RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 PF4P02776 101 aa9.79□□□□□ -0.84
SPIDR-215ENST00000521798 LMNB2Q03252 620 aa9.79□□□□□ -0.84
SPIDR-215ENST00000521798 SNAP47Q5SQN1 464 aa9.79□□□□□ -0.84
SPIDR-215ENST00000521798 PRICKLE2Q7Z3G6 844 aa9.79□□□□□ -0.84
SPIDR-215ENST00000521798 ANAPC16Q96DE5 110 aa9.79□□□□□ -0.84
SPIDR-215ENST00000521798 SRRTQ9BXP5 876 aaKnown RBP9.79□□□□□ -0.84
SPIDR-215ENST00000521798 ZFYVE1Q9HBF4 777 aa9.79□□□□□ -0.84
SPIDR-215ENST00000521798 TIMMDC1Q9NPL8 285 aa9.79□□□□□ -0.84
SPIDR-215ENST00000521798 UBP1Q9NZI7 540 aa9.79□□□□□ -0.84
SPIDR-215ENST00000521798 SALL4Q9UJQ4 1053 aa9.79□□□□□ -0.84
SPIDR-215ENST00000521798 R3HCC1Q9Y3T6 440 aaKnown RBP9.79□□□□□ -0.84
SPIDR-215ENST00000521798 COL4A3BPQ9Y5P4 624 aa9.79□□□□□ -0.84
SPIDR-215ENST00000521798 TMEM2Q9UHN6 1383 aa9.78□□□□□ -0.84
SPIDR-215ENST00000521798 KDM5AP29375 1690 aaKnown RBP9.78□□□□□ -0.84
SPIDR-215ENST00000521798 FAM221BA6H8Z2 402 aa9.78□□□□□ -0.84
SPIDR-215ENST00000521798 PHF20L1A8MW92 1017 aa9.78□□□□□ -0.84
SPIDR-215ENST00000521798 APOBRQ0VD83 1088 aa9.78□□□□□ -0.84
SPIDR-215ENST00000521798 SAMD5Q5TGI4 173 aa9.78□□□□□ -0.84
SPIDR-215ENST00000521798 LYSMD3Q7Z3D4 306 aa9.78□□□□□ -0.84
SPIDR-215ENST00000521798 FILIP1Q7Z7B0 1213 aa9.78□□□□□ -0.84
SPIDR-215ENST00000521798 ANKLE2Q86XL3 938 aa9.78□□□□□ -0.84
SPIDR-215ENST00000521798 OR13H1Q8NG92 308 aa9.78□□□□□ -0.84
SPIDR-215ENST00000521798 TCF12Q99081 682 aa9.78□□□□□ -0.84
SPIDR-215ENST00000521798 CEP44Q9C0F1 390 aa9.78□□□□□ -0.84
SPIDR-215ENST00000521798 CRISPLD1Q9H336 500 aa9.78□□□□□ -0.84
SPIDR-215ENST00000521798 IFT57Q9NWB7 429 aa9.78□□□□□ -0.84
SPIDR-215ENST00000521798 TLR6Q9Y2C9 796 aa9.78□□□□□ -0.84
SPIDR-215ENST00000521798 MED14O60244 1454 aa9.78□□□□□ -0.84
SPIDR-215ENST00000521798 CELA3AP09093 270 aa9.77□□□□□ -0.85
SPIDR-215ENST00000521798 LTKP29376 864 aa9.77□□□□□ -0.85
SPIDR-215ENST00000521798 CAMK2GQ13555 558 aaPredicted RBP9.77□□□□□ -0.85
SPIDR-215ENST00000521798 TNNI3KQ59H18 835 aa9.77□□□□□ -0.85
SPIDR-215ENST00000521798 TPTE2Q6XPS3 522 aa9.77□□□□□ -0.85
SPIDR-215ENST00000521798 NOL8Q76FK4 1167 aaKnown RBP9.77□□□□□ -0.85
SPIDR-215ENST00000521798 SLITRK4Q8IW52 837 aa9.77□□□□□ -0.85
SPIDR-215ENST00000521798 GOLM1Q8NBJ4 401 aa9.77□□□□□ -0.85
SPIDR-215ENST00000521798 SHDQ96IW2 340 aa9.77□□□□□ -0.85
SPIDR-215ENST00000521798 MSRB2Q9Y3D2 182 aa9.77□□□□□ -0.85
SPIDR-215ENST00000521798 PRKAB1Q9Y478 270 aa9.77□□□□□ -0.85
SPIDR-215ENST00000521798 TRPM2O94759 1503 aa9.77□□□□□ -0.85
SPIDR-215ENST00000521798 POLR1AO95602 1720 aaPredicted RBP9.76□□□□□ -0.85
SPIDR-215ENST00000521798 SPHKAPQ2M3C7 1700 aa9.76□□□□□ -0.85
SPIDR-215ENST00000521798 NPHP4O75161 1426 aaPredicted RBP9.76□□□□□ -0.85
SPIDR-215ENST00000521798 TMEM131LA2VDJ0 1609 aa9.76□□□□□ -0.85
SPIDR-215ENST00000521798 UPP2O95045 317 aa9.76□□□□□ -0.85
SPIDR-215ENST00000521798 SMPD1P17405 629 aa9.76□□□□□ -0.85
SPIDR-215ENST00000521798 KCNQ4P56696 695 aa9.76□□□□□ -0.85
SPIDR-215ENST00000521798 GRIN2CQ14957 1233 aa9.76□□□□□ -0.85
SPIDR-215ENST00000521798 CCNJLQ8IV13 435 aa9.76□□□□□ -0.85
SPIDR-215ENST00000521798 CYP4X1Q8N118 509 aa9.76□□□□□ -0.85
SPIDR-215ENST00000521798 NKD1Q969G9 470 aa9.76□□□□□ -0.85
SPIDR-215ENST00000521798 MPHOSPH9Q99550 1183 aa9.76□□□□□ -0.85
SPIDR-215ENST00000521798 SCAF11Q99590 1463 aaKnown RBP9.76□□□□□ -0.85
SPIDR-215ENST00000521798 DNAJC6O75061 913 aa9.75□□□□□ -0.85
SPIDR-215ENST00000521798 SASH3O75995 380 aa9.75□□□□□ -0.85
SPIDR-215ENST00000521798 CRKP46108 304 aa9.75□□□□□ -0.85
SPIDR-215ENST00000521798 AGMOQ6ZNB7 445 aa9.75□□□□□ -0.85
SPIDR-215ENST00000521798 FAM196AQ6ZSG2 479 aa9.75□□□□□ -0.85
SPIDR-215ENST00000521798 ZCCHC2Q9C0B9 1178 aaKnown RBP9.75□□□□□ -0.85
SPIDR-215ENST00000521798 CCDC113Q9H0I3 377 aa9.75□□□□□ -0.85
SPIDR-215ENST00000521798 SPC25Q9HBM1 224 aa9.75□□□□□ -0.85
SPIDR-215ENST00000521798 PCDH12Q9NPG4 1184 aa9.75□□□□□ -0.85
SPIDR-215ENST00000521798 CLTCL1P53675 1640 aa9.74□□□□□ -0.85
SPIDR-215ENST00000521798 ZFYVE9O95405 1425 aa9.74□□□□□ -0.85
SPIDR-215ENST00000521798 SMAD7O15105 426 aaKnown RBP9.74□□□□□ -0.85
SPIDR-215ENST00000521798 MMP20O60882 483 aa9.74□□□□□ -0.85
SPIDR-215ENST00000521798 CDC45O75419 566 aa9.74□□□□□ -0.85
SPIDR-215ENST00000521798 NLRP8Q86W28 1048 aa9.74□□□□□ -0.85
SPIDR-215ENST00000521798 SH3TC2Q8TF17 1288 aa9.74□□□□□ -0.85
SPIDR-215ENST00000521798 CNTNAP3BQ96NU0 1288 aa9.74□□□□□ -0.85
SPIDR-215ENST00000521798 ZKSCAN3Q9BRR0 538 aa9.74□□□□□ -0.85
SPIDR-215ENST00000521798 LRRC3Q9BY71 257 aa9.74□□□□□ -0.85
SPIDR-215ENST00000521798 CNTNAP3Q9BZ76 1288 aa9.74□□□□□ -0.85
SPIDR-215ENST00000521798 TMX1Q9H3N1 280 aa9.74□□□□□ -0.85
SPIDR-215ENST00000521798 TOR4AQ9NXH8 423 aa9.74□□□□□ -0.85
SPIDR-215ENST00000521798 KCNH4Q9UQ05 1017 aa9.74□□□□□ -0.85
SPIDR-215ENST00000521798 MYO5BQ9ULV0 1848 aa9.73□□□□□ -0.85
SPIDR-215ENST00000521798 CCDC85CA6NKD9 419 aa9.73□□□□□ -0.85
SPIDR-215ENST00000521798 KIF4AO95239 1232 aa9.73□□□□□ -0.85
SPIDR-215ENST00000521798 RHOQP17081 205 aa9.73□□□□□ -0.85
SPIDR-215ENST00000521798 TFE3P19532 575 aaPredicted RBP9.73□□□□□ -0.85
SPIDR-215ENST00000521798 CHMP4BP1P59074 171 aa9.73□□□□□ -0.85
SPIDR-215ENST00000521798 RPS26P62854 115 aaKnown RBP9.73□□□□□ -0.85
SPIDR-215ENST00000521798 CCINQ13939 588 aa9.73□□□□□ -0.85
SPIDR-215ENST00000521798 TTBK2Q6IQ55 1244 aa9.73□□□□□ -0.85
SPIDR-215ENST00000521798 CCDC81Q6ZN84 652 aa9.73□□□□□ -0.85
SPIDR-215ENST00000521798 FANCLQ9NW38 375 aa9.73□□□□□ -0.85
SPIDR-215ENST00000521798 KLHL42Q9P2K6 505 aa9.73□□□□□ -0.85
SPIDR-215ENST00000521798 EID1Q9Y6B2 187 aa9.73□□□□□ -0.85
SPIDR-215ENST00000521798 LTBP4Q8N2S1 1624 aa9.73□□□□□ -0.85
SPIDR-215ENST00000521798 ZNF335Q9H4Z2 1342 aaPredicted RBP9.73□□□□□ -0.85
SPIDR-215ENST00000521798 IQGAP1P46940 1657 aa9.73□□□□□ -0.85
SPIDR-215ENST00000521798 ROBO2Q9HCK4 1378 aa9.73□□□□□ -0.85
SPIDR-215ENST00000521798 RIMS2Q9UQ26 1411 aa9.73□□□□□ -0.85
SPIDR-215ENST00000521798 ENC1O14682 589 aa9.72□□□□□ -0.85
SPIDR-215ENST00000521798 GDF9O60383 454 aa9.72□□□□□ -0.85
SPIDR-215ENST00000521798 ITPKAP23677 461 aa9.72□□□□□ -0.85
SPIDR-215ENST00000521798 TARSP26639 723 aaKnown RBP9.72□□□□□ -0.85
SPIDR-215ENST00000521798 KRT25Q7Z3Z0 450 aa9.72□□□□□ -0.85
SPIDR-215ENST00000521798 CELF2-AS1Q8N7Q2 184 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms