68
SDCBP-209ENST00000522243 HMG20BQ9P0W2 317 aa25.55■■□□□ 1.68
SDCBP-209ENST00000522243 PDS5AQ29RF7 1337 aaKnown RBP25.55■■□□□ 1.68
SDCBP-209ENST00000522243 CCL15-CCL14A0A0B4J2E2 113 aa25.54■■□□□ 1.68
SDCBP-209ENST00000522243 CCL15Q16663 113 aa25.54■■□□□ 1.68
SDCBP-209ENST00000522243 SPTY2D1Q68D10 685 aaPredicted RBP25.54■■□□□ 1.68
SDCBP-209ENST00000522243 ERICH6Q7L0X2 663 aa25.54■■□□□ 1.68
SDCBP-209ENST00000522243 BRI3BPQ8WY22 251 aa25.54■■□□□ 1.68
SDCBP-209ENST00000522243 GAKO14976 1311 aa25.54■■□□□ 1.68
SDCBP-209ENST00000522243 SPDYE5A6NIY4 337 aa25.53■■□□□ 1.68
SDCBP-209ENST00000522243 ZBTB7BO15156 539 aaPredicted RBP25.53■■□□□ 1.68
SDCBP-209ENST00000522243 INPP5BP32019 993 aa25.53■■□□□ 1.68
SDCBP-209ENST00000522243 GTF2A2P52657 109 aa25.53■■□□□ 1.68
SDCBP-209ENST00000522243 OS9Q13438 667 aaPredicted RBP25.53■■□□□ 1.68
SDCBP-209ENST00000522243 SSH3Q8TE77 659 aa25.53■■□□□ 1.68
SDCBP-209ENST00000522243 HPS5Q9UPZ3 1129 aa25.53■■□□□ 1.68
SDCBP-209ENST00000522243 SURF6O75683 361 aaKnown RBP25.52■■□□□ 1.68
SDCBP-209ENST00000522243 RGS19P49795 217 aa25.52■■□□□ 1.68
SDCBP-209ENST00000522243 SOX10P56693 466 aa25.52■■□□□ 1.68
SDCBP-209ENST00000522243 PKN2Q16513 984 aaKnown RBP25.52■■□□□ 1.68
SDCBP-209ENST00000522243 TBC1D9Q6ZT07 1266 aa25.52■■□□□ 1.68
SDCBP-209ENST00000522243 ERO1BQ86YB8 467 aa25.52■■□□□ 1.68
SDCBP-209ENST00000522243 SPATA5Q8NB90 893 aa25.52■■□□□ 1.68
SDCBP-209ENST00000522243 ARID4AP29374 1257 aaPredicted RBP25.51■■□□□ 1.67
SDCBP-209ENST00000522243 BTDP43251 543 aa25.51■■□□□ 1.67
SDCBP-209ENST00000522243 RGS3P49796 1198 aa25.51■■□□□ 1.67
SDCBP-209ENST00000522243 MLLT1Q03111 559 aaPredicted RBP25.51■■□□□ 1.67
SDCBP-209ENST00000522243 MECOMQ03112 1051 aa25.51■■□□□ 1.67
SDCBP-209ENST00000522243 SLF2Q8IX21 1173 aa25.51■■□□□ 1.67
SDCBP-209ENST00000522243 PANK1Q8TE04 598 aa25.51■■□□□ 1.67
SDCBP-209ENST00000522243 MCAMP43121 646 aa25.5■■□□□ 1.67
SDCBP-209ENST00000522243 DOCK2Q92608 1830 aa25.49■■□□□ 1.67
SDCBP-209ENST00000522243 MROH7-TTC4A0A0A0MT08 1334 aa25.49■■□□□ 1.67
SDCBP-209ENST00000522243 IRF6O14896 467 aa25.49■■□□□ 1.67
SDCBP-209ENST00000522243 TNNI3KQ59H18 835 aa25.49■■□□□ 1.67
SDCBP-209ENST00000522243 FBXO46Q6PJ61 603 aaPredicted RBP25.49■■□□□ 1.67
SDCBP-209ENST00000522243 FAM43AQ8N2R8 423 aa25.49■■□□□ 1.67
SDCBP-209ENST00000522243 ZNF384Q8TF68 577 aa25.49■■□□□ 1.67
SDCBP-209ENST00000522243 FAM163AQ96GL9 167 aaPredicted RBP25.49■■□□□ 1.67
SDCBP-209ENST00000522243 IDI2Q9BXS1 227 aa25.49■■□□□ 1.67
SDCBP-209ENST00000522243 TRIM17Q9Y577 477 aa25.49■■□□□ 1.67
SDCBP-209ENST00000522243 FPGT-TNNI3KV9GXZ4 949 aa25.49■■□□□ 1.67
SDCBP-209ENST00000522243 PICALMQ13492 652 aa25.48■■□□□ 1.67
SDCBP-209ENST00000522243 TAF1CQ15572 869 aaPredicted RBP25.48■■□□□ 1.67
SDCBP-209ENST00000522243 ZSCAN29Q8IWY8 852 aaPredicted RBP25.48■■□□□ 1.67
SDCBP-209ENST00000522243 CD99L2Q8TCZ2 262 aa25.48■■□□□ 1.67
SDCBP-209ENST00000522243 DBNDD2Q9BQY9 259 aa25.48■■□□□ 1.67
SDCBP-209ENST00000522243 RAI14Q9P0K7 980 aa25.48■■□□□ 1.67
SDCBP-209ENST00000522243 ZNF112Q9UJU3 913 aa25.48■■□□□ 1.67
SDCBP-209ENST00000522243 ENTPD3O75355 529 aa25.47■■□□□ 1.67
SDCBP-209ENST00000522243 UQCRFS1P1P0C7P4 283 aa25.47■■□□□ 1.67
SDCBP-209ENST00000522243 PPIL2Q13356 520 aa25.47■■□□□ 1.67
SDCBP-209ENST00000522243 TTC39AQ5SRH9 613 aa25.47■■□□□ 1.67
SDCBP-209ENST00000522243 GPR108Q9NPR9 543 aa25.47■■□□□ 1.67
SDCBP-209ENST00000522243 DDX4Q9NQI0 724 aaKnown RBP25.47■■□□□ 1.67
SDCBP-209ENST00000522243 SNRKQ9NRH2 765 aa25.47■■□□□ 1.67
SDCBP-209ENST00000522243 RFX7Q2KHR2 1363 aa25.46■■□□□ 1.67
SDCBP-209ENST00000522243 WDHD1O75717 1129 aaPredicted RBP25.46■■□□□ 1.67
SDCBP-209ENST00000522243 SLURP2P0DP57 97 aa25.46■■□□□ 1.67
SDCBP-209ENST00000522243 CETPP11597 493 aa25.46■■□□□ 1.67
SDCBP-209ENST00000522243 SNAPC2Q13487 334 aa25.46■■□□□ 1.67
SDCBP-209ENST00000522243 SH3BP5LQ7L8J4 393 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms