RNA–Protein interactions for RNA: ENST00000521338.1

PCM1-214, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-214ENST00000521338 ZFYVE1Q9HBF4 777 aa6.38□□□□□ -1.39
PCM1-214ENST00000521338 LGR6Q9HBX8 967 aa6.38□□□□□ -1.39
PCM1-214ENST00000521338 RAD18Q9NS91 495 aa6.38□□□□□ -1.39
PCM1-214ENST00000521338 AP4E1Q9UPM8 1137 aa6.38□□□□□ -1.39
PCM1-214ENST00000521338 DAGLAQ9Y4D2 1042 aa6.38□□□□□ -1.39
PCM1-214ENST00000521338 SSFA2P28290 1259 aa6.37□□□□□ -1.39
PCM1-214ENST00000521338 CYP27C1Q4G0S4 372 aa6.37□□□□□ -1.39
PCM1-214ENST00000521338 CILP2Q8IUL8 1156 aa6.37□□□□□ -1.39
PCM1-214ENST00000521338 TMEM40Q8WWA1 233 aa6.37□□□□□ -1.39
PCM1-214ENST00000521338 FAM168AQ92567 244 aa6.37□□□□□ -1.39
PCM1-214ENST00000521338 LIN7BQ9HAP6 207 aa6.37□□□□□ -1.39
PCM1-214ENST00000521338 CCDC87Q9NVE4 849 aa6.37□□□□□ -1.39
PCM1-214ENST00000521338 CD96P40200 585 aa6.36□□□□□ -1.39
PCM1-214ENST00000521338 MESP2Q0VG99 397 aa6.36□□□□□ -1.39
PCM1-214ENST00000521338 FAM181AQ8N9Y4 354 aa6.36□□□□□ -1.39
PCM1-214ENST00000521338 NETO1Q8TDF5 533 aa6.36□□□□□ -1.39
PCM1-214ENST00000521338 CORO1BQ9BR76 489 aa6.36□□□□□ -1.39
PCM1-214ENST00000521338 RC3H2Q9HBD1 1191 aaKnown RBP6.36□□□□□ -1.39
PCM1-214ENST00000521338 VAV3Q9UKW4 847 aa6.36□□□□□ -1.39
PCM1-214ENST00000521338 TMPRSS2O15393 492 aa6.35□□□□□ -1.39
PCM1-214ENST00000521338 FAM13AO94988 1023 aa6.35□□□□□ -1.39
PCM1-214ENST00000521338 ITPKAP23677 461 aa6.35□□□□□ -1.39
PCM1-214ENST00000521338 CDK5R2Q13319 367 aa6.35□□□□□ -1.39
PCM1-214ENST00000521338 LRRN4CLQ8ND94 238 aa6.35□□□□□ -1.39
PCM1-214ENST00000521338 WDR89Q96FK6 387 aaPredicted RBP6.35□□□□□ -1.39
PCM1-214ENST00000521338 ZNF576Q9H609 170 aa6.35□□□□□ -1.39
PCM1-214ENST00000521338 CRIM1Q9NZV1 1036 aa6.35□□□□□ -1.39
PCM1-214ENST00000521338 TMEM88BA6NKF7 163 aa6.34□□□□□ -1.39
PCM1-214ENST00000521338 FAM87AP0C7U9 286 aa6.34□□□□□ -1.39
PCM1-214ENST00000521338 PRKCQQ04759 706 aa6.34□□□□□ -1.39
PCM1-214ENST00000521338 AAMPQ13685 434 aa6.34□□□□□ -1.39
PCM1-214ENST00000521338 KIAA0319Q5VV43 1072 aa6.34□□□□□ -1.39
PCM1-214ENST00000521338 USPL1Q5W0Q7 1092 aa6.33□□□□□ -1.4
PCM1-214ENST00000521338 PHLDB3Q6NSJ2 640 aa6.33□□□□□ -1.4
PCM1-214ENST00000521338 PLAGL2Q9UPG8 496 aa6.33□□□□□ -1.4
PCM1-214ENST00000521338 PCDHGC5Q9Y5F6 944 aa6.33□□□□□ -1.4
PCM1-214ENST00000521338 FKBP4Q02790 459 aaKnown RBP eCLIP6.32□□□□□ -1.4
PCM1-214ENST00000521338 PI4K2BQ8TCG2 481 aa6.32□□□□□ -1.4
PCM1-214ENST00000521338 FANCD2OSQ96PS1 177 aa6.32□□□□□ -1.4
PCM1-214ENST00000521338 CCDC86Q9H6F5 360 aaKnown RBP6.32□□□□□ -1.4
PCM1-214ENST00000521338 MKNK2Q9HBH9 465 aa6.32□□□□□ -1.4
PCM1-214ENST00000521338 DISC1Q9NRI5 854 aa6.32□□□□□ -1.4
PCM1-214ENST00000521338 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.32□□□□□ -1.4
PCM1-214ENST00000521338 ZNF862O60290 1169 aa6.31□□□□□ -1.4
PCM1-214ENST00000521338 LEFTY1O75610 366 aa6.31□□□□□ -1.4
PCM1-214ENST00000521338 LIG1P18858 919 aa6.31□□□□□ -1.4
PCM1-214ENST00000521338 OXCT1P55809 520 aa6.31□□□□□ -1.4
PCM1-214ENST00000521338 AP3B2Q13367 1082 aa6.31□□□□□ -1.4
PCM1-214ENST00000521338 SF3B2Q13435 895 aaKnown RBP6.31□□□□□ -1.4
PCM1-214ENST00000521338 PDE3AQ14432 1141 aa6.31□□□□□ -1.4
PCM1-214ENST00000521338 IFI16Q16666 785 aaKnown RBP6.31□□□□□ -1.4
PCM1-214ENST00000521338 KRTAP19-4Q3LI73 84 aa6.31□□□□□ -1.4
PCM1-214ENST00000521338 KSR1Q8IVT5 923 aa6.31□□□□□ -1.4
PCM1-214ENST00000521338 DDX54Q8TDD1 881 aaKnown RBP6.31□□□□□ -1.4
PCM1-214ENST00000521338 PTPN12Q05209 780 aaKnown RBP6.3□□□□□ -1.4
PCM1-214ENST00000521338 AOC3Q16853 763 aa6.3□□□□□ -1.4
PCM1-214ENST00000521338 BHLHE22Q8NFJ8 381 aaPredicted RBP6.3□□□□□ -1.4
PCM1-214ENST00000521338 FAM84AQ96KN4 292 aa6.3□□□□□ -1.4
PCM1-214ENST00000521338 KRTAP4-5Q9BYR2 181 aa6.3□□□□□ -1.4
PCM1-214ENST00000521338 ZNF503-AS2A6NEH8 195 aa6.29□□□□□ -1.4
PCM1-214ENST00000521338 PKN1Q16512 942 aa6.29□□□□□ -1.4
PCM1-214ENST00000521338 ECM1Q16610 540 aa6.29□□□□□ -1.4
PCM1-214ENST00000521338 SMYD4Q8IYR2 804 aaPredicted RBP6.29□□□□□ -1.4
PCM1-214ENST00000521338 FLAD1Q8NFF5 587 aa6.29□□□□□ -1.4
PCM1-214ENST00000521338 DUSP23Q9BVJ7 150 aa6.29□□□□□ -1.4
PCM1-214ENST00000521338 TNKS2Q9H2K2 1166 aa6.29□□□□□ -1.4
PCM1-214ENST00000521338 ABCB6Q9NP58 842 aa6.29□□□□□ -1.4
PCM1-214ENST00000521338 CEACAM5P06731 702 aa6.28□□□□□ -1.4
PCM1-214ENST00000521338 ID3Q02535 119 aa6.28□□□□□ -1.4
PCM1-214ENST00000521338 FAAP100Q0VG06 881 aa6.28□□□□□ -1.4
PCM1-214ENST00000521338 KIF4BQ2VIQ3 1234 aa6.28□□□□□ -1.4
PCM1-214ENST00000521338 SLC23A3Q6PIS1 610 aa6.28□□□□□ -1.4
PCM1-214ENST00000521338 FAM214BQ7L5A3 538 aa6.28□□□□□ -1.4
PCM1-214ENST00000521338 CCER1Q8TC90 406 aaPredicted RBP6.28□□□□□ -1.4
PCM1-214ENST00000521338 HRASLS5Q96KN8 279 aa6.28□□□□□ -1.4
PCM1-214ENST00000521338 ATXN3LQ9H3M9 355 aa6.28□□□□□ -1.4
PCM1-214ENST00000521338 TMEM265A0A087WTH1 108 aa6.27□□□□□ -1.41
PCM1-214ENST00000521338 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.27□□□□□ -1.41
PCM1-214ENST00000521338 TTLL4Q14679 1199 aa6.27□□□□□ -1.41
PCM1-214ENST00000521338 RPS26P11Q5JNZ5 115 aaPredicted RBP6.27□□□□□ -1.41
PCM1-214ENST00000521338 C1QL4Q86Z23 238 aa6.27□□□□□ -1.41
PCM1-214ENST00000521338 HEXIM2Q96MH2 286 aaKnown RBP6.27□□□□□ -1.41
PCM1-214ENST00000521338 SLC38A3Q99624 504 aa6.27□□□□□ -1.41
PCM1-214ENST00000521338 EHD4Q9H223 541 aa6.27□□□□□ -1.41
PCM1-214ENST00000521338 PIDD1Q9HB75 910 aa6.27□□□□□ -1.41
PCM1-214ENST00000521338 ANO2Q9NQ90 1003 aa6.27□□□□□ -1.41
PCM1-214ENST00000521338 NEFMP07197 916 aa6.26□□□□□ -1.41
PCM1-214ENST00000521338 SLFN14P0C7P3 912 aa6.26□□□□□ -1.41
PCM1-214ENST00000521338 ZNF211Q13398 564 aaPredicted RBP6.26□□□□□ -1.41
PCM1-214ENST00000521338 LCE5AQ5TCM9 118 aa6.26□□□□□ -1.41
PCM1-214ENST00000521338 PRPF40BQ6NWY9 871 aaKnown RBP6.26□□□□□ -1.41
PCM1-214ENST00000521338 ZC3H12CQ9C0D7 883 aaKnown RBP6.26□□□□□ -1.41
PCM1-214ENST00000521338 NPHS2Q9NP85 383 aa6.26□□□□□ -1.41
PCM1-214ENST00000521338 PRDM7Q9NQW5 492 aa6.26□□□□□ -1.41
PCM1-214ENST00000521338 KRT82Q9NSB4 513 aa6.26□□□□□ -1.41
PCM1-214ENST00000521338 SERPINA10Q9UK55 444 aa6.26□□□□□ -1.41
PCM1-214ENST00000521338 PCOLCE2Q9UKZ9 415 aa6.26□□□□□ -1.41
PCM1-214ENST00000521338 LRRC10BA6NIK2 292 aa6.25□□□□□ -1.41
PCM1-214ENST00000521338 ZNF865P0CJ78 1059 aaPredicted RBP6.25□□□□□ -1.41
PCM1-214ENST00000521338 HCLS1P14317 486 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms