RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 GJA5P36382 358 aa14.2□□□□□ -0.14
CSMD1-210ENST00000521646 TTLL5Q6EMB2 1281 aa14.2□□□□□ -0.14
CSMD1-210ENST00000521646 CD209Q9NNX6 404 aa14.2□□□□□ -0.14
CSMD1-210ENST00000521646 GPR25O00155 361 aa14.19□□□□□ -0.14
CSMD1-210ENST00000521646 VAMP4O75379 141 aa14.19□□□□□ -0.14
CSMD1-210ENST00000521646 CALD1Q05682 793 aaKnown RBP14.19□□□□□ -0.14
CSMD1-210ENST00000521646 CCDC27Q2M243 656 aa14.19□□□□□ -0.14
CSMD1-210ENST00000521646 CDCA7LQ96GN5 454 aa14.19□□□□□ -0.14
CSMD1-210ENST00000521646 ZNF594Q96JF6 807 aaPredicted RBP14.19□□□□□ -0.14
CSMD1-210ENST00000521646 SEPT9Q9UHD8 586 aaPredicted RBP14.19□□□□□ -0.14
CSMD1-210ENST00000521646 LEMD3Q9Y2U8 911 aa14.19□□□□□ -0.14
CSMD1-210ENST00000521646 ECM29Q5VYK3 1845 aa14.19□□□□□ -0.14
CSMD1-210ENST00000521646 HSP90B1P14625 803 aaKnown RBP14.18□□□□□ -0.14
CSMD1-210ENST00000521646 PRSS12P56730 875 aa14.18□□□□□ -0.14
CSMD1-210ENST00000521646 SPRYD7Q5W111 196 aa14.18□□□□□ -0.14
CSMD1-210ENST00000521646 LAPTM4BQ86VI4 370 aa14.18□□□□□ -0.14
CSMD1-210ENST00000521646 DNAAF4Q8WXU2 420 aa14.18□□□□□ -0.14
CSMD1-210ENST00000521646 CDHR5Q9HBB8 845 aa14.18□□□□□ -0.14
CSMD1-210ENST00000521646 IGF2BP3O00425 579 aaKnown RBP eCLIP14.17□□□□□ -0.14
CSMD1-210ENST00000521646 IGHMBP2P38935 993 aaKnown RBP14.17□□□□□ -0.14
CSMD1-210ENST00000521646 TTLL12Q14166 644 aaPredicted RBP14.17□□□□□ -0.14
CSMD1-210ENST00000521646 BEND3Q5T5X7 828 aa14.17□□□□□ -0.14
CSMD1-210ENST00000521646 THSD4Q6ZMP0 1018 aa14.17□□□□□ -0.14
CSMD1-210ENST00000521646 PRMT6Q96LA8 375 aaPredicted RBP14.17□□□□□ -0.14
CSMD1-210ENST00000521646 CLRN2A0PK11 232 aa14.16□□□□□ -0.14
CSMD1-210ENST00000521646 F8W031 263 aaPredicted RBP14.16□□□□□ -0.14
CSMD1-210ENST00000521646 NEXNQ0ZGT2 675 aa14.16□□□□□ -0.14
CSMD1-210ENST00000521646 FKBP5Q13451 457 aaPredicted RBP14.16□□□□□ -0.14
CSMD1-210ENST00000521646 GRIK5Q16478 980 aa14.16□□□□□ -0.14
CSMD1-210ENST00000521646 ANKK1Q8NFD2 765 aa14.16□□□□□ -0.14
CSMD1-210ENST00000521646 LINS1Q8NG48 757 aa14.16□□□□□ -0.14
CSMD1-210ENST00000521646 KAZALD1Q96I82 304 aa14.16□□□□□ -0.14
CSMD1-210ENST00000521646 STK31Q9BXU1 1019 aa14.16□□□□□ -0.14
CSMD1-210ENST00000521646 DEFB129Q9H1M3 183 aa14.16□□□□□ -0.14
CSMD1-210ENST00000521646 ANGEL1Q9UNK9 670 aaKnown RBP14.16□□□□□ -0.14
CSMD1-210ENST00000521646 SALL2Q9Y467 1007 aaPredicted RBP14.16□□□□□ -0.14
CSMD1-210ENST00000521646 MYO3BQ8WXR4 1341 aa14.15□□□□□ -0.14
CSMD1-210ENST00000521646 SEMA3EO15041 775 aa14.15□□□□□ -0.14
CSMD1-210ENST00000521646 IL1R1P14778 569 aa14.15□□□□□ -0.14
CSMD1-210ENST00000521646 EXOSC9Q06265 439 aaKnown RBP14.15□□□□□ -0.14
CSMD1-210ENST00000521646 NBPF12Q5TAG4 269 aaPredicted RBP14.15□□□□□ -0.14
CSMD1-210ENST00000521646 C15orf52Q6ZUT6 534 aaKnown RBP14.15□□□□□ -0.14
CSMD1-210ENST00000521646 OGFOD1Q8N543 542 aa14.15□□□□□ -0.14
CSMD1-210ENST00000521646 ZFRQ96KR1 1074 aaKnown RBP14.15□□□□□ -0.14
CSMD1-210ENST00000521646 PTPN18Q99952 460 aa14.15□□□□□ -0.14
CSMD1-210ENST00000521646 CFHR5Q9BXR6 569 aa14.15□□□□□ -0.14
CSMD1-210ENST00000521646 IL16Q14005 1332 aa14.15□□□□□ -0.15
CSMD1-210ENST00000521646 ZSWIM8A7E2V4 1837 aa14.14□□□□□ -0.15
CSMD1-210ENST00000521646 MAP3K11Q16584 847 aa14.14□□□□□ -0.15
CSMD1-210ENST00000521646 MPHOSPH8Q99549 860 aa14.14□□□□□ -0.15
CSMD1-210ENST00000521646 PUS3Q9BZE2 481 aaKnown RBP14.14□□□□□ -0.15
CSMD1-210ENST00000521646 ANKRD2Q9GZV1 360 aa14.14□□□□□ -0.15
CSMD1-210ENST00000521646 CACNA1FO60840 1977 aa14.13□□□□□ -0.15
CSMD1-210ENST00000521646 CFAP100Q494V2 611 aa14.13□□□□□ -0.15
CSMD1-210ENST00000521646 NOM1Q5C9Z4 860 aaKnown RBP14.13□□□□□ -0.15
CSMD1-210ENST00000521646 LMBR1LQ6UX01 489 aa14.13□□□□□ -0.15
CSMD1-210ENST00000521646 APOBEC3FQ8IUX4 373 aaKnown RBP14.13□□□□□ -0.15
CSMD1-210ENST00000521646 MTMR14Q8NCE2 650 aa14.13□□□□□ -0.15
CSMD1-210ENST00000521646 WNK4Q96J92 1243 aa14.13□□□□□ -0.15
CSMD1-210ENST00000521646 ARAP2Q8WZ64 1704 aa14.12□□□□□ -0.15
CSMD1-210ENST00000521646 COL1A1P02452 1464 aaPredicted RBP14.12□□□□□ -0.15
CSMD1-210ENST00000521646 ANKRD18BA2A2Z9 1011 aa14.12□□□□□ -0.15
CSMD1-210ENST00000521646 USP2O75604 605 aaPredicted RBP14.12□□□□□ -0.15
CSMD1-210ENST00000521646 TEPSINQ96N21 525 aa14.12□□□□□ -0.15
CSMD1-210ENST00000521646 HDAC9Q9UKV0 1011 aa14.12□□□□□ -0.15
CSMD1-210ENST00000521646 DLGAP5Q15398 846 aa14.11□□□□□ -0.15
CSMD1-210ENST00000521646 FBXO46Q6PJ61 603 aaPredicted RBP14.11□□□□□ -0.15
CSMD1-210ENST00000521646 SUCLG2Q96I99 432 aa14.11□□□□□ -0.15
CSMD1-210ENST00000521646 SMAPO00193 183 aa14.1□□□□□ -0.15
CSMD1-210ENST00000521646 PLIN1O60240 522 aa14.1□□□□□ -0.15
CSMD1-210ENST00000521646 FKTNO75072 461 aa14.1□□□□□ -0.15
CSMD1-210ENST00000521646 GYG1P46976 350 aa14.1□□□□□ -0.15
CSMD1-210ENST00000521646 KCNJ4P48050 445 aa14.1□□□□□ -0.15
CSMD1-210ENST00000521646 IFIT5Q13325 482 aaKnown RBP14.1□□□□□ -0.15
CSMD1-210ENST00000521646 OTOP1Q7RTM1 612 aa14.1□□□□□ -0.15
CSMD1-210ENST00000521646 ARMC9Q7Z3E5 817 aa14.1□□□□□ -0.15
CSMD1-210ENST00000521646 MYH16Q9H6N6 1097 aa14.1□□□□□ -0.15
CSMD1-210ENST00000521646 PLA2G2EQ9NZK7 142 aa14.1□□□□□ -0.15
CSMD1-210ENST00000521646 SZT2Q5T011 3432 aa14.09□□□□□ -0.15
CSMD1-210ENST00000521646 NF2P35240 595 aa14.09□□□□□ -0.15
CSMD1-210ENST00000521646 SREBF2Q12772 1141 aa14.09□□□□□ -0.15
CSMD1-210ENST00000521646 CRHR2Q13324 411 aa14.09□□□□□ -0.15
CSMD1-210ENST00000521646 RASA3Q14644 834 aa14.09□□□□□ -0.15
CSMD1-210ENST00000521646 PKN2Q16513 984 aaKnown RBP14.09□□□□□ -0.15
CSMD1-210ENST00000521646 PRPF38BQ5VTL8 546 aaKnown RBP14.09□□□□□ -0.15
CSMD1-210ENST00000521646 TDRD7Q8NHU6 1098 aaKnown RBP14.09□□□□□ -0.15
CSMD1-210ENST00000521646 FAM84BQ96KN1 310 aaPredicted RBP14.09□□□□□ -0.15
CSMD1-210ENST00000521646 VEZTQ9HBM0 779 aa14.09□□□□□ -0.15
CSMD1-210ENST00000521646 FAM198AQ9UFP1 575 aa14.09□□□□□ -0.15
CSMD1-210ENST00000521646 PNMA3Q9UL41 463 aa14.09□□□□□ -0.15
CSMD1-210ENST00000521646 CHMP3Q9Y3E7 222 aa14.09□□□□□ -0.15
CSMD1-210ENST00000521646 FAM205AQ6ZU69 1335 aa14.09□□□□□ -0.15
CSMD1-210ENST00000521646 KIAA0100Q14667 2235 aaKnown RBP14.09□□□□□ -0.15
CSMD1-210ENST00000521646 GRM8O00222 908 aa14.08□□□□□ -0.16
CSMD1-210ENST00000521646 NBPF7P0C2Y1 421 aaPredicted RBP14.08□□□□□ -0.16
CSMD1-210ENST00000521646 BCAMP50895 628 aa14.08□□□□□ -0.16
CSMD1-210ENST00000521646 FKBP1AP62942 108 aaKnown RBP14.08□□□□□ -0.16
CSMD1-210ENST00000521646 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.08□□□□□ -0.16
CSMD1-210ENST00000521646 CD99L2Q8TCZ2 262 aa14.08□□□□□ -0.16
CSMD1-210ENST00000521646 TATDN2Q93075 761 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms