RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 TCP10Q12799 353 aa14.41□□□□□ -0.1
MRPS28-206ENST00000520946 PUM3Q15397 648 aaKnown RBP14.41□□□□□ -0.1
MRPS28-206ENST00000520946 LRRC24Q50LG9 513 aa14.41□□□□□ -0.1
MRPS28-206ENST00000520946 HHIPL2Q6UWX4 724 aa14.41□□□□□ -0.1
MRPS28-206ENST00000520946 CHRDL2Q6WN34 429 aa14.41□□□□□ -0.1
MRPS28-206ENST00000520946 ANKRD23Q86SG2 305 aa14.41□□□□□ -0.1
MRPS28-206ENST00000520946 WDR66Q8TBY9 1149 aa14.41□□□□□ -0.1
MRPS28-206ENST00000520946 SRRDQ9UH36 339 aa14.41□□□□□ -0.1
MRPS28-206ENST00000520946 NR2E3Q9Y5X4 410 aa14.41□□□□□ -0.1
MRPS28-206ENST00000520946 OTOFQ9HC10 1997 aa14.41□□□□□ -0.1
MRPS28-206ENST00000520946 MYPNQ86TC9 1320 aa14.41□□□□□ -0.1
MRPS28-206ENST00000520946 LAMB1P07942 1786 aa14.4□□□□□ -0.1
MRPS28-206ENST00000520946 FCGRTP55899 365 aa14.4□□□□□ -0.1
MRPS28-206ENST00000520946 APOBEC3HQ6NTF7 200 aaKnown RBP14.4□□□□□ -0.1
MRPS28-206ENST00000520946 FAM151AQ8WW52 585 aa14.4□□□□□ -0.1
MRPS28-206ENST00000520946 PARK7Q99497 189 aaKnown RBP14.4□□□□□ -0.1
MRPS28-206ENST00000520946 RNF208Q9H0X6 261 aa14.4□□□□□ -0.1
MRPS28-206ENST00000520946 GNL3LQ9NVN8 582 aaKnown RBP14.4□□□□□ -0.1
MRPS28-206ENST00000520946 A0A1B0GUL6 1792 aa14.39□□□□□ -0.11
MRPS28-206ENST00000520946 INPP5BP32019 993 aa14.39□□□□□ -0.11
MRPS28-206ENST00000520946 MTFR1Q15390 333 aa14.39□□□□□ -0.11
MRPS28-206ENST00000520946 C17orf99Q6UX52 265 aa14.39□□□□□ -0.11
MRPS28-206ENST00000520946 SPINK5Q9NQ38 1064 aaPredicted RBP14.39□□□□□ -0.11
MRPS28-206ENST00000520946 CCL5P13501 91 aa14.38□□□□□ -0.11
MRPS28-206ENST00000520946 OSBPP22059 807 aa14.38□□□□□ -0.11
MRPS28-206ENST00000520946 PICK1Q9NRD5 415 aa14.38□□□□□ -0.11
MRPS28-206ENST00000520946 AK9Q5TCS8 1911 aa14.38□□□□□ -0.11
MRPS28-206ENST00000520946 LDHBP07195 334 aaKnown RBP14.37□□□□□ -0.11
MRPS28-206ENST00000520946 RABL6Q3YEC7 729 aaPredicted RBP14.37□□□□□ -0.11
MRPS28-206ENST00000520946 FASTKD5Q7L8L6 764 aaKnown RBP14.37□□□□□ -0.11
MRPS28-206ENST00000520946 ZSCAN29Q8IWY8 852 aaPredicted RBP14.37□□□□□ -0.11
MRPS28-206ENST00000520946 FAM9BQ8IZU0 186 aa14.37□□□□□ -0.11
MRPS28-206ENST00000520946 KLHDC4Q8TBB5 520 aa14.37□□□□□ -0.11
MRPS28-206ENST00000520946 LPIN2Q92539 896 aa14.37□□□□□ -0.11
MRPS28-206ENST00000520946 KAZALD1Q96I82 304 aa14.37□□□□□ -0.11
MRPS28-206ENST00000520946 USP40Q9NVE5 1235 aa14.37□□□□□ -0.11
MRPS28-206ENST00000520946 TAOK2Q9UL54 1235 aa14.37□□□□□ -0.11
MRPS28-206ENST00000520946 ARAP2Q8WZ64 1704 aa14.37□□□□□ -0.11
MRPS28-206ENST00000520946 RPAP1Q9BWH6 1393 aaPredicted RBP14.36□□□□□ -0.11
MRPS28-206ENST00000520946 CXCL11O14625 94 aa14.36□□□□□ -0.11
MRPS28-206ENST00000520946 GJB1P08034 283 aa14.36□□□□□ -0.11
MRPS28-206ENST00000520946 GJA8P48165 433 aa14.36□□□□□ -0.11
MRPS28-206ENST00000520946 SLAIN1Q8ND83 568 aa14.36□□□□□ -0.11
MRPS28-206ENST00000520946 LRRFIP2Q9Y608 721 aaKnown RBP14.36□□□□□ -0.11
MRPS28-206ENST00000520946 UTYO14607 1347 aa14.36□□□□□ -0.11
MRPS28-206ENST00000520946 FARP2O94887 1054 aaPredicted RBP14.35□□□□□ -0.11
MRPS28-206ENST00000520946 TFRCP02786 760 aaKnown RBP14.35□□□□□ -0.11
MRPS28-206ENST00000520946 PRKCZQ05513 592 aa14.35□□□□□ -0.11
MRPS28-206ENST00000520946 CDC42EP5Q6NZY7 148 aa14.35□□□□□ -0.11
MRPS28-206ENST00000520946 GADL1Q6ZQY3 521 aa14.35□□□□□ -0.11
MRPS28-206ENST00000520946 ANKRD44Q8N8A2 993 aa14.35□□□□□ -0.11
MRPS28-206ENST00000520946 VGLL2Q8N8G2 317 aa14.35□□□□□ -0.11
MRPS28-206ENST00000520946 SMCR8Q8TEV9 937 aaPredicted RBP14.35□□□□□ -0.11
MRPS28-206ENST00000520946 CEP126Q9P2H0 1117 aa14.35□□□□□ -0.11
MRPS28-206ENST00000520946 RBM27Q9P2N5 1060 aaKnown RBP14.35□□□□□ -0.11
MRPS28-206ENST00000520946 KCNH4Q9UQ05 1017 aa14.35□□□□□ -0.11
MRPS28-206ENST00000520946 ZHX2Q9Y6X8 837 aa14.35□□□□□ -0.11
MRPS28-206ENST00000520946 KIF16BQ96L93 1317 aa14.35□□□□□ -0.11
MRPS28-206ENST00000520946 EYA2O00167 538 aa14.34□□□□□ -0.11
MRPS28-206ENST00000520946 EVI5O60447 810 aa14.34□□□□□ -0.11
MRPS28-206ENST00000520946 CYP2C8P10632 490 aa14.34□□□□□ -0.11
MRPS28-206ENST00000520946 DIXDC1Q155Q3 683 aa14.34□□□□□ -0.11
MRPS28-206ENST00000520946 ZNF112Q9UJU3 913 aa14.34□□□□□ -0.11
MRPS28-206ENST00000520946 DAGLAQ9Y4D2 1042 aa14.34□□□□□ -0.11
MRPS28-206ENST00000520946 PTPRCP08575 1304 aa14.34□□□□□ -0.11
MRPS28-206ENST00000520946 TNPO2O14787 897 aaKnown RBP14.33□□□□□ -0.12
MRPS28-206ENST00000520946 ADCY3O60266 1144 aa14.33□□□□□ -0.12
MRPS28-206ENST00000520946 CTGFP29279 349 aa14.33□□□□□ -0.12
MRPS28-206ENST00000520946 NOL9Q5SY16 702 aaKnown RBP14.33□□□□□ -0.12
MRPS28-206ENST00000520946 SLF2Q8IX21 1173 aa14.33□□□□□ -0.12
MRPS28-206ENST00000520946 ZGPATQ8N5A5 531 aaKnown RBP14.33□□□□□ -0.12
MRPS28-206ENST00000520946 U2AF1L4Q8WU68 220 aaKnown RBP14.33□□□□□ -0.12
MRPS28-206ENST00000520946 SHISA4Q96DD7 197 aa14.33□□□□□ -0.12
MRPS28-206ENST00000520946 SIL1Q9H173 461 aa14.33□□□□□ -0.12
MRPS28-206ENST00000520946 DENND2AQ9ULE3 1009 aa14.33□□□□□ -0.12
MRPS28-206ENST00000520946 FGFR2P21802 821 aa14.32□□□□□ -0.12
MRPS28-206ENST00000520946 PRDX5P30044 214 aa14.32□□□□□ -0.12
MRPS28-206ENST00000520946 NFIAQ12857 509 aa14.32□□□□□ -0.12
MRPS28-206ENST00000520946 ATP2B3Q16720 1220 aa14.32□□□□□ -0.12
MRPS28-206ENST00000520946 DZIP1Q86YF9 867 aaKnown RBP14.32□□□□□ -0.12
MRPS28-206ENST00000520946 SCYL3Q8IZE3 742 aa14.32□□□□□ -0.12
MRPS28-206ENST00000520946 COA7Q96BR5 231 aa14.32□□□□□ -0.12
MRPS28-206ENST00000520946 UNC93B1Q9H1C4 597 aa14.32□□□□□ -0.12
MRPS28-206ENST00000520946 HDAC5Q9UQL6 1122 aa14.32□□□□□ -0.12
MRPS28-206ENST00000520946 SGPL1O95470 568 aa14.31□□□□□ -0.12
MRPS28-206ENST00000520946 MRPL50Q8N5N7 158 aaKnown RBP14.31□□□□□ -0.12
MRPS28-206ENST00000520946 SLC17A8Q8NDX2 589 aa14.31□□□□□ -0.12
MRPS28-206ENST00000520946 USP44Q9H0E7 712 aa14.31□□□□□ -0.12
MRPS28-206ENST00000520946 GABRQQ9UN88 632 aa14.31□□□□□ -0.12
MRPS28-206ENST00000520946 ZSWIM8A7E2V4 1837 aa14.31□□□□□ -0.12
MRPS28-206ENST00000520946 SEMA3EO15041 775 aa14.3□□□□□ -0.12
MRPS28-206ENST00000520946 UBTFL1P0CB47 393 aaPredicted RBP14.3□□□□□ -0.12
MRPS28-206ENST00000520946 BCRP11274 1271 aa14.3□□□□□ -0.12
MRPS28-206ENST00000520946 CAPN2P17655 700 aa14.3□□□□□ -0.12
MRPS28-206ENST00000520946 FLT3LGP49771 235 aa14.3□□□□□ -0.12
MRPS28-206ENST00000520946 RGS3P49796 1198 aa14.3□□□□□ -0.12
MRPS28-206ENST00000520946 PICALMQ13492 652 aa14.3□□□□□ -0.12
MRPS28-206ENST00000520946 SPTY2D1Q68D10 685 aaPredicted RBP14.3□□□□□ -0.12
MRPS28-206ENST00000520946 GPAT2Q6NUI2 795 aa14.3□□□□□ -0.12
MRPS28-206ENST00000520946 DEFB118Q96PH6 123 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms